Started by upstream project "BIOFORMATS-test-repo" build number 117 originally caused by: Started by upstream project "Trigger" build number 134 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins10488699408762640236.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18189_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:24:08,615 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:24:08,617 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 01:24:08,617 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:24:08,618 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:24:08,619 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:24:08,620 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:24:08,620 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:24:08,620 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:24:08,621 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:24:08,621 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:24:08,622 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:24:08,622 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:24:08,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:24:08,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:24:08,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:24:08,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:24:08,843 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:24:08,843 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:24:08,843 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:24:08,844 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:24:08,844 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 01:24:08,845 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 01:24:08,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 224 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-11 01:24:08,855] [main] java.version = 21 [testng] 01:24:08,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:24:08,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:08,904 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-11_01-24-08.log] [testng] 01:24:08,905 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-07-11 01:24:08,907] [main] testng.directory = /data [testng] [2024-07-11 01:24:08,908] [main] testng.configDirectory = /config [testng] [2024-07-11 01:24:08,917] [main] testng.multiplier = 1.0 [testng] [2024-07-11 01:24:08,918] [main] testng.in-memory = false [testng] [2024-07-11 01:24:08,918] [main] testng.allow-missing = false [testng] [2024-07-11 01:24:08,918] [main] user.language = en [testng] [2024-07-11 01:24:08,919] [main] user.country = ${user.country} [testng] [2024-07-11 01:24:08,919] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-11 01:24:19,398] [main] ---------------------------------------- [testng] [2024-07-11 01:24:19,398] [main] Total files: 4426 [testng] [2024-07-11 01:24:19,399] [main] Scan time: 10.479 s (2 ms/file) [testng] [2024-07-11 01:24:19,400] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-11 01:26:10,180] [pool-1-thread-1] Initializing /data/kevino/_BF_00003.tif: [testng] 01:26:10,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:26:10,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:10,183 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-11_01-26-10.log] [testng] 01:26:10,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bddc5ee - End of configuration. [testng] [2024-07-11 01:26:10,261] [pool-1-thread-12] Initializing /data/big-images/8kx8k.tif: [testng] 01:26:10,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:26:10,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:10,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-11_01-26-10.log] [testng] 01:26:10,262 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bc37038 - End of configuration. [testng] [2024-07-11 01:26:10,329] [pool-1-thread-11] Initializing /data/public/libtiff/quad-tile.tif: [testng] 01:26:10,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:26:10,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:10,330 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-11_01-26-10.log] [testng] 01:26:10,330 |-INFO in ch.qos.logback.core.sift.SiftProcessor@437f807a - End of configuration. [testng] [2024-07-11 01:26:10,357] [pool-1-thread-10] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] 01:26:10,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:26:10,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:10,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-11_01-26-10.log] [testng] 01:26:10,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a461d39 - End of configuration. [testng] [2024-07-11 01:26:12,730] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] 01:26:12,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:26:12,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:12,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-11_01-26-12.log] [testng] 01:26:12,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@509e1a7d - End of configuration. [testng] [2024-07-11 01:26:12,786] [pool-1-thread-8] Initializing /data/josiah/cell-Z2.C0.tiff: [testng] 01:26:12,787 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:26:12,787 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:12,787 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-11_01-26-12.log] [testng] 01:26:12,788 |-INFO in ch.qos.logback.core.sift.SiftProcessor@426fda3a - End of configuration. [testng] [2024-07-11 01:26:12,830] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] 01:26:12,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:26:12,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:12,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-11_01-26-12.log] [testng] 01:26:12,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@334ca40c - End of configuration. [testng] [2024-07-11 01:26:12,860] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] 01:26:12,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:26:12,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:12,861 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-11_01-26-12.log] [testng] 01:26:12,861 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d1430b7 - End of configuration. [testng] [2024-07-11 01:26:12,894] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] 01:26:12,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:26:12,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:12,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-11_01-26-12.log] [testng] 01:26:12,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cdd944 - End of configuration. [testng] [2024-07-11 01:26:12,929] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z014.tif: [testng] 01:26:12,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:26:12,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:12,930 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-11_01-26-12.log] [testng] 01:26:12,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c9a6c6 - End of configuration. [testng] [2024-07-11 01:26:12,979] [pool-1-thread-3] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] 01:26:12,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:26:12,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:12,980 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-11_01-26-12.log] [testng] 01:26:12,980 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f723e1b - End of configuration. [testng] [2024-07-11 01:26:13,010] [pool-1-thread-2] Initializing /data/curtis/images24.tiff: [testng] 01:26:13,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:26:13,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:13,011 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-11_01-26-13.log] [testng] 01:26:13,012 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f6d6742 - End of configuration. [testng] [2024-07-11 01:26:15,569] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-07-11 01:26:15,596] [pool-1-thread-6] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-07-11 01:26:15,667] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs003.TIF: [testng] [2024-07-11 01:26:15,736] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-07-11 01:26:15,763] [pool-1-thread-4] Initializing /data/qa-4833/cjw_tiffs/23273992_Figure 6_NA_NA_22159.TIF: [testng] [2024-07-11 01:26:15,809] [pool-1-thread-2] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] [2024-07-11 01:26:15,849] [pool-1-thread-3] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-07-11 01:26:15,878] [pool-1-thread-8] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-07-11 01:26:16,017] [pool-1-thread-1] Initializing /data/brian/Alx-488-pk.tif: [testng] [2024-07-11 01:26:16,128] [pool-1-thread-9] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-07-11 01:26:16,591] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z030.tif: [testng] [2024-07-11 01:26:16,725] [pool-1-thread-11] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-07-11 01:26:16,832] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-32.tiff: [testng] [2024-07-11 01:26:16,859] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-07-11 01:26:16,915] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-07-11 01:26:16,948] [pool-1-thread-9] Initializing /data/wayne/apple.tif: [testng] [2024-07-11 01:26:16,974] [pool-1-thread-2] Initializing /data/curtis/tubhiswt-5D.tif: [testng] [2024-07-11 01:26:17,375] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-07-11 01:26:19,529] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-07-11 01:26:19,572] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-07-11 01:26:19,593] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-07-11 01:26:19,722] [pool-1-thread-9] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-07-11 01:26:19,769] [pool-1-thread-8] Initializing /data/public/condensation/A1.pattern1.tif: [testng] [2024-07-11 01:26:20,103] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z060.tif: [testng] [2024-07-11 01:26:20,195] [pool-1-thread-2] Initializing /data/julien/RobertOrti.TIF: [testng] [2024-07-11 01:26:20,251] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-07-11 01:26:20,317] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-07-11 01:26:20,481] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z003.tif: [testng] [2024-07-11 01:26:20,723] [pool-1-thread-11] Initializing /data/christine/Image5D_4color test stack/test stack.tif: [testng] [2024-07-11 01:26:20,770] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-07-11 01:26:20,797] [pool-1-thread-9] Initializing /data/julien/EmmanuelVignalchewingfraise.TIF: [testng] [2024-07-11 01:26:20,836] [pool-1-thread-3] Initializing /data/jayne/Zst_76/WTZER_Series76_z000_ch00.tif: [testng] [2024-07-11 01:26:20,967] [pool-1-thread-8] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-07-11 01:26:21,005] [pool-1-thread-6] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-07-11 01:26:21,559] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z029.tif: [testng] [2024-07-11 01:26:21,740] [pool-1-thread-2] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-07-11 01:26:21,874] [pool-1-thread-1] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-11 01:26:21,930] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x64.tiff: [testng] [2024-07-11 01:26:22,028] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z001.tif: [testng] [2024-07-11 01:26:22,050] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] [2024-07-11 01:26:22,081] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-07-11 01:26:22,148] [pool-1-thread-4] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-07-11 01:26:22,298] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-07-11 01:26:22,505] [pool-1-thread-1] Initializing /data/josiah/cell-Z9.C1.tiff: [testng] [2024-07-11 01:26:22,558] [pool-1-thread-2] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-07-11 01:26:22,605] [pool-1-thread-11] Initializing 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Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-07-11 01:28:02,051] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-07-11 01:28:02,322] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x48.tiff: [testng] [2024-07-11 01:28:02,351] [pool-1-thread-5] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-07-11 01:28:02,604] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-07-11 01:28:02,722] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-07-11 01:28:03,112] [pool-1-thread-4] Initializing /data/misc/before 1_C2_TP1.tiff: [testng] [2024-07-11 01:28:03,486] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z008.tif: [testng] [2024-07-11 01:28:03,542] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] 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01:28:04,634] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z037.tif: [testng] [2024-07-11 01:28:04,652] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-07-11 01:28:04,844] [pool-1-thread-9] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-07-11 01:28:04,955] [pool-1-thread-10] Initializing /data/ascb/FND-25a_PaladeGroupLabeled_4800.tif: [testng] [2024-07-11 01:28:07,064] [pool-1-thread-12] Initializing /data/ascb/FND-11_PorterPaladeEarly_4800.tif: [testng] [2024-07-11 01:28:07,127] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-07-11 01:28:07,534] [pool-1-thread-5] Initializing /data/public/condensation/A10.pattern5.tif: [testng] [2024-07-11 01:28:07,636] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips_fourteen.tiff: [testng] [2024-07-11 01:28:07,787] [pool-1-thread-6] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] 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[2024-07-11 01:28:08,724] [pool-1-thread-9] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-07-11 01:28:08,991] [pool-1-thread-5] Initializing /data/tamjid/Image_843.tif: [testng] [2024-07-11 01:28:09,209] [pool-1-thread-4] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-07-11 01:28:09,331] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x32.tiff: [testng] [2024-07-11 01:28:09,542] [pool-1-thread-9] Initializing /data/ascb/CYT-90_PasolliMousePanoramic_4800.tif: [testng] [2024-07-11 01:28:09,583] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-07-11 01:28:09,714] [pool-1-thread-6] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-07-11 01:28:10,343] [pool-1-thread-4] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-07-11 01:28:10,393] [pool-1-thread-1] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-07-11 01:28:10,699] [pool-1-thread-6] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-07-11 01:28:10,827] [pool-1-thread-7] Initializing /data/big-images/2kx2k.tif: [testng] [2024-07-11 01:28:11,203] [pool-1-thread-6] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-07-11 01:28:11,692] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] [2024-07-11 01:28:11,873] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-07-11 01:28:12,003] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x64.tiff: [testng] [2024-07-11 01:28:12,242] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-11 01:28:12,312] [pool-1-thread-8] Initializing /data/curtis/blastocyste.tif: [testng] [2024-07-11 01:28:12,749] [pool-1-thread-4] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-07-11 01:28:12,941] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-07-11 01:28:13,114] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-07-11 01:28:13,196] [pool-1-thread-8] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-07-11 01:28:13,247] [pool-1-thread-4] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-07-11 01:28:13,526] [pool-1-thread-12] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-07-11 01:28:13,557] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-07-11 01:28:13,784] [pool-1-thread-4] Initializing /data/michael/MFISH.tiff: [testng] [2024-07-11 01:28:13,911] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-07-11 01:28:13,934] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-07-11 01:28:14,063] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-07-11 01:28:14,387] [pool-1-thread-12] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-07-11 01:28:15,964] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-07-11 01:28:16,019] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0220.TIF: [testng] [2024-07-11 01:28:16,151] [pool-1-thread-4] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-07-11 01:28:16,377] [pool-1-thread-9] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-07-11 01:28:16,791] [pool-1-thread-2] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-07-11 01:28:16,856] [pool-1-thread-7] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-07-11 01:28:17,010] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-07-11 01:28:17,110] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-07-11 01:28:17,230] [pool-1-thread-9] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-07-11 01:28:17,307] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-07-11 01:28:17,338] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-07-11 01:28:17,445] [pool-1-thread-8] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-07-11 01:28:17,629] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-07-11 01:28:17,675] [pool-1-thread-9] Initializing /data/samples/cielab/Ski_TC8-03_ROMM.tif: [testng] [2024-07-11 01:28:17,973] [pool-1-thread-4] Initializing /data/ascb/FND-22_FawcettLongitudinalMammalian_4800.tif: [testng] [2024-07-11 01:28:18,397] [pool-1-thread-2] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-07-11 01:28:18,665] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z014.tif: [testng] [2024-07-11 01:28:18,894] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-07-11 01:28:19,031] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-07-11 01:28:19,191] [pool-1-thread-2] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-07-11 01:28:19,335] [pool-1-thread-7] Initializing /data/big-images/4kx4k.tif: [testng] [2024-07-11 01:28:19,659] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z044.tif: [testng] [2024-07-11 01:28:19,885] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-07-11 01:28:20,692] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-07-11 01:28:21,184] [pool-1-thread-2] Initializing /data/alexa/test4.tif: [testng] [2024-07-11 01:28:21,513] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-07-11 01:28:21,552] [pool-1-thread-8] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-07-11 01:28:22,042] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-07-11 01:28:22,330] [pool-1-thread-5] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-07-11 01:28:22,574] [pool-1-thread-2] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-07-11 01:28:22,986] [pool-1-thread-5] Initializing /data/stephane/001_z01.tif: [testng] [2024-07-11 01:28:23,941] [pool-1-thread-6] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-07-11 01:28:24,245] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-07-11 01:28:24,443] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] [2024-07-11 01:28:24,541] [pool-1-thread-6] Initializing /data/jcb/SuppFig5D.tif: [testng] [2024-07-11 01:28:24,791] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-07-11 01:28:24,904] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-07-11 01:28:24,936] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] [2024-07-11 01:28:25,098] [pool-1-thread-4] Initializing /data/ascb/bad/FND-20_FawcettLongitudinalMidpieces_4800.tif: [testng] [2024-07-11 01:28:25,376] [pool-1-thread-8] Initializing /data/qa-20514/819_2.tif: [testng] [2024-07-11 01:28:25,432] [pool-1-thread-5] Initializing /data/josiah/cell-Z31.C0.tiff: [testng] [2024-07-11 01:28:25,933] [pool-1-thread-5] Initializing /data/josh/NESb_C2_TP9.tiff: [testng] [2024-07-11 01:28:26,094] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-07-11 01:28:26,311] [pool-1-thread-6] Initializing /data/julien/AVECCHRO.TIF: [testng] [2024-07-11 01:28:26,349] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-07-11 01:28:26,475] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z013.tif: [testng] [2024-07-11 01:28:26,669] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] [2024-07-11 01:28:26,781] [pool-1-thread-6] Initializing /data/julien/CRBMquadtour.tif: [testng] [2024-07-11 01:28:31,318] [pool-1-thread-5] Initializing /data/public/libtiff/caspian.tif: [testng] [2024-07-11 01:28:31,354] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x16.tiff: [testng] [2024-07-11 01:28:31,558] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] [2024-07-11 01:28:31,596] [pool-1-thread-8] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-07-11 01:28:31,708] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0240.TIF: [testng] [2024-07-11 01:28:31,802] [pool-1-thread-5] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-07-11 01:28:31,901] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-07-11 01:28:32,090] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-07-11 01:28:32,125] [pool-1-thread-11] Initializing /data/jae/first image.tif: [testng] [2024-07-11 01:28:32,193] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0225.TIF: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 18 seconds Finished: SUCCESS