Started by upstream project "BIOFORMATS-test-repo" build number 118
originally caused by:
Started by upstream project "Trigger" build number 135
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins11507418095865331617.sh
+ '[' targa = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_18379_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:28:32,759 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:28:32,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:28:32,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:28:32,762 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:28:32,762 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:28:32,762 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:28:32,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:28:32,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:28:32,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:28:32,763 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:28:32,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:28:32,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:28:32,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:28:32,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:28:33,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:28:33,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:28:33,023 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:28:33,023 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:28:33,023 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:28:33,024 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:28:33,024 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:28:33,025 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:28:33,025 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 262 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-12 01:28:33,035] [main] java.version = 1.8.0_342
[testng] 01:28:33,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:28:33,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:33,083 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-12_01-28-33.log]
[testng] 01:28:33,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-12 01:28:33,086] [main] testng.directory = /data
[testng] [2024-07-12 01:28:33,086] [main] testng.configDirectory = /config
[testng] [2024-07-12 01:28:33,098] [main] testng.multiplier = 1.0
[testng] [2024-07-12 01:28:33,098] [main] testng.in-memory = false
[testng] [2024-07-12 01:28:33,098] [main] testng.allow-missing = false
[testng] [2024-07-12 01:28:33,098] [main] user.language = en
[testng] [2024-07-12 01:28:33,098] [main] user.country = ${user.country}
[testng] [2024-07-12 01:28:33,098] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-12 01:28:33,511] [main] ----------------------------------------
[testng] [2024-07-12 01:28:33,512] [main] Total files: 21
[testng] [2024-07-12 01:28:33,512] [main] Scan time: 0.413 s (19 ms/file)
[testng] [2024-07-12 01:28:33,512] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-12 01:28:35,204] [pool-1-thread-1] Initializing /data/samples/UTC16.TGA:
[testng] 01:28:35,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:28:35,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-12_01-28-35.log]
[testng] 01:28:35,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a0d38dc - End of configuration.
[testng] [2024-07-12 01:28:35,227] [pool-1-thread-12] Initializing /data/samples/UBW8.TGA:
[testng] 01:28:35,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:28:35,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,229 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-12_01-28-35.log]
[testng] 01:28:35,230 |-INFO in ch.qos.logback.core.sift.SiftProcessor@617d4ac4 - End of configuration.
[testng] [2024-07-12 01:28:35,271] [pool-1-thread-11] Initializing /data/samples/XING_T24.TGA:
[testng] 01:28:35,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:28:35,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-12_01-28-35.log]
[testng] 01:28:35,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62b9048c - End of configuration.
[testng] [2024-07-12 01:28:35,281] [pool-1-thread-10] Initializing /data/samples/FLAG_T32.TGA:
[testng] 01:28:35,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:28:35,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,282 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-12_01-28-35.log]
[testng] 01:28:35,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32f1b20 - End of configuration.
[testng] [2024-07-12 01:28:35,293] [pool-1-thread-9] Initializing /data/samples/FLAG_B32.TGA:
[testng] 01:28:35,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:28:35,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,294 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-12_01-28-35.log]
[testng] 01:28:35,294 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6897c46b - End of configuration.
[testng] [2024-07-12 01:28:35,304] [pool-1-thread-8] Initializing /data/samples/CTC24.TGA:
[testng] 01:28:35,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:28:35,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,305 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-12_01-28-35.log]
[testng] 01:28:35,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e805a3 - End of configuration.
[testng] [2024-07-12 01:28:35,316] [pool-1-thread-7] Initializing /data/samples/XING_B24.TGA:
[testng] 01:28:35,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:28:35,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,318 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-12_01-28-35.log]
[testng] 01:28:35,319 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ccee1f5 - End of configuration.
[testng] [2024-07-12 01:28:35,330] [pool-1-thread-6] Initializing /data/samples/CTC16.TGA:
[testng] 01:28:35,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:28:35,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,331 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-12_01-28-35.log]
[testng] 01:28:35,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26b09b2 - End of configuration.
[testng] [2024-07-12 01:28:35,340] [pool-1-thread-5] Initializing /data/samples/FLAG_T16.TGA:
[testng] 01:28:35,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:28:35,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-12_01-28-35.log]
[testng] 01:28:35,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7717f9e4 - End of configuration.
[testng] [2024-07-12 01:28:35,352] [pool-1-thread-4] Initializing /data/samples/FLAG_B24.TGA:
[testng] 01:28:35,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:28:35,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,354 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-12_01-28-35.log]
[testng] 01:28:35,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@755508aa - End of configuration.
[testng] [2024-07-12 01:28:35,373] [pool-1-thread-3] Initializing /data/samples/XING_T32.TGA:
[testng] 01:28:35,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:28:35,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-12_01-28-35.log]
[testng] 01:28:35,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5eefcd3d - End of configuration.
[testng] [2024-07-12 01:28:35,400] [pool-1-thread-2] Initializing /data/samples/CBW8.TGA:
[testng] 01:28:35,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:28:35,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:35,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-12_01-28-35.log]
[testng] 01:28:35,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13db8294 - End of configuration.
[testng] [2024-07-12 01:28:37,062] [pool-1-thread-4] Initializing /data/samples/XING_B32.TGA:
[testng] [2024-07-12 01:28:37,070] [pool-1-thread-8] Initializing /data/samples/MARBLES.TGA:
[testng] [2024-07-12 01:28:37,085] [pool-1-thread-6] Initializing /data/samples/CCM8.TGA:
[testng] [2024-07-12 01:28:37,093] [pool-1-thread-5] Initializing /data/samples/XING_T16.TGA:
[testng] [2024-07-12 01:28:37,101] [pool-1-thread-10] Initializing /data/samples/UTC32.TGA:
[testng] [2024-07-12 01:28:37,112] [pool-1-thread-9] Initializing /data/samples/XING_B16.TGA:
[testng] [2024-07-12 01:28:37,120] [pool-1-thread-11] Initializing /data/samples/UCM8.TGA:
[testng] [2024-07-12 01:28:37,127] [pool-1-thread-7] Initializing /data/samples/UTC24.TGA:
[testng] [2024-07-12 01:28:37,135] [pool-1-thread-3] Initializing /data/samples/FLAG_B16.TGA:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 8 seconds
Finished: SUCCESS