Started by upstream project "BIOFORMATS-test-repo" build number 118
originally caused by:
Started by upstream project "Trigger" build number 135
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins14908428703879101752.sh
+ '[' pict = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_18392_merge_ci -v /uod/idr/repos/curated/pict:/data -v /uod/idr-scratch/merge-ci/curated/pict:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:32:21,434 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:32:21,436 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:32:21,436 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:32:21,437 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:32:21,437 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:32:21,437 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:32:21,438 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:32:21,438 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:32:21,438 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:32:21,438 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:32:21,438 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:32:21,439 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:32:21,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:32:21,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:32:21,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:32:21,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:32:21,710 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:32:21,710 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:32:21,710 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:32:21,711 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:32:21,711 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:32:21,712 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:32:21,712 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 274 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-12 01:32:21,722] [main] java.version = 1.8.0_342
[testng] 01:32:21,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:32:21,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:21,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-12_01-32-21.log]
[testng] 01:32:21,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-12 01:32:21,777] [main] testng.directory = /data
[testng] [2024-07-12 01:32:21,777] [main] testng.configDirectory = /config
[testng] [2024-07-12 01:32:21,790] [main] testng.multiplier = 1.0
[testng] [2024-07-12 01:32:21,790] [main] testng.in-memory = false
[testng] [2024-07-12 01:32:21,790] [main] testng.allow-missing = false
[testng] [2024-07-12 01:32:21,790] [main] user.language = en
[testng] [2024-07-12 01:32:21,790] [main] user.country = ${user.country}
[testng] [2024-07-12 01:32:21,791] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-12 01:32:22,211] [main] ----------------------------------------
[testng] [2024-07-12 01:32:22,211] [main] Total files: 25
[testng] [2024-07-12 01:32:22,211] [main] Scan time: 0.42 s (16 ms/file)
[testng] [2024-07-12 01:32:22,211] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 25 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-12 01:32:23,848] [pool-1-thread-1] Initializing /data/brian/images/BLU.PCT:
[testng] 01:32:23,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:32:23,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:23,849 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-12_01-32-23.log]
[testng] 01:32:23,849 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6137eb76 - End of configuration.
[testng] [2024-07-12 01:32:23,886] [pool-1-thread-12] Initializing /data/brian/images/TRU256.PCT:
[testng] 01:32:23,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:32:23,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:23,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-12_01-32-23.log]
[testng] 01:32:23,888 |-INFO in ch.qos.logback.core.sift.SiftProcessor@205ca225 - End of configuration.
[testng] [2024-07-12 01:32:23,900] [pool-1-thread-11] Initializing /data/brian/images/FLAG_B32_COMPRESSED.pct:
[testng] 01:32:23,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:32:23,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:23,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-12_01-32-23.log]
[testng] 01:32:23,902 |-INFO in ch.qos.logback.core.sift.SiftProcessor@777111c7 - End of configuration.
[testng] [2024-07-12 01:32:23,909] [pool-1-thread-10] Initializing /data/brian/images/FLAG_B32.pct:
[testng] 01:32:23,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:32:23,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:23,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-12_01-32-23.log]
[testng] 01:32:23,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34ca757f - End of configuration.
[testng] [2024-07-12 01:32:23,926] [pool-1-thread-9] Initializing /data/brian/images/MARBLES_B32.pct:
[testng] 01:32:23,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:32:23,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:23,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-12_01-32-23.log]
[testng] 01:32:23,927 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30735c5b - End of configuration.
[testng] [2024-07-12 01:32:24,095] [pool-1-thread-8] Initializing /data/jqd/sixteenBit.pict:
[testng] 01:32:24,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:32:24,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:24,096 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-12_01-32-24.log]
[testng] 01:32:24,097 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3207e1ac - End of configuration.
[testng] [2024-07-12 01:32:24,107] [pool-1-thread-7] Initializing /data/jqd/mire32.pict:
[testng] 01:32:24,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:32:24,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:24,108 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-12_01-32-24.log]
[testng] 01:32:24,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22cbb6ac - End of configuration.
[testng] [2024-07-12 01:32:24,118] [pool-1-thread-6] Initializing /data/jqd/mireSixteen.pict:
[testng] 01:32:24,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:32:24,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:24,119 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-12_01-32-24.log]
[testng] 01:32:24,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c443043 - End of configuration.
[testng] [2024-07-12 01:32:24,127] [pool-1-thread-5] Initializing /data/wayne/PotatoMeristem.pict:
[testng] 01:32:24,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:32:24,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:24,127 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-12_01-32-24.log]
[testng] 01:32:24,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50d824cc - End of configuration.
[testng] [2024-07-12 01:32:24,170] [pool-1-thread-4] Initializing /data/brian/images/BLK.PCT:
[testng] 01:32:24,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:32:24,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:24,171 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-12_01-32-24.log]
[testng] 01:32:24,171 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5249043a - End of configuration.
[testng] [2024-07-12 01:32:24,193] [pool-1-thread-3] Initializing /data/brian/images/YEL.PCT:
[testng] 01:32:24,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:32:24,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:24,194 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-12_01-32-24.log]
[testng] 01:32:24,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6188c4d3 - End of configuration.
[testng] [2024-07-12 01:32:24,226] [pool-1-thread-2] Initializing /data/brian/images/RED.PCT:
[testng] 01:32:24,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:32:24,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:24,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-12_01-32-24.log]
[testng] 01:32:24,227 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3168b5ad - End of configuration.
[testng] [2024-07-12 01:32:25,755] [pool-1-thread-7] Initializing /data/jqd/32bit.pict:
[testng] [2024-07-12 01:32:25,774] [pool-1-thread-10] Initializing /data/misc/planet2.pict:
[testng] [2024-07-12 01:32:25,793] [pool-1-thread-6] Initializing /data/misc/planet.pict:
[testng] [2024-07-12 01:32:25,817] [pool-1-thread-11] Initializing /data/brian/images/FLAG_RGB.pct:
[testng] [2024-07-12 01:32:25,823] [pool-1-thread-12] Initializing /data/brian/images/FLAG_B24.PCT:
[testng] [2024-07-12 01:32:25,841] [pool-1-thread-8] Initializing /data/brian/images/MARBLES_B32_COMPRESSED.pct:
[testng] [2024-07-12 01:32:25,857] [pool-1-thread-1] Initializing /data/brian/images/MARBLES_RGB.pct:
[testng] [2024-07-12 01:32:25,882] [pool-1-thread-2] Initializing /data/brian/images/VENUS.pct:
[testng] [2024-07-12 01:32:25,901] [pool-1-thread-3] Initializing /data/misc/planet.png:
[testng] [2024-07-12 01:32:25,905] [pool-1-thread-4] Initializing /data/misc/swlogo.pict:
[testng] [2024-07-12 01:32:25,971] [pool-1-thread-5] Initializing /data/brian/images/GRN.PCT:
[testng] [2024-07-12 01:32:26,406] [pool-1-thread-11] Initializing /data/brian/images/MARBLES_B24.PCT:
[testng] [2024-07-12 01:32:26,593] [pool-1-thread-12] Initializing /data/brian/images/WHT.PCT:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1325, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 seconds
Finished: SUCCESS