Started by upstream project "BIOFORMATS-test-repo" build number 12
originally caused by:
 Started by upstream project "Trigger" build number 15
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1553089989025715837.sh
+ '[' avi = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_1860_merge_ci -v /uod/idr/repos/curated/avi:/data -v /uod/idr-scratch/merge-ci/curated/avi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:15:43,007 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:15:43,009 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:15:43,009 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:15:43,010 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:15:43,011 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:15:43,011 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:15:43,011 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:15:43,011 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:15:43,012 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:15:43,012 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:15:43,013 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:15:43,013 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:15:43,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:15:43,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:15:43,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:15:43,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:15:43,303 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:15:43,303 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:15:43,303 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:15:43,304 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:15:43,304 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:15:43,305 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:15:43,305 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 293 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-03-26 01:15:43,319] [main] java.version = 11.0.16
   [testng] 01:15:43,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:15:43,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:15:43,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-26_01-15-43.log]
   [testng] 01:15:43,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-03-26 01:15:43,416] [main] testng.directory = /data
   [testng] [2024-03-26 01:15:43,417] [main] testng.configDirectory = /config
   [testng] [2024-03-26 01:15:43,507] [main] testng.multiplier = 1.0
   [testng] [2024-03-26 01:15:43,508] [main] testng.in-memory = false
   [testng] [2024-03-26 01:15:43,509] [main] testng.allow-missing = false
   [testng] [2024-03-26 01:15:43,509] [main] user.language = en
   [testng] [2024-03-26 01:15:43,509] [main] user.country = ${user.country}
   [testng] [2024-03-26 01:15:43,509] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-03-26 01:15:45,251] [main] ----------------------------------------
   [testng] [2024-03-26 01:15:45,251] [main] Total files: 40
   [testng] [2024-03-26 01:15:45,252] [main] Scan time: 1.742 s (43 ms/file)
   [testng] [2024-03-26 01:15:45,252] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 38 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-03-26 01:19:24,622] [pool-1-thread-1] Initializing /data/kurt/63x_6um.avi: 
   [testng] 01:19:24,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:19:24,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:24,625 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-26_01-19-24.log]
   [testng] 01:19:24,626 |-INFO in ch.qos.logback.core.sift.SiftProcessor@584461dd - End of configuration.
   [testng] [2024-03-26 01:19:24,720] [pool-1-thread-12] Initializing /data/ascb/TIRF.avi: 
   [testng] 01:19:24,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:19:24,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:24,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-26_01-19-24.log]
   [testng] 01:19:24,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70df1f1e - End of configuration.
   [testng] [2024-03-26 01:19:25,163] [pool-1-thread-11] Initializing /data/curtis/mri-stack-ij-new.avi: 
   [testng] 01:19:25,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:19:25,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:25,164 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-26_01-19-25.log]
   [testng] 01:19:25,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2adc064 - End of configuration.
   [testng] [2024-03-26 01:19:25,212] [pool-1-thread-10] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_5.avi: 
   [testng] 01:19:25,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:19:25,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:25,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-26_01-19-25.log]
   [testng] 01:19:25,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55b03661 - End of configuration.
   [testng] [2024-03-26 01:19:25,334] [pool-1-thread-9] Initializing /data/qa-7450/MVI_3610.AVI: 
   [testng] 01:19:25,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:19:25,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:25,336 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-26_01-19-25.log]
   [testng] 01:19:25,336 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f5597f5 - End of configuration.
   [testng] [2024-03-26 01:19:25,401] [pool-1-thread-8] Initializing /data/roger/spheroid1-crop.lsm movie 2.avi: 
   [testng] 01:19:25,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:19:25,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:25,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-26_01-19-25.log]
   [testng] 01:19:25,402 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78be4bcc - End of configuration.
   [testng] [2024-03-26 01:19:25,490] [pool-1-thread-7] Initializing /data/chip_avi/Level002-DB-090.avi: 
   [testng] 01:19:25,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:19:25,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:25,491 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-26_01-19-25.log]
   [testng] 01:19:25,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71b008c - End of configuration.
   [testng] [2024-03-26 01:19:25,524] [pool-1-thread-6] Initializing /data/jules/GUV_long15N_10_10mb_debut_26102011_4.avi: 
   [testng] 01:19:25,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:19:25,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:19:25,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-26_01-19-25.log]
   [testng] 01:19:25,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@178552de - End of configuration.
   [testng] [2024-03-26 01:20:21,060] [pool-1-thread-5] Initializing /data/qa-5019/nemo-2_1_.avi: 
   [testng] 01:20:21,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:20:21,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:20:21,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-26_01-20-21.log]
   [testng] 01:20:21,063 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35b4d601 - End of configuration.
   [testng] [2024-03-26 01:20:21,184] [pool-1-thread-4] Initializing /data/pki/yinghua_USPI2-ASMKT772_111017100001_C10_f1.avi: 
   [testng] 01:20:21,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:20:21,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:20:21,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-26_01-20-21.log]
   [testng] 01:20:21,186 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a015a1a - End of configuration.
   [testng] [2024-03-26 01:20:21,317] [pool-1-thread-3] Initializing /data/chris/APZ04_009.avi: 
   [testng] 01:20:21,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:20:21,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:20:21,318 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-26_01-20-21.log]
   [testng] 01:20:21,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@346e2887 - End of configuration.
   [testng] [2024-03-26 01:20:25,272] [pool-1-thread-2] Initializing /data/simon/24_bit_problem.avi: 
   [testng] 01:20:25,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:20:25,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:20:25,273 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-26_01-20-25.log]
   [testng] 01:20:25,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ffc23ab - End of configuration.
   [testng] [2024-03-26 01:20:27,244] [pool-1-thread-10] Initializing /data/roger/op9middle40x.lsm movie.avi: 
   [testng] [2024-03-26 01:20:27,344] [pool-1-thread-11] Initializing /data/curtis/mri-stack-ij-old.avi: 
   [testng] [2024-03-26 01:20:27,674] [pool-1-thread-7] Initializing /data/prairie/cornea dc and macs.AVI: 
   [testng] [2024-03-26 01:20:27,731] [pool-1-thread-12] Initializing /data/qa-4232/11051920xdrywithincubatoronthenoff_Subset.avi: 
   [testng] [2024-03-26 01:20:27,840] [pool-1-thread-2] Initializing /data/william/worm.avi: 
   [testng] [2024-03-26 01:20:27,932] [pool-1-thread-5] Initializing /data/roger/spheroid1-crop.lsm movie.avi: 
   [testng] [2024-03-26 01:20:28,018] [pool-1-thread-9] Initializing /data/chip_avi/Level001-ES-083.avi: 
   [testng] [2024-03-26 01:20:28,116] [pool-1-thread-4] Initializing /data/kurt/40x_6um_2.avi: 
   [testng] [2024-03-26 01:20:28,257] [pool-1-thread-8] Initializing /data/roger/op9middle40x.lsm movie 3.avi: 
   [testng] [2024-03-26 01:20:28,793] [pool-1-thread-1] Initializing /data/roger/op9middle40x.lsm movie 4.avi: 
   [testng] [2024-03-26 01:20:28,965] [pool-1-thread-11] Initializing /data/qa-11011/M-flow10001.avi: 
   [testng] [2024-03-26 01:20:29,219] [pool-1-thread-2] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_3.avi: 
   [testng] [2024-03-26 01:20:29,327] [pool-1-thread-10] Initializing /data/kurt/40x_6um.avi: 
   [testng] [2024-03-26 01:20:29,469] [pool-1-thread-12] Initializing /data/jae/20xD_5minfor14h.avi: 
   [testng] [2024-03-26 01:20:30,061] [pool-1-thread-7] Initializing /data/roger/spheroid1.lsm movie.avi: 
   [testng] [2024-03-26 01:20:30,284] [pool-1-thread-9] Initializing /data/roger/op9middle40x.lsm movie 2.avi: 
   [testng] [2024-03-26 01:20:30,638] [pool-1-thread-5] Initializing /data/sample-avis/extra-chunk/HyperStack.avi: 
   [testng] [2024-03-26 01:20:30,715] [pool-1-thread-8] Initializing /data/qa-5019/nemo-2_10_20.avi: 
   [testng] [2024-03-26 01:20:30,812] [pool-1-thread-2] Initializing /data/jules/GUV_long15N_10_20mb_debut_25102011_1_BW.avi: 
   [testng] [2024-03-26 01:20:30,968] [pool-1-thread-1] Initializing /data/curtis/mri-stack-bf.avi: 
   [testng] [2024-03-26 01:20:31,054] [pool-1-thread-4] Initializing /data/qa-7336/2X_63X-DAPI-Emilin2_Filter_Render_Series.avi: 
   [testng] [2024-03-26 01:20:31,467] [pool-1-thread-11] Initializing /data/chip_avi/Level003-DB-089.avi: 
   [testng] [2024-03-26 01:20:31,638] [pool-1-thread-5] Initializing /data/chip_avi/Level004-WA-116.avi: 
   [testng] [2024-03-26 01:20:31,768] [pool-1-thread-10] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_4.avi: 
   [testng] [2024-03-26 01:20:31,905] [pool-1-thread-9] Initializing /data/sample-avis/rgb-odd-width/HyperStack.avi: 
   [testng] [2024-03-26 01:20:31,982] [pool-1-thread-7] Initializing /data/qa-7560/Ex9 ALADIN WT KO KI_DIC_ 31_07_2013_M1.avi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 2014, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 5 minutes 3 seconds
Finished: SUCCESS