Started by upstream project "BIOFORMATS-test-repo" build number 121 originally caused by: Started by upstream project "Trigger" build number 138 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins17333884008466089393.sh + '[' apng = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_18960_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:19:09,014 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:19:09,016 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 02:19:09,016 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:19:09,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:19:09,017 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:19:09,017 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:19:09,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:19:09,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:19:09,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:19:09,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:19:09,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:19:09,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:19:09,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:19:09,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:19:09,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:19:09,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:19:09,393 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:19:09,393 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:19:09,393 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:19:09,394 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:19:09,394 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 02:19:09,395 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 02:19:09,395 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 377 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-15 02:19:09,405] [main] java.version = 1.8.0_342 [testng] 02:19:09,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:19:09,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:09,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-15_02-19-09.log] [testng] 02:19:09,468 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-15 02:19:09,470] [main] testng.directory = /data [testng] [2024-07-15 02:19:09,471] [main] testng.configDirectory = /config [testng] [2024-07-15 02:19:09,485] [main] testng.multiplier = 1.0 [testng] [2024-07-15 02:19:09,485] [main] testng.in-memory = false [testng] [2024-07-15 02:19:09,485] [main] testng.allow-missing = false [testng] [2024-07-15 02:19:09,485] [main] user.language = fr [testng] [2024-07-15 02:19:09,485] [main] user.country = FR [testng] [2024-07-15 02:19:09,485] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-15 02:19:09,946] [main] ---------------------------------------- [testng] [2024-07-15 02:19:09,946] [main] Total files: 21 [testng] [2024-07-15 02:19:09,946] [main] Scan time: 0.461 s (21 ms/file) [testng] [2024-07-15 02:19:09,947] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-15 02:19:11,180] [pool-1-thread-1] Initializing /data/samples/Sun.png: [testng] 02:19:11,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:19:11,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,181 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-15_02-19-11.log] [testng] 02:19:11,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a7603e2 - End of configuration. [testng] [2024-07-15 02:19:11,270] [pool-1-thread-12] Initializing /data/samples/atom.png: [testng] 02:19:11,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:19:11,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-15_02-19-11.log] [testng] 02:19:11,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62533aa8 - End of configuration. [testng] [2024-07-15 02:19:11,279] [pool-1-thread-11] Initializing /data/samples/orbit.png: [testng] 02:19:11,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:19:11,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,280 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-15_02-19-11.log] [testng] 02:19:11,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b299296 - End of configuration. [testng] [2024-07-15 02:19:11,286] [pool-1-thread-10] Initializing /data/samples/monkey_apng.png: [testng] 02:19:11,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:19:11,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,287 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-15_02-19-11.log] [testng] 02:19:11,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47b19949 - End of configuration. [testng] [2024-07-15 02:19:11,294] [pool-1-thread-9] Initializing /data/qa-7473/x.png: [testng] 02:19:11,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:19:11,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-15_02-19-11.log] [testng] 02:19:11,296 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ac28d72 - End of configuration. [testng] [2024-07-15 02:19:11,304] [pool-1-thread-8] Initializing /data/samples/william_wong04.png: [testng] 02:19:11,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:19:11,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,305 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-15_02-19-11.log] [testng] 02:19:11,305 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a6d6c6 - End of configuration. [testng] [2024-07-15 02:19:11,311] [pool-1-thread-7] Initializing /data/samples/daniel_coltri_two.png: [testng] 02:19:11,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:19:11,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-15_02-19-11.log] [testng] 02:19:11,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7205bdd5 - End of configuration. [testng] [2024-07-15 02:19:11,317] [pool-1-thread-6] Initializing /data/qa-7473/n.tif: [testng] 02:19:11,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:19:11,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,317 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-15_02-19-11.log] [testng] 02:19:11,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5699662a - End of configuration. [testng] [2024-07-15 02:19:11,347] [pool-1-thread-5] Initializing /data/samples/MoonPhases.png: [testng] 02:19:11,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:19:11,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-15_02-19-11.log] [testng] 02:19:11,349 |-INFO in ch.qos.logback.core.sift.SiftProcessor@579e152e - End of configuration. [testng] [2024-07-15 02:19:11,355] [pool-1-thread-4] Initializing /data/samples/joanna_viera01.png: [testng] 02:19:11,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:19:11,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,356 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-15_02-19-11.log] [testng] 02:19:11,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16ce59d4 - End of configuration. [testng] [2024-07-15 02:19:11,360] [pool-1-thread-3] Initializing /data/samples/Matrix.png: [testng] 02:19:11,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:19:11,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-15_02-19-11.log] [testng] 02:19:11,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21d3244b - End of configuration. [testng] [2024-07-15 02:19:11,369] [pool-1-thread-2] Initializing /data/samples/phug_logo.png: [testng] 02:19:11,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:19:11,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-15_02-19-11.log] [testng] 02:19:11,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34582ed - End of configuration. [testng] [2024-07-15 02:19:12,841] [pool-1-thread-9] Initializing /data/samples/william_wong02.png: [testng] [2024-07-15 02:19:12,847] [pool-1-thread-2] Initializing /data/samples/spinfox.png: [testng] [2024-07-15 02:19:12,854] [pool-1-thread-3] Initializing /data/samples/william_wong01.png: [testng] [2024-07-15 02:19:12,861] [pool-1-thread-11] Initializing /data/samples/william_wong05.png: [testng] [2024-07-15 02:19:12,867] [pool-1-thread-8] Initializing /data/colin/test.sfstdge.png: [testng] [2024-07-15 02:19:12,870] [pool-1-thread-1] Initializing /data/samples/daniel_coltri_one.png: [testng] [2024-07-15 02:19:12,874] [pool-1-thread-12] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-07-15 02:19:12,881] [pool-1-thread-5] Initializing /data/samples/chompy2.png: [testng] [2024-07-15 02:19:12,885] [pool-1-thread-10] Initializing /data/samples/StarV838.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 9 seconds Finished: SUCCESS