Started by upstream project "BIOFORMATS-test-repo" build number 121
originally caused by:
Started by upstream project "Trigger" build number 138
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins7623722209390785515.sh
+ '[' psd = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_18966_merge_ci -v /uod/idr/repos/curated/psd:/data -v /uod/idr-scratch/merge-ci/curated/psd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:29:10,176 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:29:10,178 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 02:29:10,178 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:29:10,179 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:29:10,179 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:29:10,179 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:29:10,179 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:29:10,179 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:29:10,180 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:29:10,180 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:29:10,180 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:29:10,180 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:29:10,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:29:10,407 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:29:10,434 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:29:10,434 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:29:10,443 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:29:10,443 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:29:10,443 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:29:10,444 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:29:10,444 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 02:29:10,444 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 02:29:10,445 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 264 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-15 02:29:10,454] [main] java.version = 1.8.0_342
[testng] 02:29:10,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:29:10,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:10,507 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-15_02-29-10.log]
[testng] 02:29:10,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-15 02:29:10,511] [main] testng.directory = /data
[testng] [2024-07-15 02:29:10,511] [main] testng.configDirectory = /config
[testng] [2024-07-15 02:29:10,524] [main] testng.multiplier = 1.0
[testng] [2024-07-15 02:29:10,524] [main] testng.in-memory = false
[testng] [2024-07-15 02:29:10,524] [main] testng.allow-missing = false
[testng] [2024-07-15 02:29:10,524] [main] user.language = fr
[testng] [2024-07-15 02:29:10,524] [main] user.country = FR
[testng] [2024-07-15 02:29:10,524] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-15 02:29:10,997] [main] ----------------------------------------
[testng] [2024-07-15 02:29:10,997] [main] Total files: 18
[testng] [2024-07-15 02:29:10,997] [main] Scan time: 0.473 s (26 ms/file)
[testng] [2024-07-15 02:29:10,997] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 18 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-15 02:29:12,525] [pool-1-thread-1] Initializing /data/big-images/8kx8k.psd:
[testng] 02:29:12,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:29:12,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,527 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-15_02-29-12.log]
[testng] 02:29:12,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39f0a146 - End of configuration.
[testng] [2024-07-15 02:29:12,562] [pool-1-thread-12] Initializing /data/jcb/Fig5A_siHP16h.tif:
[testng] 02:29:12,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:29:12,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,563 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-15_02-29-12.log]
[testng] 02:29:12,564 |-INFO in ch.qos.logback.core.sift.SiftProcessor@413a4b92 - End of configuration.
[testng] [2024-07-15 02:29:12,581] [pool-1-thread-11] Initializing /data/jcb/Fig5A_sip1506h.tif:
[testng] 02:29:12,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:29:12,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,582 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-15_02-29-12.log]
[testng] 02:29:12,583 |-INFO in ch.qos.logback.core.sift.SiftProcessor@638e2205 - End of configuration.
[testng] [2024-07-15 02:29:12,601] [pool-1-thread-10] Initializing /data/qa-7632/23283078__NA_NA_27343.psd:
[testng] 02:29:12,601 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:29:12,601 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,602 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-15_02-29-12.log]
[testng] 02:29:12,602 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b9227a7 - End of configuration.
[testng] [2024-07-15 02:29:12,631] [pool-1-thread-9] Initializing /data/qa-4497/22421435_Supl Fig 4_C_Flag_12987.psd:
[testng] 02:29:12,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:29:12,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-15_02-29-12.log]
[testng] 02:29:12,633 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e979e9f - End of configuration.
[testng] [2024-07-15 02:29:12,647] [pool-1-thread-8] Initializing /data/qa-4117/caspase gel-1.psd:
[testng] 02:29:12,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:29:12,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-15_02-29-12.log]
[testng] 02:29:12,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77739f05 - End of configuration.
[testng] [2024-07-15 02:29:12,827] [pool-1-thread-7] Initializing /data/misc/glossy_buttons.psd:
[testng] 02:29:12,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:29:12,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,828 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-15_02-29-12.log]
[testng] 02:29:12,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a4171c7 - End of configuration.
[testng] [2024-07-15 02:29:12,841] [pool-1-thread-6] Initializing /data/misc/vig_drawing_1.psd:
[testng] 02:29:12,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:29:12,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-15_02-29-12.log]
[testng] 02:29:12,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34e3fd6b - End of configuration.
[testng] [2024-07-15 02:29:12,921] [pool-1-thread-5] Initializing /data/cris/house.tif:
[testng] 02:29:12,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:29:12,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,923 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-15_02-29-12.log]
[testng] 02:29:12,923 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27e86cee - End of configuration.
[testng] [2024-07-15 02:29:12,958] [pool-1-thread-4] Initializing /data/misc/smilie.psd:
[testng] 02:29:12,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:29:12,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:12,959 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-15_02-29-12.log]
[testng] 02:29:12,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cb69277 - End of configuration.
[testng] [2024-07-15 02:29:13,013] [pool-1-thread-3] Initializing /data/ascb/607x.psd:
[testng] 02:29:13,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:29:13,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:13,015 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-15_02-29-13.log]
[testng] 02:29:13,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@193c8758 - End of configuration.
[testng] [2024-07-15 02:29:13,131] [pool-1-thread-2] Initializing /data/misc/venus_composite.psd:
[testng] 02:29:13,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:29:13,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:13,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-15_02-29-13.log]
[testng] 02:29:13,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc63795 - End of configuration.
[testng] [2024-07-15 02:29:15,729] [pool-1-thread-5] Initializing /data/ascb/thin&thick fill.2.psd:
[testng] [2024-07-15 02:29:16,070] [pool-1-thread-9] Initializing /data/ascb/423.psd:
[testng] [2024-07-15 02:29:16,124] [pool-1-thread-7] Initializing /data/jcb/Fig5A_sicont6h.tif:
[testng] [2024-07-15 02:29:16,283] [pool-1-thread-4] Initializing /data/misc/glossy_orbs.psd:
[testng] [2024-07-15 02:29:16,307] [pool-1-thread-6] Initializing /data/simon/colour_separated_image.psd:
[testng] [2024-07-15 02:29:16,408] [pool-1-thread-2] Initializing /data/misc/venus_composite_8bit.psd:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 954, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 31 seconds
Finished: SUCCESS