Started by upstream project "BIOFORMATS-test-repo" build number 123
originally caused by:
Started by upstream project "Trigger" build number 140
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins13365824094389201728.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19164_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:20:38,765 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:20:38,767 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:20:38,767 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:38,768 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:38,768 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:20:38,768 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:20:38,769 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:20:38,769 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:38,769 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:38,770 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:20:38,770 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:20:38,770 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:20:38,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:20:38,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:20:38,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:20:38,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:20:38,961 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:20:38,961 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:20:38,961 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:20:38,961 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:20:38,961 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:20:38,962 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:20:38,962 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 193 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-17 01:20:38,971] [main] java.version = 17.0.2
[testng] 01:20:38,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:20:38,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:39,013 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-17_01-20-38.log]
[testng] 01:20:39,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-07-17 01:20:39,017] [main] testng.directory = /data
[testng] [2024-07-17 01:20:39,017] [main] testng.configDirectory = /config
[testng] [2024-07-17 01:20:39,025] [main] testng.multiplier = 1.0
[testng] [2024-07-17 01:20:39,026] [main] testng.in-memory = false
[testng] [2024-07-17 01:20:39,026] [main] testng.allow-missing = false
[testng] [2024-07-17 01:20:39,026] [main] user.language = en
[testng] [2024-07-17 01:20:39,026] [main] user.country = ${user.country}
[testng] [2024-07-17 01:20:39,026] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-17 01:20:39,984] [main] ----------------------------------------
[testng] [2024-07-17 01:20:39,984] [main] Total files: 103
[testng] [2024-07-17 01:20:39,984] [main] Scan time: 0.957 s (9 ms/file)
[testng] [2024-07-17 01:20:39,984] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-17 01:20:46,521] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3:
[testng] 01:20:46,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:20:46,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,522 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-17_01-20-46.log]
[testng] 01:20:46,523 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f2cf2d8 - End of configuration.
[testng] [2024-07-17 01:20:46,547] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] 01:20:46,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:20:46,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-17_01-20-46.log]
[testng] 01:20:46,549 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66242606 - End of configuration.
[testng] [2024-07-17 01:20:46,564] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] 01:20:46,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:20:46,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-17_01-20-46.log]
[testng] 01:20:46,566 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d8ebf8 - End of configuration.
[testng] [2024-07-17 01:20:46,604] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] 01:20:46,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:20:46,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-17_01-20-46.log]
[testng] 01:20:46,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a50520 - End of configuration.
[testng] [2024-07-17 01:20:46,616] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] 01:20:46,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:20:46,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,617 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-17_01-20-46.log]
[testng] 01:20:46,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5616806e - End of configuration.
[testng] [2024-07-17 01:20:46,631] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] 01:20:46,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:20:46,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-17_01-20-46.log]
[testng] 01:20:46,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ac00cfe - End of configuration.
[testng] [2024-07-17 01:20:46,654] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] 01:20:46,654 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:20:46,654 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,655 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-17_01-20-46.log]
[testng] 01:20:46,655 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cef98d - End of configuration.
[testng] [2024-07-17 01:20:46,702] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] 01:20:46,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:20:46,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-17_01-20-46.log]
[testng] 01:20:46,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31b89335 - End of configuration.
[testng] [2024-07-17 01:20:46,764] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] 01:20:46,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:20:46,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,765 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-17_01-20-46.log]
[testng] 01:20:46,766 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3aac926a - End of configuration.
[testng] [2024-07-17 01:20:46,948] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] 01:20:46,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:20:46,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-17_01-20-46.log]
[testng] 01:20:46,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7961fa1c - End of configuration.
[testng] [2024-07-17 01:20:46,980] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] 01:20:46,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:20:46,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:46,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-17_01-20-46.log]
[testng] 01:20:46,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@171558f6 - End of configuration.
[testng] [2024-07-17 01:20:47,064] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] 01:20:47,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:20:47,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:47,065 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-17_01-20-47.log]
[testng] 01:20:47,065 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5897f1e8 - End of configuration.
[testng] [2024-07-17 01:20:48,305] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-07-17 01:20:48,320] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-07-17 01:20:48,376] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-07-17 01:20:48,389] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3:
[testng] [2024-07-17 01:20:48,711] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-07-17 01:20:48,769] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-07-17 01:20:49,174] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-07-17 01:20:49,234] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-07-17 01:20:49,403] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-07-17 01:20:49,447] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-07-17 01:20:49,734] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-07-17 01:20:49,879] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-07-17 01:20:50,087] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-07-17 01:20:50,178] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-07-17 01:20:50,353] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-07-17 01:20:50,602] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-07-17 01:20:50,984] [pool-1-thread-9] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-07-17 01:20:51,209] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-07-17 01:20:51,482] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-07-17 01:20:51,547] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-07-17 01:20:51,738] [pool-1-thread-4] Initializing /data/jay/dnasample.tif:
[testng] [2024-07-17 01:20:52,058] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-07-17 01:20:52,467] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-07-17 01:20:53,351] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-07-17 01:20:53,485] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-07-17 01:20:54,049] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-07-17 01:20:54,506] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-07-17 01:20:54,803] [pool-1-thread-12] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-07-17 01:20:55,707] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-07-17 01:20:56,022] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-07-17 01:20:56,035] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-07-17 01:20:56,185] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-07-17 01:20:56,468] [pool-1-thread-8] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-07-17 01:20:56,495] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-07-17 01:20:56,543] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-07-17 01:20:56,668] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-07-17 01:20:57,541] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-07-17 01:20:58,716] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-07-17 01:20:58,811] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-07-17 01:20:59,481] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-07-17 01:20:59,795] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-07-17 01:21:01,465] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-07-17 01:21:02,414] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-07-17 01:21:02,439] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-07-17 01:21:03,550] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-07-17 01:21:03,855] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-07-17 01:21:04,294] [pool-1-thread-9] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-07-17 01:21:04,430] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-07-17 01:21:04,592] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-07-17 01:21:05,964] [pool-1-thread-12] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-07-17 01:21:06,462] [pool-1-thread-2] Initializing /data/qa-7642/8.dm4:
[testng] [2024-07-17 01:21:07,501] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-07-17 01:21:08,659] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-07-17 01:21:09,028] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-07-17 01:21:09,081] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-07-17 01:21:09,695] [pool-1-thread-4] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-07-17 01:21:09,773] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-07-17 01:21:10,116] [pool-1-thread-4] Initializing /data/qa-21761/example.dm4:
[testng] [2024-07-17 01:21:10,846] [pool-1-thread-3] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-07-17 01:21:11,066] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-07-17 01:21:11,175] [pool-1-thread-4] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-07-17 01:21:11,318] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-07-17 01:21:11,941] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-07-17 01:21:12,200] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-07-17 01:21:12,272] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-07-17 01:21:12,982] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-07-17 01:21:13,277] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-07-17 01:21:13,670] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-07-17 01:21:14,298] [pool-1-thread-6] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-07-17 01:21:15,001] [pool-1-thread-8] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-07-17 01:21:15,157] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-07-17 01:21:15,530] [pool-1-thread-9] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-07-17 01:21:15,914] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-07-17 01:21:16,157] [pool-1-thread-4] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-07-17 01:21:16,166] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-07-17 01:21:16,575] [pool-1-thread-5] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-07-17 01:21:16,760] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3:
[testng] [2024-07-17 01:21:17,291] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-07-17 01:21:17,390] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-07-17 01:21:18,323] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-07-17 01:21:18,452] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-07-17 01:21:18,873] [pool-1-thread-11] Initializing /data/jay/Carbon.34.dm3:
[testng] [2024-07-17 01:21:19,080] [pool-1-thread-1] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-07-17 01:21:19,186] [pool-1-thread-10] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-07-17 01:21:19,213] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-07-17 01:21:19,463] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 1 second
Finished: SUCCESS