Started by upstream project "<a href='/jenkins/job/BIOFORMATS-test-repo/' class='jenkins-table__link model-link model-link--float'>BIOFORMATS-test-repo</a>" build number <a href='/jenkins/job/BIOFORMATS-test-repo/123' class='jenkins-table__link model-link model-link--float'>123</a>
originally caused by:
 Started by upstream project "<a href='/jenkins/job/Trigger/' class='jenkins-table__link model-link model-link--float'>Trigger</a>" build number <a href='/jenkins/job/Trigger/140' class='jenkins-table__link model-link model-link--float'>140</a>
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on <a href='/jenkins/computer/docker' class='jenkins-table__link model-link model-link--float'>docker</a> (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins17945476054806892794.sh
+ '[' metaxpress = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19201_merge_ci -v /uod/idr/repos/curated/metaxpress:/data -v /uod/idr-scratch/merge-ci/curated/metaxpress:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:26:51,327 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:26:51,328 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:26:51,328 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:26:51,329 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:26:51,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:26:51,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:26:51,330 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:26:51,330 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:26:51,331 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:26:51,331 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:26:51,332 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:26:51,332 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:26:51,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:26:51,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:26:51,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:26:51,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:26:51,548 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:26:51,548 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:26:51,549 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:26:51,549 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:26:51,549 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:26:51,550 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:26:51,550 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 219 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-07-17 01:26:51,558] [main] java.version = 17.0.2
   [testng] 01:26:51,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:26:51,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:51,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-17_01-26-51.log]
   [testng] 01:26:51,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-07-17 01:26:51,610] [main] testng.directory = /data
   [testng] [2024-07-17 01:26:51,610] [main] testng.configDirectory = /config
   [testng] [2024-07-17 01:26:51,619] [main] testng.multiplier = 1.0
   [testng] [2024-07-17 01:26:51,620] [main] testng.in-memory = false
   [testng] [2024-07-17 01:26:51,620] [main] testng.allow-missing = false
   [testng] [2024-07-17 01:26:51,620] [main] user.language = en
   [testng] [2024-07-17 01:26:51,620] [main] user.country = ${user.country}
   [testng] [2024-07-17 01:26:51,620] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-07-17 01:34:36,216] [main] ----------------------------------------
   [testng] [2024-07-17 01:34:36,216] [main] Total files: 1231
   [testng] [2024-07-17 01:34:36,216] [main] Scan time: 464.596 s (377 ms/file)
   [testng] [2024-07-17 01:34:36,217] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 10 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-07-17 01:39:03,282] [pool-1-thread-1] Initializing /data/samples/multi-z/2011-04-19-plate-1.HTD: 
   [testng] 01:39:03,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:39:03,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:03,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-17_01-39-03.log]
   [testng] 01:39:03,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b1e6405 - End of configuration.
   [testng] [2024-07-17 01:39:04,611] [pool-1-thread-10] Initializing /data/samples/single-site-test/single-site.HTD: 
   [testng] 01:39:04,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:39:04,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:04,613 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-17_01-39-04.log]
   [testng] 01:39:04,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6921b805 - End of configuration.
   [testng] [2024-07-17 01:39:04,943] [pool-1-thread-9] Initializing /data/public/idr0006/plate 11001_Plate_136/TimePoint_1/plate 11001.HTD: 
   [testng] 01:39:04,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:39:04,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:04,944 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-17_01-39-04.log]
   [testng] 01:39:04,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5506f702 - End of configuration.
   [testng] [2024-07-17 01:39:23,950] [pool-1-thread-8] Initializing /data/qa-4207/NSC.HTD: 
   [testng] 01:39:23,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:39:23,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:23,951 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-17_01-39-23.log]
   [testng] 01:39:23,952 |-INFO in ch.qos.logback.core.sift.SiftProcessor@354153a1 - End of configuration.
   [testng] [2024-07-17 01:39:24,756] [pool-1-thread-7] Initializing /data/samples/multi-channel-test/multi-channel.HTD: 
   [testng] 01:39:24,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:39:24,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:24,756 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-17_01-39-24.log]
   [testng] 01:39:24,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6818061b - End of configuration.
   [testng] [2024-07-17 01:39:24,829] [pool-1-thread-6] Initializing /data/samples/multi-channel-missing-corner/multi-channel.HTD: 
   [testng] 01:39:24,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:39:24,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:24,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-17_01-39-24.log]
   [testng] 01:39:24,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@490f771e - End of configuration.
   [testng] [2024-07-17 01:39:25,444] [pool-1-thread-5] Initializing /data/public/idr0081/BSF018292-1A/BSF018292-1A.HTD: 
   [testng] 01:39:25,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:39:25,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:25,445 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-17_01-39-25.log]
   [testng] 01:39:25,446 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4611718e - End of configuration.
   [testng] [2024-07-17 01:39:27,319] [pool-1-thread-4] Initializing /data/public/idr0005/Primary_001/2011-04-19-plate-1.HTD: 
   [testng] 01:39:27,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:39:27,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:27,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-17_01-39-27.log]
   [testng] 01:39:27,321 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ada1888 - End of configuration.
   [testng] [2024-07-17 01:39:28,540] [pool-1-thread-3] Initializing /data/public/idr0008/Plate10_Actinome1/Act1_Plate10-SP-A8.HTD: 
   [testng] 01:39:28,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:39:28,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:28,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-17_01-39-28.log]
   [testng] 01:39:28,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ff75168 - End of configuration.
   [testng] [2024-07-17 01:39:37,713] [pool-1-thread-2] Initializing /data/samples/thumb-test/2011-04-19-plate-1.HTD: 
   [testng] 01:39:37,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:39:37,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:37,715 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-17_01-39-37.log]
   [testng] 01:39:37,715 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ed566aa - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 530, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 32 minutes 3 seconds
Finished: SUCCESS