Started by upstream project "BIOFORMATS-test-repo" build number 123
originally caused by:
 Started by upstream project "Trigger" build number 140
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins17496124518753639239.sh
+ '[' leo = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19279_merge_ci -v /uod/idr/repos/curated/leo:/data -v /uod/idr-scratch/merge-ci/curated/leo:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 02:12:49,706 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:12:49,707 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 02:12:49,707 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:12:49,708 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:12:49,708 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:12:49,709 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:12:49,709 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:12:49,709 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:12:49,709 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:12:49,710 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:12:49,710 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:12:49,711 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:12:49,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:12:49,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:12:49,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:12:49,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:12:49,908 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:12:49,908 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:12:49,908 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:12:49,909 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:12:49,909 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 02:12:49,911 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 02:12:49,912 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-07-17 02:12:49,931] [main] java.version = 17.0.2
   [testng] 02:12:49,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:12:49,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:49,978 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-17_02-12-49.log]
   [testng] 02:12:49,980 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-07-17 02:12:49,982] [main] testng.directory = /data
   [testng] [2024-07-17 02:12:49,982] [main] testng.configDirectory = /config
   [testng] [2024-07-17 02:12:49,991] [main] testng.multiplier = 1.0
   [testng] [2024-07-17 02:12:49,992] [main] testng.in-memory = false
   [testng] [2024-07-17 02:12:49,992] [main] testng.allow-missing = false
   [testng] [2024-07-17 02:12:49,992] [main] user.language = en
   [testng] [2024-07-17 02:12:49,992] [main] user.country = ${user.country}
   [testng] [2024-07-17 02:12:49,992] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-07-17 02:12:50,559] [main] ----------------------------------------
   [testng] [2024-07-17 02:12:50,559] [main] Total files: 10
   [testng] [2024-07-17 02:12:50,559] [main] Scan time: 0.567 s (56 ms/file)
   [testng] [2024-07-17 02:12:50,559] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 9 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-07-17 02:12:51,475] [pool-1-thread-1] Initializing /data/steve/Ewald B/MHUSV02.SXM: 
   [testng] 02:12:51,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:12:51,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,476 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-17_02-12-51.log]
   [testng] 02:12:51,476 |-INFO in ch.qos.logback.core.sift.SiftProcessor@339bedee - End of configuration.
   [testng] [2024-07-17 02:12:51,509] [pool-1-thread-9] Initializing /data/misc/issue_image.tif: 
   [testng] 02:12:51,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:12:51,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,511 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-17_02-12-51.log]
   [testng] 02:12:51,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c64119c - End of configuration.
   [testng] [2024-07-17 02:12:51,532] [pool-1-thread-8] Initializing /data/steve/Ewald B/LEO435_SEM.TIF: 
   [testng] 02:12:51,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:12:51,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,534 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-17_02-12-51.log]
   [testng] 02:12:51,534 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c9c09f6 - End of configuration.
   [testng] [2024-07-17 02:12:51,566] [pool-1-thread-7] Initializing /data/qa-16912/Zeiss_supra_SEM.tif: 
   [testng] 02:12:51,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:12:51,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-17_02-12-51.log]
   [testng] 02:12:51,567 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12ff2bdf - End of configuration.
   [testng] [2024-07-17 02:12:51,596] [pool-1-thread-6] Initializing /data/public/dmankus/2160grating 3072.tif: 
   [testng] 02:12:51,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:12:51,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-17_02-12-51.log]
   [testng] 02:12:51,600 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cc554bb - End of configuration.
   [testng] [2024-07-17 02:12:51,643] [pool-1-thread-5] Initializing /data/public/dmankus/2160grating 1024.tif: 
   [testng] 02:12:51,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:12:51,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,644 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-17_02-12-51.log]
   [testng] 02:12:51,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@363263f1 - End of configuration.
   [testng] [2024-07-17 02:12:51,677] [pool-1-thread-4] Initializing /data/public/dmankus/2160grating 512.tif: 
   [testng] 02:12:51,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:12:51,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,679 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-17_02-12-51.log]
   [testng] 02:12:51,679 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7772c0c7 - End of configuration.
   [testng] [2024-07-17 02:12:51,707] [pool-1-thread-3] Initializing /data/qa-27408/Glc-1P+Cellob+CDP_72 h -04.tif: 
   [testng] 02:12:51,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:12:51,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,708 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-17_02-12-51.log]
   [testng] 02:12:51,708 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a6957cd - End of configuration.
   [testng] [2024-07-17 02:12:51,735] [pool-1-thread-2] Initializing /data/pablo/sample.tif: 
   [testng] 02:12:51,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:12:51,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:12:51,736 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-17_02-12-51.log]
   [testng] 02:12:51,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@182cb748 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 477, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 9 seconds
Finished: SUCCESS