Started by upstream project "BIOFORMATS-test-repo" build number 124
originally caused by:
Started by upstream project "Trigger" build number 141
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins18394180084986897565.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19367_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:27:53,648 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:27:53,650 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
[testng] 01:27:53,650 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:27:53,651 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:27:53,651 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:27:53,652 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:27:53,652 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:27:53,652 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:27:53,653 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:27:53,654 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:27:53,654 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:27:53,655 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:27:53,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:27:53,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:27:53,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:27:53,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:27:53,863 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:27:53,863 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:27:53,863 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:27:53,864 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:27:53,864 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
[testng] 01:27:53,865 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
[testng] 01:27:53,865 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 212 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-18 01:27:53,874] [main] java.version = 21
[testng] 01:27:53,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:27:53,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:27:53,919 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-18_01-27-53.log]
[testng] 01:27:53,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
[testng] [2024-07-18 01:27:53,923] [main] testng.directory = /data
[testng] [2024-07-18 01:27:53,923] [main] testng.configDirectory = /config
[testng] [2024-07-18 01:27:53,932] [main] testng.multiplier = 1.0
[testng] [2024-07-18 01:27:53,932] [main] testng.in-memory = false
[testng] [2024-07-18 01:27:53,933] [main] testng.allow-missing = false
[testng] [2024-07-18 01:27:53,933] [main] user.language = en
[testng] [2024-07-18 01:27:53,933] [main] user.country = ${user.country}
[testng] [2024-07-18 01:27:53,933] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-18 01:27:56,113] [main] ----------------------------------------
[testng] [2024-07-18 01:27:56,113] [main] Total files: 259
[testng] [2024-07-18 01:27:56,113] [main] Scan time: 2.18 s (8 ms/file)
[testng] [2024-07-18 01:27:56,114] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-18 01:34:13,683] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib:
[testng] 01:34:13,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:34:13,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:13,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-18_01-34-13.log]
[testng] 01:34:13,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2df6e632 - End of configuration.
[testng] [2024-07-18 01:34:13,899] [pool-1-thread-12] Initializing /data/brian/PA-GFP-3.oib:
[testng] 01:34:13,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:34:13,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:13,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-18_01-34-13.log]
[testng] 01:34:13,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b46a36f - End of configuration.
[testng] [2024-07-18 01:34:14,155] [pool-1-thread-11] Initializing /data/johannes/step2.bmp:
[testng] 01:34:14,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:34:14,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:14,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-18_01-34-14.log]
[testng] 01:34:14,156 |-INFO in ch.qos.logback.core.sift.SiftProcessor@626501d4 - End of configuration.
[testng] [2024-07-18 01:34:14,164] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] 01:34:14,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:34:14,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:14,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-18_01-34-14.log]
[testng] 01:34:14,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ed2469 - End of configuration.
[testng] [2024-07-18 01:34:14,232] [pool-1-thread-9] Initializing /data/johannes/step4.bmp:
[testng] 01:34:14,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:34:14,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:14,233 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-18_01-34-14.log]
[testng] 01:34:14,233 |-INFO in ch.qos.logback.core.sift.SiftProcessor@500fb382 - End of configuration.
[testng] [2024-07-18 01:34:14,240] [pool-1-thread-8] Initializing /data/brian/LILY POLLEN.oib:
[testng] 01:34:14,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:34:14,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:14,241 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-18_01-34-14.log]
[testng] 01:34:14,242 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cc54f0d - End of configuration.
[testng] [2024-07-18 01:34:14,577] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] 01:34:14,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:34:14,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:14,578 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-18_01-34-14.log]
[testng] 01:34:14,578 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2408ca60 - End of configuration.
[testng] [2024-07-18 01:34:15,184] [pool-1-thread-6] Initializing /data/molly/11OCT4.OIF:
[testng] 01:34:15,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:34:15,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:15,186 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-18_01-34-15.log]
[testng] 01:34:15,186 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7afdaede - End of configuration.
[testng] [2024-07-18 01:34:15,468] [pool-1-thread-5] Initializing /data/david/Image0016.oib:
[testng] 01:34:15,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:34:15,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:15,469 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-18_01-34-15.log]
[testng] 01:34:15,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@353a6f3e - End of configuration.
[testng] [2024-07-18 01:34:15,523] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] 01:34:15,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:34:15,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:15,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-18_01-34-15.log]
[testng] 01:34:15,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@361198c8 - End of configuration.
[testng] [2024-07-18 01:34:15,560] [pool-1-thread-3] Initializing /data/satoshi/60x_5x_1.oif:
[testng] 01:34:15,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:34:15,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:15,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-18_01-34-15.log]
[testng] 01:34:15,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c4f9d35 - End of configuration.
[testng] [2024-07-18 01:34:15,619] [pool-1-thread-2] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] 01:34:15,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:34:15,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:34:15,619 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-18_01-34-15.log]
[testng] 01:34:15,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@649b1e1b - End of configuration.
[testng] [2024-07-18 01:34:21,149] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2024-07-18 01:34:21,968] [pool-1-thread-10] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2024-07-18 01:34:22,100] [pool-1-thread-5] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2024-07-18 01:34:22,106] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oib:
[testng] [2024-07-18 01:34:22,206] [pool-1-thread-4] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2024-07-18 01:34:22,503] [pool-1-thread-1] Initializing /data/glen/singleseqframe.oif:
[testng] [2024-07-18 01:34:22,680] [pool-1-thread-12] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2024-07-18 01:34:22,775] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2024-07-18 01:34:23,257] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif:
[testng] [2024-07-18 01:34:23,455] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2024-07-18 01:34:24,705] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2024-07-18 01:34:24,923] [pool-1-thread-7] Initializing /data/glen/seqlinestack.oif:
[testng] [2024-07-18 01:34:25,075] [pool-1-thread-12] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2024-07-18 01:34:25,226] [pool-1-thread-10] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2024-07-18 01:34:25,510] [pool-1-thread-3] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2024-07-18 01:34:25,773] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2024-07-18 01:34:25,880] [pool-1-thread-4] Initializing /data/yasunori/series_1.oib:
[testng] [2024-07-18 01:34:26,134] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif:
[testng] [2024-07-18 01:34:26,173] [pool-1-thread-8] Initializing /data/molly/11OCT7.OIF:
[testng] [2024-07-18 01:34:26,440] [pool-1-thread-1] Initializing /data/glen/singleseqline.oib:
[testng] [2024-07-18 01:34:26,876] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] [2024-07-18 01:34:26,955] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2024-07-18 01:34:27,474] [pool-1-thread-1] Initializing /data/allan/62909#1.oib:
[testng] [2024-07-18 01:34:27,700] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2024-07-18 01:34:28,634] [pool-1-thread-4] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2024-07-18 01:34:29,394] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib:
[testng] [2024-07-18 01:34:29,609] [pool-1-thread-3] Initializing /data/sten/01.oib:
[testng] [2024-07-18 01:34:29,739] [pool-1-thread-5] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2024-07-18 01:34:29,917] [pool-1-thread-11] Initializing /data/glen/4205basal106072.oif:
[testng] [2024-07-18 01:34:30,077] [pool-1-thread-12] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2024-07-18 01:34:30,979] [pool-1-thread-9] Initializing /data/david/Image0016.oif:
[testng] [2024-07-18 01:34:31,037] [pool-1-thread-3] Initializing /data/karl/Image0009.oib:
[testng] [2024-07-18 01:34:31,501] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] [2024-07-18 01:34:31,857] [pool-1-thread-1] Initializing /data/aryeh/030408 2 1.oib:
[testng] [2024-07-18 01:34:32,051] [pool-1-thread-10] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] [2024-07-18 01:34:32,838] [pool-1-thread-10] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2024-07-18 01:34:33,031] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] [2024-07-18 01:34:33,909] [pool-1-thread-9] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2024-07-18 01:34:34,688] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib:
[testng] [2024-07-18 01:34:35,645] [pool-1-thread-1] Initializing /data/marc/V0606J.oib:
[testng] [2024-07-18 01:34:39,246] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib:
[testng] [2024-07-18 01:34:40,018] [pool-1-thread-6] Initializing /data/christian/20min.oif:
[testng] [2024-07-18 01:34:40,051] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] [2024-07-18 01:34:40,910] [pool-1-thread-6] Initializing /data/brian/FLIP.oib:
[testng] [2024-07-18 01:34:41,479] [pool-1-thread-3] Initializing /data/stefan/yc2_live-03.oib:
[testng] [2024-07-18 01:34:43,587] [pool-1-thread-6] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2024-07-18 01:34:44,542] [pool-1-thread-2] Initializing /data/johannes/step5b.bmp:
[testng] [2024-07-18 01:34:44,927] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] [2024-07-18 01:34:45,549] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2024-07-18 01:34:45,783] [pool-1-thread-3] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2024-07-18 01:34:46,308] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2024-07-18 01:34:46,842] [pool-1-thread-2] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2024-07-18 01:34:47,304] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2024-07-18 01:34:48,217] [pool-1-thread-1] Initializing /data/marc/V0606L.oib:
[testng] [2024-07-18 01:34:49,971] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2024-07-18 01:34:50,185] [pool-1-thread-2] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2024-07-18 01:34:50,844] [pool-1-thread-9] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2024-07-18 01:34:50,900] [pool-1-thread-6] Initializing /data/johannes/step4b.bmp:
[testng] [2024-07-18 01:34:51,293] [pool-1-thread-2] Initializing /data/michael/CELL3.oib:
[testng] [2024-07-18 01:34:51,835] [pool-1-thread-2] Initializing /data/monica/Image0056.oif:
[testng] [2024-07-18 01:34:51,870] [pool-1-thread-6] Initializing /data/tom/RGB-1.avi:
[testng] [2024-07-18 01:34:52,065] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2024-07-18 01:34:53,234] [pool-1-thread-9] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] [2024-07-18 01:34:53,658] [pool-1-thread-6] Initializing /data/simon/used_to_work.oib:
[testng] [2024-07-18 01:34:54,156] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2024-07-18 01:34:54,381] [pool-1-thread-2] Initializing /data/pedro/plv-test.oib:
[testng] [2024-07-18 01:34:54,637] [pool-1-thread-9] Initializing /data/glen/Image0002.oif:
[testng] [2024-07-18 01:34:55,148] [pool-1-thread-5] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2024-07-18 01:34:55,325] [pool-1-thread-8] Initializing /data/molly/11OCT10.OIF:
[testng] [2024-07-18 01:34:56,082] [pool-1-thread-2] Initializing /data/glen/simulstack.oif:
[testng] [2024-07-18 01:34:56,199] [pool-1-thread-6] Initializing /data/molly/11OCT2.OIF:
[testng] [2024-07-18 01:34:57,735] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2024-07-18 01:34:58,715] [pool-1-thread-5] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2024-07-18 01:35:00,020] [pool-1-thread-5] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2024-07-18 01:35:00,443] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2024-07-18 01:35:01,490] [pool-1-thread-1] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2024-07-18 01:35:02,242] [pool-1-thread-1] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2024-07-18 01:35:03,251] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2024-07-18 01:35:03,538] [pool-1-thread-7] Initializing /data/molly/11OCT8.OIF:
[testng] [2024-07-18 01:35:03,946] [pool-1-thread-5] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2024-07-18 01:35:04,421] [pool-1-thread-1] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2024-07-18 01:35:04,983] [pool-1-thread-1] Initializing /data/brian/Lambda10nm.oib:
[testng] [2024-07-18 01:35:05,160] [pool-1-thread-5] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2024-07-18 01:35:05,779] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib:
[testng] [2024-07-18 01:35:06,161] [pool-1-thread-5] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2024-07-18 01:35:06,512] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2024-07-18 01:35:06,826] [pool-1-thread-1] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2024-07-18 01:35:08,003] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF:
[testng] [2024-07-18 01:35:09,927] [pool-1-thread-5] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] [2024-07-18 01:35:11,438] [pool-1-thread-11] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2024-07-18 01:35:11,989] [pool-1-thread-1] Initializing /data/glen/notsaturated.oif:
[testng] [2024-07-18 01:35:12,109] [pool-1-thread-5] Initializing /data/glen/Null file/test no change.oif:
[testng] [2024-07-18 01:35:13,761] [pool-1-thread-5] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2024-07-18 01:35:15,003] [pool-1-thread-5] Initializing /data/molly/11OCT5.OIF:
[testng] [2024-07-18 01:35:17,590] [pool-1-thread-11] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2024-07-18 01:35:23,169] [pool-1-thread-2] Initializing /data/glen/simulstack.oib:
[testng] [2024-07-18 01:35:23,835] [pool-1-thread-3] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] [2024-07-18 01:35:24,399] [pool-1-thread-2] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2024-07-18 01:35:25,042] [pool-1-thread-9] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2024-07-18 01:35:25,902] [pool-1-thread-2] Initializing /data/johannes/step1.bmp:
[testng] [2024-07-18 01:35:26,047] [pool-1-thread-9] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2024-07-18 01:35:26,268] [pool-1-thread-10] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2024-07-18 01:35:26,983] [pool-1-thread-2] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2024-07-18 01:35:28,611] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2024-07-18 01:35:33,317] [pool-1-thread-10] Initializing /data/simon/never_worked.oib:
[testng] [2024-07-18 01:35:34,350] [pool-1-thread-10] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2024-07-18 01:35:35,428] [pool-1-thread-10] Initializing /data/qa-17748/Image0098.oib:
[testng] [2024-07-18 01:35:36,082] [pool-1-thread-10] Initializing /data/glen/singleseqline.oif:
[testng] [2024-07-18 01:35:37,589] [pool-1-thread-10] Initializing /data/aryeh/control_test.oib:
[testng] [2024-07-18 01:35:42,068] [pool-1-thread-9] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2024-07-18 01:35:42,362] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2024-07-18 01:35:42,442] [pool-1-thread-3] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] [2024-07-18 01:35:42,645] [pool-1-thread-8] Initializing /data/brian/lambda02nm.oib:
[testng] [2024-07-18 01:35:42,896] [pool-1-thread-2] Initializing /data/molly/11OCT11.OIF:
[testng] [2024-07-18 01:35:43,658] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2024-07-18 01:35:44,146] [pool-1-thread-8] Initializing /data/molly/11OCT6.OIF:
[testng] [2024-07-18 01:35:44,743] [pool-1-thread-3] Initializing /data/yoshihito/XY.oib:
[testng] [2024-07-18 01:35:45,098] [pool-1-thread-7] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2024-07-18 01:35:45,143] [pool-1-thread-9] Initializing /data/johannes/step3.bmp:
[testng] [2024-07-18 01:35:45,202] [pool-1-thread-3] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2024-07-18 01:35:46,166] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib:
[testng] [2024-07-18 01:35:46,216] [pool-1-thread-7] Initializing /data/jae/Image0001.oib:
[testng] [2024-07-18 01:35:46,769] [pool-1-thread-3] Initializing /data/molly/11OCT3.OIF:
[testng] [2024-07-18 01:35:48,111] [pool-1-thread-9] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2024-07-18 01:35:48,585] [pool-1-thread-5] Initializing /data/qa-17748/Image0079.oib:
[testng] [2024-07-18 01:35:49,272] [pool-1-thread-5] Initializing /data/glen/Null file/test change.oif:
[testng] [2024-07-18 01:35:49,729] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] [2024-07-18 01:35:51,196] [pool-1-thread-5] Initializing /data/aryeh/1h.oib:
[testng] [2024-07-18 01:35:52,314] [pool-1-thread-1] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2024-07-18 01:35:52,406] [pool-1-thread-6] Initializing /data/glen/seqlinestack.oib:
[testng] [2024-07-18 01:35:53,184] [pool-1-thread-7] Initializing /data/glen/111407.oif:
[testng] [2024-07-18 01:35:53,297] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 minutes 3 seconds
Finished: SUCCESS