Started by upstream project "BIOFORMATS-test-repo" build number 124
originally caused by:
Started by upstream project "Trigger" build number 141
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins12871148673257162920.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19414_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 02:03:04,935 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:03:04,936 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
[testng] 02:03:04,936 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:03:04,938 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:03:04,938 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:03:04,938 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:03:04,939 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:03:04,939 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:03:04,939 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:03:04,940 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:03:04,940 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:03:04,940 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:03:05,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:03:05,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:03:05,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:03:05,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:03:05,364 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:03:05,365 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:03:05,365 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:03:05,365 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:03:05,365 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
[testng] 02:03:05,366 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
[testng] 02:03:05,366 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 427 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-18 02:03:05,377] [main] java.version = 21
[testng] 02:03:05,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:03:05,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:05,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-18_02-03-05.log]
[testng] 02:03:05,484 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
[testng] [2024-07-18 02:03:05,515] [main] testng.directory = /data
[testng] [2024-07-18 02:03:05,516] [main] testng.configDirectory = /config
[testng] [2024-07-18 02:03:05,613] [main] testng.multiplier = 1.0
[testng] [2024-07-18 02:03:05,614] [main] testng.in-memory = false
[testng] [2024-07-18 02:03:05,614] [main] testng.allow-missing = false
[testng] [2024-07-18 02:03:05,614] [main] user.language = en
[testng] [2024-07-18 02:03:05,614] [main] user.country = ${user.country}
[testng] [2024-07-18 02:03:05,614] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-18 02:03:16,727] [main] ----------------------------------------
[testng] [2024-07-18 02:03:16,727] [main] Total files: 268
[testng] [2024-07-18 02:03:16,727] [main] Scan time: 11.112 s (41 ms/file)
[testng] [2024-07-18 02:03:16,727] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-18 02:03:26,453] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] 02:03:26,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:03:26,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,455 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-18_02-03-26.log]
[testng] 02:03:26,455 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6dbb2088 - End of configuration.
[testng] [2024-07-18 02:03:26,481] [pool-1-thread-12] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] 02:03:26,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:03:26,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,483 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-18_02-03-26.log]
[testng] 02:03:26,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17045d19 - End of configuration.
[testng] [2024-07-18 02:03:26,518] [pool-1-thread-11] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] 02:03:26,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:03:26,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,519 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-18_02-03-26.log]
[testng] 02:03:26,520 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dc69032 - End of configuration.
[testng] [2024-07-18 02:03:26,568] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] 02:03:26,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:03:26,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-18_02-03-26.log]
[testng] 02:03:26,570 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51cffc54 - End of configuration.
[testng] [2024-07-18 02:03:26,585] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] 02:03:26,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:03:26,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,586 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-18_02-03-26.log]
[testng] 02:03:26,586 |-INFO in ch.qos.logback.core.sift.SiftProcessor@120def1a - End of configuration.
[testng] [2024-07-18 02:03:26,597] [pool-1-thread-8] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] 02:03:26,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:03:26,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-18_02-03-26.log]
[testng] 02:03:26,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67aef899 - End of configuration.
[testng] [2024-07-18 02:03:26,650] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] 02:03:26,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:03:26,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-18_02-03-26.log]
[testng] 02:03:26,651 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30619282 - End of configuration.
[testng] [2024-07-18 02:03:26,692] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng] 02:03:26,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:03:26,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,693 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-18_02-03-26.log]
[testng] 02:03:26,693 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58d4e50b - End of configuration.
[testng] [2024-07-18 02:03:26,820] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] 02:03:26,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:03:26,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-18_02-03-26.log]
[testng] 02:03:26,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31029fc7 - End of configuration.
[testng] [2024-07-18 02:03:26,897] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] 02:03:26,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:03:26,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,898 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-18_02-03-26.log]
[testng] 02:03:26,899 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c1f9dc7 - End of configuration.
[testng] [2024-07-18 02:03:26,926] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] 02:03:26,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:03:26,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-18_02-03-26.log]
[testng] 02:03:26,928 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ae80e56 - End of configuration.
[testng] [2024-07-18 02:03:26,957] [pool-1-thread-2] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] 02:03:26,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:03:26,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:03:26,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-18_02-03-26.log]
[testng] 02:03:26,959 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79860d34 - End of configuration.
[testng] [2024-07-18 02:03:29,429] [pool-1-thread-7] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-07-18 02:03:29,457] [pool-1-thread-1] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-07-18 02:03:29,501] [pool-1-thread-4] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2024-07-18 02:03:29,533] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] [2024-07-18 02:03:29,545] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-07-18 02:03:29,590] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-07-18 02:03:29,616] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-07-18 02:03:29,638] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-07-18 02:03:29,656] [pool-1-thread-11] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] [2024-07-18 02:03:29,671] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-07-18 02:03:29,706] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-07-18 02:03:29,870] [pool-1-thread-5] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-07-18 02:03:30,130] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-07-18 02:03:30,301] [pool-1-thread-1] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] [2024-07-18 02:03:30,347] [pool-1-thread-6] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-07-18 02:03:30,402] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2024-07-18 02:03:30,441] [pool-1-thread-10] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2024-07-18 02:03:30,525] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-07-18 02:03:30,533] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2024-07-18 02:03:30,568] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] [2024-07-18 02:03:30,600] [pool-1-thread-3] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-07-18 02:03:30,676] [pool-1-thread-7] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-07-18 02:03:30,725] [pool-1-thread-11] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-07-18 02:03:30,789] [pool-1-thread-5] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-07-18 02:03:30,868] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2024-07-18 02:03:30,933] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2024-07-18 02:03:30,967] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-07-18 02:03:31,001] [pool-1-thread-8] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] [2024-07-18 02:03:31,059] [pool-1-thread-10] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2024-07-18 02:03:31,114] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-07-18 02:03:31,153] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] [2024-07-18 02:03:31,234] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2024-07-18 02:03:31,304] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2024-07-18 02:03:31,320] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2024-07-18 02:03:31,334] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-07-18 02:03:31,349] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-07-18 02:03:31,382] [pool-1-thread-1] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-07-18 02:03:31,409] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-07-18 02:03:31,530] [pool-1-thread-3] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-07-18 02:03:31,593] [pool-1-thread-6] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-07-18 02:03:31,687] [pool-1-thread-7] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-07-18 02:03:31,695] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-07-18 02:03:31,725] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2024-07-18 02:03:31,745] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-07-18 02:03:31,797] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-07-18 02:03:31,831] [pool-1-thread-12] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-07-18 02:03:31,888] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-07-18 02:03:31,907] [pool-1-thread-7] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-07-18 02:03:31,931] [pool-1-thread-1] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2024-07-18 02:03:31,979] [pool-1-thread-10] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-07-18 02:03:32,045] [pool-1-thread-9] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-07-18 02:03:32,168] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-07-18 02:03:32,186] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-07-18 02:03:32,299] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2024-07-18 02:03:32,377] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-07-18 02:03:32,419] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-07-18 02:03:32,478] [pool-1-thread-4] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-07-18 02:03:32,494] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-07-18 02:03:32,539] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] [2024-07-18 02:03:32,555] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-07-18 02:03:32,570] [pool-1-thread-5] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-07-18 02:03:32,617] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-07-18 02:03:32,708] [pool-1-thread-3] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2024-07-18 02:03:32,741] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-07-18 02:03:32,808] [pool-1-thread-6] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-07-18 02:03:32,860] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-07-18 02:03:32,890] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-07-18 02:03:32,980] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] [2024-07-18 02:03:33,021] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-07-18 02:03:33,032] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-07-18 02:03:33,093] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-07-18 02:03:33,124] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-07-18 02:03:33,218] [pool-1-thread-9] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-07-18 02:03:33,255] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] [2024-07-18 02:03:33,290] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-07-18 02:03:33,301] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2024-07-18 02:03:33,319] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-07-18 02:03:33,327] [pool-1-thread-12] Initializing /data/steve/FITS/M13.fits:
[testng] [2024-07-18 02:03:33,336] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-07-18 02:03:33,452] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-07-18 02:03:33,503] [pool-1-thread-11] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-07-18 02:03:33,552] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2024-07-18 02:03:33,580] [pool-1-thread-6] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-07-18 02:03:33,590] [pool-1-thread-5] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-07-18 02:03:33,622] [pool-1-thread-8] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2024-07-18 02:03:33,689] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-07-18 02:03:33,700] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-07-18 02:03:33,752] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2024-07-18 02:03:33,767] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-07-18 02:03:33,825] [pool-1-thread-2] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-07-18 02:03:33,857] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-07-18 02:03:33,877] [pool-1-thread-11] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-07-18 02:03:33,960] [pool-1-thread-9] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] [2024-07-18 02:03:34,021] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-07-18 02:03:34,038] [pool-1-thread-11] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-07-18 02:03:34,074] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-07-18 02:03:34,083] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-07-18 02:03:34,146] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-07-18 02:03:34,178] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-07-18 02:03:34,277] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] [2024-07-18 02:03:34,332] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-07-18 02:03:34,357] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] [2024-07-18 02:03:34,405] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2024-07-18 02:03:34,446] [pool-1-thread-7] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] [2024-07-18 02:03:34,572] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-07-18 02:03:34,634] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-07-18 02:03:34,649] [pool-1-thread-1] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] [2024-07-18 02:03:34,710] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2024-07-18 02:03:34,738] [pool-1-thread-12] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-07-18 02:03:34,758] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2024-07-18 02:03:34,776] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-07-18 02:03:34,798] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2024-07-18 02:03:34,849] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-07-18 02:03:34,962] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-07-18 02:03:35,023] [pool-1-thread-2] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] [2024-07-18 02:03:35,036] [pool-1-thread-3] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-07-18 02:03:35,122] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2024-07-18 02:03:35,193] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2024-07-18 02:03:35,234] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2024-07-18 02:03:35,273] [pool-1-thread-2] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-07-18 02:03:35,307] [pool-1-thread-9] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2024-07-18 02:03:35,334] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-07-18 02:03:35,380] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-07-18 02:03:35,409] [pool-1-thread-11] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-07-18 02:03:35,448] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2024-07-18 02:03:35,527] [pool-1-thread-12] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-07-18 02:03:35,532] [pool-1-thread-8] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2024-07-18 02:03:35,582] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-07-18 02:03:35,649] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] [2024-07-18 02:03:35,736] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-07-18 02:03:35,755] [pool-1-thread-7] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-07-18 02:03:35,782] [pool-1-thread-9] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-07-18 02:03:35,805] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-07-18 02:03:35,861] [pool-1-thread-11] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-07-18 02:03:35,943] [pool-1-thread-6] Initializing /data/steve/FITS/M51.fits:
[testng] [2024-07-18 02:03:35,971] [pool-1-thread-10] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-07-18 02:03:35,997] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-07-18 02:03:36,021] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] [2024-07-18 02:03:36,065] [pool-1-thread-2] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-07-18 02:03:36,151] [pool-1-thread-6] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2024-07-18 02:03:36,174] [pool-1-thread-3] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-07-18 02:03:36,226] [pool-1-thread-8] Initializing /data/steve/TIFF/HAFF SEM:
[testng] [2024-07-18 02:03:36,262] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-07-18 02:03:36,318] [pool-1-thread-9] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-07-18 02:03:36,341] [pool-1-thread-5] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-07-18 02:03:36,370] [pool-1-thread-7] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-07-18 02:03:36,414] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-07-18 02:03:36,453] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 41 seconds
Finished: SUCCESS