Started by upstream project "BIOFORMATS-test-repo" build number 125 originally caused by: Started by upstream project "Trigger" build number 142 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins11345154341971495021.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_19492_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:26,621 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:26,622 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:26,622 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:26,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:26,624 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:26,624 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:26,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:26,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:26,625 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:26,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:26,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:26,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:26,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:26,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:26,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:26,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:26,884 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:26,884 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:26,884 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:26,885 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:26,885 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:26,885 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:26,885 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 260 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-19 01:21:26,895] [main] java.version = 1.8.0_342 [testng] 01:21:26,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:26,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-19_01-21-26.log] [testng] 01:21:26,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-19 01:21:26,944] [main] testng.directory = /data [testng] [2024-07-19 01:21:26,944] [main] testng.configDirectory = /config [testng] [2024-07-19 01:21:26,955] [main] testng.multiplier = 1.0 [testng] [2024-07-19 01:21:26,956] [main] testng.in-memory = false [testng] [2024-07-19 01:21:26,956] [main] testng.allow-missing = false [testng] [2024-07-19 01:21:26,956] [main] user.language = en [testng] [2024-07-19 01:21:26,956] [main] user.country = ${user.country} [testng] [2024-07-19 01:21:26,956] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-19 01:21:27,882] [main] ---------------------------------------- [testng] [2024-07-19 01:21:27,882] [main] Total files: 103 [testng] [2024-07-19 01:21:27,882] [main] Scan time: 0.926 s (8 ms/file) [testng] [2024-07-19 01:21:27,882] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-19 01:21:35,978] [pool-1-thread-1] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] 01:21:35,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:35,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:35,980 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-19_01-21-35.log] [testng] 01:21:35,980 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35ba64a6 - End of configuration. [testng] [2024-07-19 01:21:36,008] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 01:21:36,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:36,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-19_01-21-36.log] [testng] 01:21:36,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f498a55 - End of configuration. [testng] [2024-07-19 01:21:36,054] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3: [testng] 01:21:36,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:36,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,055 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-19_01-21-36.log] [testng] 01:21:36,056 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b9d7e78 - End of configuration. [testng] [2024-07-19 01:21:36,074] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 01:21:36,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:36,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-19_01-21-36.log] [testng] 01:21:36,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c6d1947 - End of configuration. [testng] [2024-07-19 01:21:36,102] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 01:21:36,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:36,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,103 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-19_01-21-36.log] [testng] 01:21:36,126 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4924014c - End of configuration. [testng] [2024-07-19 01:21:36,197] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] 01:21:36,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:36,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-19_01-21-36.log] [testng] 01:21:36,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33456318 - End of configuration. [testng] [2024-07-19 01:21:36,213] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] 01:21:36,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:36,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-19_01-21-36.log] [testng] 01:21:36,215 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ad189d2 - End of configuration. [testng] [2024-07-19 01:21:36,357] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 01:21:36,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:36,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-19_01-21-36.log] [testng] 01:21:36,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ebd7f45 - End of configuration. [testng] [2024-07-19 01:21:36,374] [pool-1-thread-5] Initializing /data/jay/recAmaghi.dm3: [testng] 01:21:36,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:36,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-19_01-21-36.log] [testng] 01:21:36,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@539a1df8 - End of configuration. [testng] [2024-07-19 01:21:36,402] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:21:36,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:36,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-19_01-21-36.log] [testng] 01:21:36,404 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fb278b6 - End of configuration. [testng] [2024-07-19 01:21:36,432] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.tif: [testng] 01:21:36,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:36,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,434 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-19_01-21-36.log] [testng] 01:21:36,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@377882be - End of configuration. [testng] [2024-07-19 01:21:36,483] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] 01:21:36,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:36,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:36,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-19_01-21-36.log] [testng] 01:21:36,485 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c29db4a - End of configuration. [testng] [2024-07-19 01:21:39,707] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-07-19 01:21:39,769] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-07-19 01:21:40,604] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-07-19 01:21:40,966] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-07-19 01:21:41,258] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-07-19 01:21:41,642] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-07-19 01:21:42,166] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-07-19 01:21:42,266] [pool-1-thread-4] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-07-19 01:21:42,340] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-07-19 01:21:42,653] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-07-19 01:21:42,700] [pool-1-thread-6] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-07-19 01:21:43,049] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-07-19 01:21:43,116] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-07-19 01:21:45,083] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-07-19 01:21:45,469] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-07-19 01:21:45,993] [pool-1-thread-10] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-07-19 01:21:46,387] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-07-19 01:21:46,947] [pool-1-thread-5] Initializing /data/qa-7642/8.dm4: [testng] [2024-07-19 01:21:48,730] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-07-19 01:21:48,839] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-07-19 01:21:48,860] [pool-1-thread-4] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-07-19 01:21:48,971] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-07-19 01:21:49,548] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-07-19 01:21:49,634] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-07-19 01:21:52,856] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-07-19 01:21:53,284] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-07-19 01:21:53,324] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-07-19 01:21:53,457] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-07-19 01:21:54,405] [pool-1-thread-7] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-07-19 01:21:55,211] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-07-19 01:21:55,619] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-07-19 01:21:56,586] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-07-19 01:21:57,596] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-07-19 01:21:58,191] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-07-19 01:21:58,370] [pool-1-thread-6] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-07-19 01:21:59,432] [pool-1-thread-4] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-07-19 01:21:59,858] [pool-1-thread-10] Initializing /data/samples/test-tiles.dm3: [testng] [2024-07-19 01:22:00,119] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-07-19 01:22:01,025] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-07-19 01:22:03,732] [pool-1-thread-11] Initializing /data/jay/dnasample1.dm3: [testng] [2024-07-19 01:22:04,620] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-07-19 01:22:05,383] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-07-19 01:22:06,261] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-07-19 01:22:07,107] [pool-1-thread-2] Initializing /data/jay/dnasample.tif: [testng] [2024-07-19 01:22:08,499] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-07-19 01:22:09,692] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-07-19 01:22:10,276] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-07-19 01:22:10,304] [pool-1-thread-11] Initializing /data/qa-21761/example.dm4: [testng] [2024-07-19 01:22:10,463] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-07-19 01:22:11,076] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-07-19 01:22:12,034] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-07-19 01:22:12,061] [pool-1-thread-11] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-07-19 01:22:13,695] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-07-19 01:22:14,770] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-07-19 01:22:15,082] [pool-1-thread-12] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-07-19 01:22:15,328] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-07-19 01:22:15,538] [pool-1-thread-6] Initializing /data/jay/DMtest.dm3: [testng] [2024-07-19 01:22:16,142] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] [2024-07-19 01:22:16,300] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-07-19 01:22:16,321] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-07-19 01:22:16,437] [pool-1-thread-9] Initializing /data/jay/camtest1.dm3: [testng] [2024-07-19 01:22:16,674] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-07-19 01:22:16,790] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-07-19 01:22:17,123] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-07-19 01:22:17,290] [pool-1-thread-11] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-07-19 01:22:17,744] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-07-19 01:22:18,285] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-07-19 01:22:18,330] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-07-19 01:22:18,646] [pool-1-thread-3] Initializing /data/ofra/lowloss.dm3: [testng] [2024-07-19 01:22:19,489] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-07-19 01:22:19,691] [pool-1-thread-2] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-07-19 01:22:20,225] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-07-19 01:22:20,289] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-07-19 01:22:20,579] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-07-19 01:22:20,817] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-07-19 01:22:20,837] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-07-19 01:22:21,144] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-07-19 01:22:21,565] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-07-19 01:22:21,804] [pool-1-thread-9] Initializing /data/melissa/annotation-test.tif: [testng] [2024-07-19 01:22:21,911] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-07-19 01:22:22,236] [pool-1-thread-9] Initializing /data/jay/smallerfile.dm3: [testng] [2024-07-19 01:22:22,279] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-07-19 01:22:22,597] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-07-19 01:22:22,660] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-07-19 01:22:22,740] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-07-19 01:22:22,933] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 20 seconds Finished: SUCCESS