Started by upstream project "BIOFORMATS-test-repo" build number 125
originally caused by:
 Started by upstream project "Trigger" build number 142
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins4447757301111024409.sh
+ '[' bmp = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19514_merge_ci -v /uod/idr/repos/curated/bmp:/data -v /uod/idr-scratch/merge-ci/curated/bmp:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 01:24:38,094 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:24:38,096 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 01:24:38,096 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:24:38,097 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:24:38,098 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:24:38,098 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:24:38,098 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:24:38,098 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:24:38,099 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:24:38,099 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:24:38,099 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:24:38,099 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:24:38,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:24:38,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:24:38,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:24:38,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:24:38,443 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:24:38,443 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:24:38,443 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:24:38,444 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:24:38,444 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 01:24:38,445 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 01:24:38,445 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 346 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-07-19 01:24:38,457] [main] java.version = 1.8.0_342
   [testng] 01:24:38,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:24:38,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:38,512 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-19_01-24-38.log]
   [testng] 01:24:38,514 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-07-19 01:24:38,516] [main] testng.directory = /data
   [testng] [2024-07-19 01:24:38,517] [main] testng.configDirectory = /config
   [testng] [2024-07-19 01:24:38,532] [main] testng.multiplier = 1.0
   [testng] [2024-07-19 01:24:38,532] [main] testng.in-memory = false
   [testng] [2024-07-19 01:24:38,533] [main] testng.allow-missing = false
   [testng] [2024-07-19 01:24:38,533] [main] user.language = en
   [testng] [2024-07-19 01:24:38,533] [main] user.country = ${user.country}
   [testng] [2024-07-19 01:24:38,533] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-07-19 01:24:39,190] [main] ----------------------------------------
   [testng] [2024-07-19 01:24:39,190] [main] Total files: 31
   [testng] [2024-07-19 01:24:39,190] [main] Scan time: 0.657 s (21 ms/file)
   [testng] [2024-07-19 01:24:39,190] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 31 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-07-19 01:24:41,412] [pool-1-thread-1] Initializing /data/bk/ch_00.bmp: 
   [testng] 01:24:41,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:24:41,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,414 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-19_01-24-41.log]
   [testng] 01:24:41,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59aeb1f1 - End of configuration.
   [testng] [2024-07-19 01:24:41,442] [pool-1-thread-12] Initializing /data/dennis/kidney_TFl_Five.bmp: 
   [testng] 01:24:41,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:24:41,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,444 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-19_01-24-41.log]
   [testng] 01:24:41,444 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ab17854 - End of configuration.
   [testng] [2024-07-19 01:24:41,453] [pool-1-thread-11] Initializing /data/ticket-12971/foo.bmp: 
   [testng] 01:24:41,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:24:41,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,454 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-19_01-24-41.log]
   [testng] 01:24:41,455 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f8efc24 - End of configuration.
   [testng] [2024-07-19 01:24:41,461] [pool-1-thread-10] Initializing /data/brian/images/raw_a.bmp: 
   [testng] 01:24:41,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:24:41,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-19_01-24-41.log]
   [testng] 01:24:41,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6679ee4c - End of configuration.
   [testng] [2024-07-19 01:24:41,470] [pool-1-thread-9] Initializing /data/big-images/6kx6k.bmp: 
   [testng] 01:24:41,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:24:41,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-19_01-24-41.log]
   [testng] 01:24:41,471 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f80843a - End of configuration.
   [testng] [2024-07-19 01:24:41,481] [pool-1-thread-8] Initializing /data/brian/images/kidney_TFl_1_greyscale.bmp: 
   [testng] 01:24:41,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:24:41,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-19_01-24-41.log]
   [testng] 01:24:41,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54c24575 - End of configuration.
   [testng] [2024-07-19 01:24:41,488] [pool-1-thread-7] Initializing /data/brian/images/23srp5dksub.bmp: 
   [testng] 01:24:41,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:24:41,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-19_01-24-41.log]
   [testng] 01:24:41,490 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d03f635 - End of configuration.
   [testng] [2024-07-19 01:24:41,501] [pool-1-thread-6] Initializing /data/curtis/image3.bmp: 
   [testng] 01:24:41,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:24:41,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-19_01-24-41.log]
   [testng] 01:24:41,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8890f9f - End of configuration.
   [testng] [2024-07-19 01:24:41,509] [pool-1-thread-5] Initializing /data/big-images/6kx6k-grey.bmp: 
   [testng] 01:24:41,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:24:41,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,510 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-19_01-24-41.log]
   [testng] 01:24:41,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ed47ee7 - End of configuration.
   [testng] [2024-07-19 01:24:41,520] [pool-1-thread-4] Initializing /data/big-images/8kx8k.bmp: 
   [testng] 01:24:41,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:24:41,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,521 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-19_01-24-41.log]
   [testng] 01:24:41,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@186a598 - End of configuration.
   [testng] [2024-07-19 01:24:41,532] [pool-1-thread-3] Initializing /data/dennis/kidney_TFl_One.bmp: 
   [testng] 01:24:41,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:24:41,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,534 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-19_01-24-41.log]
   [testng] 01:24:41,534 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f6f909d - End of configuration.
   [testng] [2024-07-19 01:24:41,543] [pool-1-thread-2] Initializing /data/curtis/image5.bmp: 
   [testng] 01:24:41,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:24:41,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:41,545 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-19_01-24-41.log]
   [testng] 01:24:41,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d511bcd - End of configuration.
   [testng] [2024-07-19 01:24:43,419] [pool-1-thread-2] Initializing /data/curtis/image1.bmp: 
   [testng] [2024-07-19 01:24:43,425] [pool-1-thread-11] Initializing /data/dennis/kidney_TFl_Eight.bmp: 
   [testng] [2024-07-19 01:24:43,433] [pool-1-thread-6] Initializing /data/dennis/kidney_TFl_Seven.bmp: 
   [testng] [2024-07-19 01:24:43,438] [pool-1-thread-10] Initializing /data/curtis/image2.bmp: 
   [testng] [2024-07-19 01:24:43,442] [pool-1-thread-8] Initializing /data/dennis/kidney_TFl_Six.bmp: 
   [testng] [2024-07-19 01:24:43,448] [pool-1-thread-12] Initializing /data/big-images/8kx8k-grey.bmp: 
   [testng] [2024-07-19 01:24:43,456] [pool-1-thread-3] Initializing /data/dennis/kidney_TFl_Three.bmp: 
   [testng] [2024-07-19 01:24:43,462] [pool-1-thread-7] Initializing /data/frank/cell_mask_error.bmp: 
   [testng] [2024-07-19 01:24:44,018] [pool-1-thread-1] Initializing /data/stephane/holo0908.bmp: 
   [testng] [2024-07-19 01:24:44,027] [pool-1-thread-2] Initializing /data/brian/images/raw_a_rg.tiff: 
   [testng] [2024-07-19 01:24:44,173] [pool-1-thread-10] Initializing /data/brian/images/DMSOHigh_001.bmp: 
   [testng] [2024-07-19 01:24:44,443] [pool-1-thread-3] Initializing /data/dennis/kidney_TFl_Two.bmp: 
   [testng] [2024-07-19 01:24:44,450] [pool-1-thread-11] Initializing /data/dennis/kidney_TFl_Four.bmp: 
   [testng] [2024-07-19 01:24:44,455] [pool-1-thread-7] Initializing /data/brian/images/raw_a_rg.bmp: 
   [testng] [2024-07-19 01:24:44,474] [pool-1-thread-8] Initializing /data/curtis/image4.bmp: 
   [testng] [2024-07-19 01:24:44,768] [pool-1-thread-6] Initializing /data/dennis/kidney_TFl_Nine.bmp: 
   [testng] [2024-07-19 01:24:44,920] [pool-1-thread-8] Initializing /data/bk/100427RBTLPC_FD3__A___5_T_001_ch_00_image_00025_Z_001.bmp: 
   [testng] [2024-07-19 01:24:45,020] [pool-1-thread-2] Initializing /data/qa-4538/22577136_Figure 2_A_ATF6 (GST)_13572.bmp: 
   [testng] [2024-07-19 01:24:45,169] [pool-1-thread-7] Initializing /data/brian/images/kidney_TFl_1.bmp: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1643, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 29 seconds
Finished: SUCCESS