Started by upstream project "BIOFORMATS-test-repo" build number 125
originally caused by:
Started by upstream project "Trigger" build number 142
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins14837363712201981208.sh
+ '[' sis = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19571_merge_ci -v /uod/idr/repos/curated/sis:/data -v /uod/idr-scratch/merge-ci/curated/sis:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:56:29,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:56:29,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:56:29,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:56:29,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:56:29,333 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:56:29,334 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:56:29,334 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:56:29,335 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:56:29,335 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 01:56:29,336 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 01:56:29,336 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 488 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-19 01:56:29,351] [main] java.version = 1.8.0_342
[testng] 01:56:29,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:56:29,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:29,623 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-19_01-56-29.log]
[testng] 01:56:29,625 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-19 01:56:29,628] [main] testng.directory = /data
[testng] [2024-07-19 01:56:29,628] [main] testng.configDirectory = /config
[testng] [2024-07-19 01:56:29,654] [main] testng.multiplier = 1.0
[testng] [2024-07-19 01:56:29,654] [main] testng.in-memory = false
[testng] [2024-07-19 01:56:29,654] [main] testng.allow-missing = false
[testng] [2024-07-19 01:56:29,654] [main] user.language = en
[testng] [2024-07-19 01:56:29,654] [main] user.country = ${user.country}
[testng] [2024-07-19 01:56:29,654] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-19 01:56:31,315] [main] ----------------------------------------
[testng] [2024-07-19 01:56:31,315] [main] Total files: 13
[testng] [2024-07-19 01:56:31,315] [main] Scan time: 1.66 s (127 ms/file)
[testng] [2024-07-19 01:56:31,315] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 11 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-19 01:56:34,405] [pool-1-thread-1] Initializing /data/dimitri/ELN-ARM_00049_38.tif:
[testng] 01:56:34,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:56:34,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:34,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-19_01-56-34.log]
[testng] 01:56:34,408 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14e46923 - End of configuration.
[testng] [2024-07-19 01:56:34,502] [pool-1-thread-11] Initializing /data/glen/CG 3.31 10K.tif:
[testng] 01:56:34,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:56:34,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:34,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-19_01-56-34.log]
[testng] 01:56:34,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52a9f885 - End of configuration.
[testng] [2024-07-19 01:56:34,590] [pool-1-thread-10] Initializing /data/glen/L1468a-2_4_15000X.tif:
[testng] 01:56:34,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:56:34,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:34,592 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-19_01-56-34.log]
[testng] 01:56:34,592 |-INFO in ch.qos.logback.core.sift.SiftProcessor@781d523c - End of configuration.
[testng] [2024-07-19 01:56:34,662] [pool-1-thread-9] Initializing /data/glen/L1500k P_3_7500X.tif:
[testng] 01:56:34,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:56:34,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:34,663 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-19_01-56-34.log]
[testng] 01:56:34,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e46156f - End of configuration.
[testng] [2024-07-19 01:56:34,808] [pool-1-thread-8] Initializing /data/glen/L1500k P_4_7500X.tif:
[testng] 01:56:34,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:56:34,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:34,810 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-19_01-56-34.log]
[testng] 01:56:34,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43eb4a9b - End of configuration.
[testng] [2024-07-19 01:56:34,981] [pool-1-thread-7] Initializing /data/pki/Tv2.tif:
[testng] 01:56:34,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:56:34,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:34,984 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-19_01-56-34.log]
[testng] 01:56:34,984 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e2646df - End of configuration.
[testng] [2024-07-19 01:56:35,048] [pool-1-thread-6] Initializing /data/strand/FS44-1-254.tif:
[testng] 01:56:35,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:56:35,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:35,049 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-19_01-56-35.log]
[testng] 01:56:35,050 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44b4ab3e - End of configuration.
[testng] [2024-07-19 01:56:35,130] [pool-1-thread-5] Initializing /data/glen/CG 3.31 20K.tif:
[testng] 01:56:35,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:56:35,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:35,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-19_01-56-35.log]
[testng] 01:56:35,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ff4f51e - End of configuration.
[testng] [2024-07-19 01:56:35,197] [pool-1-thread-4] Initializing /data/glen/CG 3.31 15K.tif:
[testng] 01:56:35,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:56:35,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:35,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-19_01-56-35.log]
[testng] 01:56:35,204 |-INFO in ch.qos.logback.core.sift.SiftProcessor@814354c - End of configuration.
[testng] [2024-07-19 01:56:35,276] [pool-1-thread-3] Initializing /data/russell/Arbacia 2week ADL.tif:
[testng] 01:56:35,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:56:35,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:35,278 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-19_01-56-35.log]
[testng] 01:56:35,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8ce233b - End of configuration.
[testng] [2024-07-19 01:56:35,345] [pool-1-thread-2] Initializing /data/strand/MIA.tif:
[testng] 01:56:35,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:56:35,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:35,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-19_01-56-35.log]
[testng] 01:56:35,349 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21b2750e - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 583, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 22 seconds
Finished: SUCCESS