Started by upstream project "BIOFORMATS-test-repo" build number 125
originally caused by:
 Started by upstream project "Trigger" build number 142
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins1603828922404234699.sh
+ '[' mrw = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19584_merge_ci -v /uod/idr/repos/curated/mrw:/data -v /uod/idr-scratch/merge-ci/curated/mrw:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:13:10,246 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:13:10,248 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 02:13:10,248 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:13:10,250 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:13:10,250 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:13:10,250 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:13:10,250 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:13:10,250 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:13:10,251 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:13:10,251 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:13:10,251 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:13:10,251 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:13:10,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:13:10,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:13:10,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:13:10,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:13:10,543 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:13:10,543 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:13:10,543 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:13:10,544 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:13:10,544 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 02:13:10,545 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 02:13:10,545 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 294 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-07-19 02:13:10,592] [main] java.version = 1.8.0_342
   [testng] 02:13:10,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:13:10,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:10,645 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-19_02-13-10.log]
   [testng] 02:13:10,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-07-19 02:13:10,648] [main] testng.directory = /data
   [testng] [2024-07-19 02:13:10,649] [main] testng.configDirectory = /config
   [testng] [2024-07-19 02:13:10,661] [main] testng.multiplier = 1.0
   [testng] [2024-07-19 02:13:10,661] [main] testng.in-memory = false
   [testng] [2024-07-19 02:13:10,661] [main] testng.allow-missing = false
   [testng] [2024-07-19 02:13:10,661] [main] user.language = en
   [testng] [2024-07-19 02:13:10,661] [main] user.country = ${user.country}
   [testng] [2024-07-19 02:13:10,661] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-07-19 02:13:11,331] [main] ----------------------------------------
   [testng] [2024-07-19 02:13:11,331] [main] Total files: 19
   [testng] [2024-07-19 02:13:11,331] [main] Scan time: 0.669 s (35 ms/file)
   [testng] [2024-07-19 02:13:11,331] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 19 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-07-19 02:13:12,904] [pool-1-thread-1] Initializing /data/samples/05-Sep-11_nyc_swiatla_0612.mrw: 
   [testng] 02:13:12,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:13:12,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:12,906 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-19_02-13-12.log]
   [testng] 02:13:12,906 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f131802 - End of configuration.
   [testng] [2024-07-19 02:13:12,940] [pool-1-thread-12] Initializing /data/samples/05-Aug-21_duperele_0353.mrw: 
   [testng] 02:13:12,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:13:12,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:12,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-19_02-13-12.log]
   [testng] 02:13:12,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7eae0383 - End of configuration.
   [testng] [2024-07-19 02:13:12,992] [pool-1-thread-11] Initializing /data/samples/05-Sep-07_nyc_0531.mrw: 
   [testng] 02:13:12,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:13:12,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:12,993 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-19_02-13-12.log]
   [testng] 02:13:12,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ff158fa - End of configuration.
   [testng] [2024-07-19 02:13:13,015] [pool-1-thread-10] Initializing /data/samples/100R PICT0001.MRW: 
   [testng] 02:13:13,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:13:13,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,016 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-19_02-13-13.log]
   [testng] 02:13:13,016 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f2c7139 - End of configuration.
   [testng] [2024-07-19 02:13:13,037] [pool-1-thread-9] Initializing /data/samples/05-Sep-22_statua_0800.mrw: 
   [testng] 02:13:13,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:13:13,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-19_02-13-13.log]
   [testng] 02:13:13,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@560badc - End of configuration.
   [testng] [2024-07-19 02:13:13,061] [pool-1-thread-8] Initializing /data/samples/200R PICT0002.MRW: 
   [testng] 02:13:13,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:13:13,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-19_02-13-13.log]
   [testng] 02:13:13,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@353f44fd - End of configuration.
   [testng] [2024-07-19 02:13:13,163] [pool-1-thread-7] Initializing /data/samples/1600R PICT0005.MRW: 
   [testng] 02:13:13,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:13:13,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,164 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-19_02-13-13.log]
   [testng] 02:13:13,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@641cfe50 - End of configuration.
   [testng] [2024-07-19 02:13:13,193] [pool-1-thread-6] Initializing /data/samples/05-Aug-17_bokeh_0215_400.mrw: 
   [testng] 02:13:13,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:13:13,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,194 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-19_02-13-13.log]
   [testng] 02:13:13,195 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a473ed6 - End of configuration.
   [testng] [2024-07-19 02:13:13,223] [pool-1-thread-5] Initializing /data/samples/05-Sep-14_sigma_0698.mrw: 
   [testng] 02:13:13,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:13:13,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,224 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-19_02-13-13.log]
   [testng] 02:13:13,225 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46dd3e2e - End of configuration.
   [testng] [2024-07-19 02:13:13,246] [pool-1-thread-4] Initializing /data/samples/400R PICT0003.MRW: 
   [testng] 02:13:13,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:13:13,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,247 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-19_02-13-13.log]
   [testng] 02:13:13,248 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55a3deb0 - End of configuration.
   [testng] [2024-07-19 02:13:13,275] [pool-1-thread-3] Initializing /data/samples/05-Sep-11_nyc_swiatla_0619.mrw: 
   [testng] 02:13:13,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:13:13,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-19_02-13-13.log]
   [testng] 02:13:13,276 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e56cd36 - End of configuration.
   [testng] [2024-07-19 02:13:13,510] [pool-1-thread-2] Initializing /data/samples/05-Sep-10_nyc_swiatla_0584.mrw: 
   [testng] 02:13:13,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:13:13,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:13:13,511 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-19_02-13-13.log]
   [testng] 02:13:13,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76930c7a - End of configuration.
   [testng] [2024-07-19 02:13:21,049] [pool-1-thread-9] Initializing /data/samples/05-Sep-22_statua_0818.mrw: 
   [testng] [2024-07-19 02:13:21,074] [pool-1-thread-1] Initializing /data/samples/800R PICT0010.MRW: 
   [testng] [2024-07-19 02:13:21,102] [pool-1-thread-5] Initializing /data/samples/05-Aug-17_bokeh_0214_400.mrw: 
   [testng] [2024-07-19 02:13:21,124] [pool-1-thread-8] Initializing /data/samples/05-Sep-03_duperele_0472.mrw: 
   [testng] [2024-07-19 02:13:21,150] [pool-1-thread-11] Initializing /data/samples/05-Sep-22_statua_0837.mrw: 
   [testng] [2024-07-19 02:13:21,174] [pool-1-thread-12] Initializing /data/samples/05-Aug-17_manhatan_0321.mrw: 
   [testng] [2024-07-19 02:13:21,204] [pool-1-thread-3] Initializing /data/samples/3200R PICT0006.MRW: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1007, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 18 seconds
Finished: SUCCESS