Started by upstream project "BIOFORMATS-test-repo" build number 125
originally caused by:
Started by upstream project "Trigger" build number 142
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins15728999775330389090.sh
+ '[' leica-lif = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19648_merge_ci -v /uod/idr/repos/curated/leica-lif:/data -v /uod/idr-scratch/merge-ci/curated/leica-lif:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:53:03,944 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:53:03,946 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 02:53:03,946 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:53:03,948 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:53:03,948 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:53:03,948 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:53:03,948 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:53:03,948 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:53:03,949 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:53:03,949 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:53:03,949 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:53:03,950 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:53:04,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:53:04,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:53:04,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:53:04,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:53:04,223 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:53:04,224 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:53:04,224 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:53:04,224 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:53:04,224 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 02:53:04,225 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 02:53:04,225 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 276 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-19 02:53:04,235] [main] java.version = 1.8.0_342
[testng] 02:53:04,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:53:04,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:53:04,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-19_02-53-04.log]
[testng] 02:53:04,300 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-19 02:53:04,302] [main] testng.directory = /data
[testng] [2024-07-19 02:53:04,302] [main] testng.configDirectory = /config
[testng] [2024-07-19 02:53:04,315] [main] testng.multiplier = 1.0
[testng] [2024-07-19 02:53:04,315] [main] testng.in-memory = false
[testng] [2024-07-19 02:53:04,315] [main] testng.allow-missing = false
[testng] [2024-07-19 02:53:04,315] [main] user.language = en
[testng] [2024-07-19 02:53:04,315] [main] user.country = ${user.country}
[testng] [2024-07-19 02:53:04,315] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-19 02:56:58,302] [main] ----------------------------------------
[testng] [2024-07-19 02:56:58,303] [main] Total files: 402
[testng] [2024-07-19 02:56:58,303] [main] Scan time: 233.987 s (582 ms/file)
[testng] [2024-07-19 02:56:58,303] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 266 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-19 02:58:35,208] [pool-1-thread-1] Initializing /data/kristine/Kristine.lif:
[testng] 02:58:35,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:58:35,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,210 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-19_02-58-35.log]
[testng] 02:58:35,211 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ff719af - End of configuration.
[testng] [2024-07-19 02:58:35,548] [pool-1-thread-12] Initializing /data/andrew/Par6 GFP delaminating cells.lif:
[testng] 02:58:35,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:58:35,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,550 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-19_02-58-35.log]
[testng] 02:58:35,550 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d5c63a8 - End of configuration.
[testng] [2024-07-19 02:58:35,697] [pool-1-thread-11] Initializing /data/qa-6635/2013_03_01_MLH1_SYCP3_HSPA2_16dpc_SC.lif:
[testng] 02:58:35,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:58:35,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,698 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-19_02-58-35.log]
[testng] 02:58:35,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c88cc17 - End of configuration.
[testng] [2024-07-19 02:58:35,772] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y7.tif:
[testng] 02:58:35,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:58:35,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,773 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-19_02-58-35.log]
[testng] 02:58:35,774 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e65997b - End of configuration.
[testng] [2024-07-19 02:58:35,838] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y5.tif:
[testng] 02:58:35,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:58:35,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-19_02-58-35.log]
[testng] 02:58:35,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30f4410f - End of configuration.
[testng] [2024-07-19 02:58:35,898] [pool-1-thread-8] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP003_10um.png:
[testng] 02:58:35,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:58:35,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,899 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-19_02-58-35.log]
[testng] 02:58:35,899 |-INFO in ch.qos.logback.core.sift.SiftProcessor@786ccf34 - End of configuration.
[testng] [2024-07-19 02:58:35,913] [pool-1-thread-7] Initializing /data/michael/2007-01-02_scanfield_check.lif:
[testng] 02:58:35,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:58:35,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-19_02-58-35.log]
[testng] 02:58:35,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4973e3dc - End of configuration.
[testng] [2024-07-19 02:58:35,974] [pool-1-thread-6] Initializing /data/stefan/3D_Prionium_thick_stack.lif:
[testng] 02:58:35,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:58:35,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:35,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-19_02-58-35.log]
[testng] 02:58:35,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d409c0c - End of configuration.
[testng] [2024-07-19 02:58:36,080] [pool-1-thread-5] Initializing /data/qa-10917/P2P-MS2-lacZ.lif:
[testng] 02:58:36,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:58:36,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:36,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-19_02-58-36.log]
[testng] 02:58:36,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@418260db - End of configuration.
[testng] [2024-07-19 02:58:36,188] [pool-1-thread-4] Initializing /data/pki/RA4 P3 x63.lif:
[testng] 02:58:36,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:58:36,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:36,189 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-19_02-58-36.log]
[testng] 02:58:36,190 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ffd673 - End of configuration.
[testng] [2024-07-19 02:58:36,216] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y1.tif:
[testng] 02:58:36,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:58:36,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:36,217 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-19_02-58-36.log]
[testng] 02:58:36,218 |-INFO in ch.qos.logback.core.sift.SiftProcessor@493004cb - End of configuration.
[testng] [2024-07-19 02:58:36,289] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y0.tif:
[testng] 02:58:36,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:58:36,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:36,290 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-19_02-58-36.log]
[testng] 02:58:36,291 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a44009 - End of configuration.
[testng] [2024-07-19 02:58:39,420] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y6.tif:
[testng] [2024-07-19 02:58:39,438] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y8.tif:
[testng] [2024-07-19 02:58:39,477] [pool-1-thread-10] Initializing /data/melissa/Series001_z1.tif:
[testng] [2024-07-19 02:58:39,504] [pool-1-thread-9] Initializing /data/jcb/201007044/Figure 4D - F761.lif:
[testng] [2024-07-19 02:58:39,515] [pool-1-thread-3] Initializing /data/donald/DB180509_LSMdemo.lif:
[testng] [2024-07-19 02:58:39,581] [pool-1-thread-4] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch3.avi:
[testng] [2024-07-19 02:58:39,602] [pool-1-thread-8] Initializing /data/tony/December_806b.lif:
[testng] [2024-07-19 02:58:39,667] [pool-1-thread-2] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch3.avi:
[testng] [2024-07-19 02:58:40,203] [pool-1-thread-9] Initializing /data/tony/Scanerror-nested.lif:
[testng] [2024-07-19 02:58:40,228] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y6.tif:
[testng] [2024-07-19 02:58:40,400] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y2.tif:
[testng] [2024-07-19 02:58:40,441] [pool-1-thread-4] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP002_5um.png:
[testng] [2024-07-19 02:58:40,544] [pool-1-thread-10] Initializing /data/rich/TEST.lif:
[testng] [2024-07-19 02:58:40,676] [pool-1-thread-11] Initializing /data/andrew/LIF Lambda/Image J Grab.tiff:
[testng] [2024-07-19 02:58:40,824] [pool-1-thread-7] Initializing /data/ki/Experiment_001.lif:
[testng] [2024-07-19 02:58:41,033] [pool-1-thread-6] Initializing /data/olivier/120404_Li011_200V.lif:
[testng] [2024-07-19 02:58:41,107] [pool-1-thread-10] Initializing /data/stefan/Rx3GFP280907.lif:
[testng] [2024-07-19 02:58:41,677] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y4.tif:
[testng] [2024-07-19 02:58:41,741] [pool-1-thread-2] Initializing /data/christian/20090323illutest_BFmisaligned.lif:
[testng] [2024-07-19 02:58:41,874] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y7.tif:
[testng] [2024-07-19 02:58:41,998] [pool-1-thread-8] Initializing /data/fabrice/Clipboard-1.jpg:
[testng] [2024-07-19 02:58:42,342] [pool-1-thread-1] Initializing /data/qa-16911/DM6000_colour-camera-12bit.lif:
[testng] [2024-07-19 02:58:42,367] [pool-1-thread-6] Initializing /data/vytas/data samples.lif:
[testng] [2024-07-19 02:58:42,498] [pool-1-thread-8] Initializing /data/alexander/20120224.lif:
[testng] [2024-07-19 02:58:42,595] [pool-1-thread-9] Initializing /data/sagar/c55 scatter stage 14.lif:
[testng] [2024-07-19 02:58:42,890] [pool-1-thread-2] Initializing /data/schek/Experiment_001_2010.lif:
[testng] [2024-07-19 02:58:43,132] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y5.tif:
[testng] [2024-07-19 02:58:43,206] [pool-1-thread-11] Initializing /data/jcb/JCB 201203109/FIG2D STAT3-EYFP BDNF.lif:
[testng] [2024-07-19 02:58:43,289] [pool-1-thread-5] Initializing /data/stefan/spe.tif:
[testng] [2024-07-19 02:58:43,584] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y3.tif:
[testng] [2024-07-19 02:58:43,647] [pool-1-thread-4] Initializing /data/vytas/Series008_t000_ch00.tif:
[testng] [2024-07-19 02:58:44,091] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y3.tif:
[testng] [2024-07-19 02:58:44,363] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y2.tif:
[testng] [2024-07-19 02:58:44,591] [pool-1-thread-2] Initializing /data/jerome/E346_268_cutceaf.lif:
[testng] [2024-07-19 02:58:44,730] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y1.tif:
[testng] [2024-07-19 02:58:44,829] [pool-1-thread-5] Initializing /data/mario/2007-11-12_L15_AF001.lif:
[testng] [2024-07-19 02:58:44,938] [pool-1-thread-11] Initializing /data/melissa/roi-test-1.xml:
[testng] [2024-07-19 02:58:44,993] [pool-1-thread-6] Initializing /data/andrew/New XZY LIF Upload/Right Order/Right Order Montage.tif:
[testng] [2024-07-19 02:58:45,139] [pool-1-thread-12] Initializing /data/melissa/LIF2_test-with-ROIs.lif:
[testng] [2024-07-19 02:58:45,247] [pool-1-thread-3] Initializing /data/andrew/LIF Lambda/Montage of Alexa 488 Lambda.tif:
[testng] [2024-07-19 02:58:45,299] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y7.tif:
[testng] [2024-07-19 02:58:45,576] [pool-1-thread-11] Initializing /data/public/imagesc-30856/20191025 Test FRET 585. 423, 426.lif:
[testng] [2024-07-19 02:58:45,652] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y5.tif:
[testng] [2024-07-19 02:58:46,211] [pool-1-thread-10] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch2.avi:
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[testng] [2024-07-19 02:58:47,648] [pool-1-thread-9] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP000_1um.png:
[testng] [2024-07-19 02:58:47,740] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y8.tif:
[testng] [2024-07-19 02:58:47,787] [pool-1-thread-10] Initializing /data/fabrice/new/Experiment.lif:
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[testng] [2024-07-19 02:58:49,565] [pool-1-thread-10] Initializing /data/tommaso/Midollo GFAP 27.10.10 OXA+PEA 40x.lif:
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[testng] [2024-07-19 02:58:51,829] [pool-1-thread-4] Initializing /data/peter/20110916D.lif:
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[testng] [2024-07-19 02:58:54,275] [pool-1-thread-12] Initializing /data/olivier/tiled/Mike.lif:
[testng] [2024-07-19 02:58:54,509] [pool-1-thread-6] Initializing /data/garcion/testTwo.lif:
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[testng] [2024-07-19 02:58:56,434] [pool-1-thread-8] Initializing /data/jean-marie/20100827G1.lif:
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[testng] [2024-07-19 02:58:57,023] [pool-1-thread-9] Initializing /data/christophe/test_greys_with_roi.lif:
[testng] [2024-07-19 02:58:59,510] [pool-1-thread-11] Initializing /data/stefan/Rx3GFP280907pos003.lif:
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[testng] [2024-07-19 02:58:59,695] [pool-1-thread-2] Initializing /data/ian/TGN647sh-GM130-532_10mMEA_03.lif:
[testng] [2024-07-19 02:58:59,803] [pool-1-thread-7] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/150519_FRAP_test_ROIs_chromagreen.lif:
[testng] [2024-07-19 02:58:59,939] [pool-1-thread-9] Initializing /data/dirk/Mag-test.lif:
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[testng] [2024-07-19 02:59:02,868] [pool-1-thread-12] Initializing /data/melissa/roi-test-0.lif:
[testng] [2024-07-19 02:59:03,011] [pool-1-thread-7] Initializing /data/andrew/LIF Lambda/Lambda 1.lif:
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[testng] [2024-07-19 02:59:03,711] [pool-1-thread-9] Initializing /data/richard/resolution check.lif:
[testng] [2024-07-19 02:59:03,749] [pool-1-thread-12] Initializing /data/claude/Short_1A.lif:
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[testng] [2024-07-19 02:59:04,693] [pool-1-thread-9] Initializing /data/qa-3859/LSItoday.lif:
[testng] [2024-07-19 02:59:04,809] [pool-1-thread-8] Initializing /data/stefan/exp02.lif:
[testng] [2024-07-19 02:59:04,899] [pool-1-thread-1] Initializing /data/andrew/Series 68 Multi from Image Sequence.tif:
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[testng] [2024-07-19 02:59:06,422] [pool-1-thread-8] Initializing /data/andrew/SP5 FRAP/ROI data.jpg:
[testng] [2024-07-19 02:59:07,050] [pool-1-thread-2] Initializing /data/jcb/201007044/Figure 4C - F505.lif:
[testng] [2024-07-19 02:59:07,247] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y3.tif:
[testng] [2024-07-19 02:59:07,495] [pool-1-thread-1] Initializing /data/vytas/LIFtest.lif:
[testng] [2024-07-19 02:59:07,522] [pool-1-thread-7] Initializing /data/jerome/E346_316.lif:
[testng] [2024-07-19 02:59:08,376] [pool-1-thread-1] Initializing /data/vytas/2014/2nd MeBl30 200MEA plus bkpmp end.lif:
[testng] [2024-07-19 02:59:08,683] [pool-1-thread-6] Initializing /data/schek/Experiment_001.lif:
[testng] [2024-07-19 02:59:08,795] [pool-1-thread-3] Initializing /data/andrew/FRAP_Test_250708.lif:
[testng] [2024-07-19 02:59:08,887] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y8.tif:
[testng] [2024-07-19 02:59:08,949] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y6.tif:
[testng] [2024-07-19 02:59:10,861] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y1.tif:
[testng] [2024-07-19 02:59:10,972] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y2.tif:
[testng] [2024-07-19 02:59:12,422] [pool-1-thread-8] Initializing /data/mark/Leica_FRAP_1channel_noZ-stack.lif:
[testng] [2024-07-19 02:59:12,460] [pool-1-thread-2] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch1.avi:
[testng] [2024-07-19 02:59:12,489] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y3.tif:
[testng] [2024-07-19 02:59:13,756] [pool-1-thread-1] Initializing /data/vytas/Experimenttest2.lif:
[testng] [2024-07-19 02:59:13,804] [pool-1-thread-2] Initializing /data/stefan/spe.lif:
[testng] [2024-07-19 02:59:13,830] [pool-1-thread-11] Initializing /data/jcb/JCB 201112145/Figure 3A.lif:
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[testng] [2024-07-19 02:59:13,915] [pool-1-thread-9] Initializing /data/jcb/JCB 201112145/Figure 5B.lif:
[testng] [2024-07-19 02:59:14,523] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y5.tif:
[testng] [2024-07-19 02:59:14,589] [pool-1-thread-9] Initializing /data/fabrice/test 2.lif:
[testng] [2024-07-19 02:59:14,663] [pool-1-thread-8] Initializing /data/fabrice/09-10-23 Tete de mouche.lif:
[testng] [2024-07-19 02:59:14,739] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Wrong Order Merge.avi:
[testng] [2024-07-19 02:59:14,832] [pool-1-thread-2] Initializing /data/ville/single_channel.lif:
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[testng] [2024-07-19 02:59:15,769] [pool-1-thread-7] Initializing /data/schek/LIF2_test.lif:
[testng] [2024-07-19 02:59:15,790] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y0.tif:
[testng] [2024-07-19 02:59:15,965] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y4.tif:
[testng] [2024-07-19 02:59:16,008] [pool-1-thread-11] Initializing /data/tony/Scanerror.lif:
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[testng] [2024-07-19 02:59:16,303] [pool-1-thread-7] Initializing /data/christophe/070921_HN_Nav.lif:
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[testng] [2024-07-19 02:59:16,768] [pool-1-thread-1] Initializing /data/vytas/030510-esxA-mCherry 3.lif:
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[testng] [2024-07-19 02:59:17,701] [pool-1-thread-8] Initializing /data/alex/2010-11-29-test-for-OME.lif:
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[testng] [2024-07-19 02:59:18,148] [pool-1-thread-9] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch2.avi:
[testng] [2024-07-19 02:59:18,250] [pool-1-thread-8] Initializing /data/melissa/roi-test-1.lif:
[testng] [2024-07-19 02:59:18,273] [pool-1-thread-11] Initializing /data/martin-hoehne/Niere-Schnitt5.lif:
[testng] [2024-07-19 02:59:18,375] [pool-1-thread-6] Initializing /data/qa-21092/1-GBP1-CaaX+LLoMe.lif:
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[testng] [2024-07-19 02:59:18,712] [pool-1-thread-3] Initializing /data/vytas/20x deconvol demo.lif:
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[testng] [2024-07-19 02:59:18,910] [pool-1-thread-11] Initializing /data/martin/110921 Goedele.lif:
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[testng] [2024-07-19 02:59:19,786] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y1.tif:
[testng] [2024-07-19 02:59:19,827] [pool-1-thread-9] Initializing /data/mario/2007-11-13_DMEM_GFPcells.lif:
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[testng] [2024-07-19 02:59:19,982] [pool-1-thread-8] Initializing /data/ville/expected output.png:
[testng] [2024-07-19 02:59:20,089] [pool-1-thread-6] Initializing /data/donald/DB_lambda_scans_Ab1_50 030809.lif:
[testng] [2024-07-19 02:59:20,752] [pool-1-thread-2] Initializing /data/stefan/p24_dfc.lif:
[testng] [2024-07-19 02:59:20,772] [pool-1-thread-10] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Merge.avi:
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[testng] [2024-07-19 02:59:20,855] [pool-1-thread-7] Initializing /data/chris/kees_friday2.lif:
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[testng] [2024-07-19 02:59:23,027] [pool-1-thread-8] Initializing /data/oliver/Single Channel Measurements.lif:
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[testng] [2024-07-19 02:59:23,511] [pool-1-thread-2] Initializing /data/pascal/test.lif:
[testng] [2024-07-19 02:59:23,800] [pool-1-thread-7] Initializing /data/andrew/Snapshots_1kx1k_150908.lif:
[testng] [2024-07-19 02:59:24,216] [pool-1-thread-6] Initializing /data/martin-hoehne/Niere-Schnitt-GFP-dTomato.lif:
[testng] [2024-07-19 02:59:24,510] [pool-1-thread-10] Initializing /data/qa-16919/DM6000_colour-camera-8bit.lif:
[testng] [2024-07-19 02:59:26,057] [pool-1-thread-2] Initializing /data/vytas/B6 mo2 g9c8 act tc DiD 20mil 24hrs after inj rbc DiI.lif:
[testng] [2024-07-19 02:59:27,213] [pool-1-thread-11] Initializing /data/kota/int_ok.lif:
[testng] [2024-07-19 02:59:28,917] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y9.tif:
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[testng] [2024-07-19 02:59:29,416] [pool-1-thread-3] Initializing /data/jcb/JCB 201203109/FIG 2D STAT3-EYFP CNTF.lif:
[testng] [2024-07-19 02:59:29,798] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y8.tif:
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[testng] [2024-07-19 02:59:30,560] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y5.tif:
[testng] [2024-07-19 02:59:30,746] [pool-1-thread-7] Initializing /data/stefan/actinFRAP.lif:
[testng] [2024-07-19 02:59:31,073] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y4.tif:
[testng] [2024-07-19 02:59:31,205] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y7.tif:
[testng] [2024-07-19 02:59:31,310] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch1.avi:
[testng] [2024-07-19 02:59:31,408] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y7.tif:
[testng] [2024-07-19 02:59:31,555] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y0.tif:
[testng] [2024-07-19 02:59:31,781] [pool-1-thread-7] Initializing /data/olivier/tiled/bob.lif:
[testng] [2024-07-19 02:59:32,283] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y5.tif:
[testng] [2024-07-19 02:59:32,422] [pool-1-thread-8] Initializing /data/andrew/Snapshots_150908.lif:
[testng] [2024-07-19 02:59:32,822] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y4.tif:
[testng] [2024-07-19 02:59:32,872] [pool-1-thread-3] Initializing /data/qa-4791/TestFlorianDescription2.lif:
[testng] [2024-07-19 02:59:32,963] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y5.tif:
[testng] [2024-07-19 02:59:33,101] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y9.tif:
[testng] [2024-07-19 02:59:33,161] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y2.tif:
[testng] [2024-07-19 02:59:33,704] [pool-1-thread-6] Initializing /data/vytas/Image002_ch00.tif:
[testng] [2024-07-19 02:59:33,810] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y3.tif:
[testng] [2024-07-19 02:59:33,966] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y3.tif:
[testng] [2024-07-19 02:59:34,011] [pool-1-thread-11] Initializing /data/melissa/Series001_z0.tif:
[testng] [2024-07-19 02:59:34,044] [pool-1-thread-1] Initializing /data/pki/20111116preCK50.lif:
[testng] [2024-07-19 02:59:34,464] [pool-1-thread-6] Initializing /data/matthias/ms-beats.lif:
[testng] [2024-07-19 02:59:34,594] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y6.tif:
[testng] [2024-07-19 02:59:34,710] [pool-1-thread-10] Initializing /data/leon/leon002.lif:
[testng] [2024-07-19 02:59:34,736] [pool-1-thread-6] Initializing /data/stefan/p24b.lif:
[testng] [2024-07-19 02:59:34,939] [pool-1-thread-3] Initializing /data/sagar/forMelissa.lif:
[testng] [2024-07-19 02:59:35,109] [pool-1-thread-10] Initializing /data/fabrice/new/UL66 bicolore stacks + merge.lif:
[testng] [2024-07-19 02:59:35,191] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y6.tif:
[testng] [2024-07-19 02:59:35,400] [pool-1-thread-11] Initializing /data/matthias/experiment_020.lif:
[testng] [2024-07-19 02:59:35,435] [pool-1-thread-3] Initializing /data/olivier/STAGE CONFIG1.lif:
[testng] [2024-07-19 02:59:36,041] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y6.tif:
[testng] [2024-07-19 02:59:36,100] [pool-1-thread-6] Initializing /data/jerome/E345_312.lif:
[testng] [2024-07-19 02:59:36,206] [pool-1-thread-3] Initializing /data/tony/Celegeansexp01.lif:
[testng] [2024-07-19 02:59:36,947] [pool-1-thread-8] Initializing /data/andrew/FRAP_Test_12-0808.lif:
[testng] [2024-07-19 02:59:37,074] [pool-1-thread-11] Initializing /data/andrew/New XZY LIF Upload/XZY Stacks.lif:
[testng] [2024-07-19 02:59:44,862] [pool-1-thread-2] Initializing /data/christophe/test_greys.lif:
[testng] [2024-07-19 02:59:44,875] [pool-1-thread-11] Initializing /data/romain/tile 002.lif:
[testng] [2024-07-19 02:59:44,918] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y4.tif:
[testng] [2024-07-19 02:59:44,954] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y5.tif:
[testng] [2024-07-19 02:59:44,989] [pool-1-thread-3] Initializing /data/stefan/Experiment.lif:
[testng] [2024-07-19 02:59:45,243] [pool-1-thread-6] Initializing /data/andrew/SP5 FRAP/220311 FRAP YFP test.lif:
[testng] [2024-07-19 02:59:46,033] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y4.tif:
[testng] [2024-07-19 02:59:46,292] [pool-1-thread-10] Initializing /data/oliver/100529.lif:
[testng] [2024-07-19 02:59:46,926] [pool-1-thread-8] Initializing /data/andrew/LIF Lambda/Lambda 1 file grab.bmp:
[testng] [2024-07-19 02:59:47,280] [pool-1-thread-3] Initializing /data/matthias/ms-first tests.lif:
[testng] [2024-07-19 02:59:48,436] [pool-1-thread-2] Initializing /data/matthias/directory_tree.jpg:
[testng] [2024-07-19 02:59:48,800] [pool-1-thread-2] Initializing /data/vytas/Experiment2.lif:
[testng] [2024-07-19 02:59:48,854] [pool-1-thread-6] Initializing /data/christophe/01_4C1Z.lif:
[testng] [2024-07-19 02:59:49,252] [pool-1-thread-9] Initializing /data/sebastian/sebHaase.lif:
[testng] [2024-07-19 02:59:49,293] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y1.tif:
[testng] [2024-07-19 02:59:49,446] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y2.tif:
[testng] [2024-07-19 02:59:49,842] [pool-1-thread-9] Initializing /data/tony/20070413FLIMtest.lif:
[testng] [2024-07-19 02:59:50,147] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y7.tif:
[testng] [2024-07-19 02:59:50,221] [pool-1-thread-6] Initializing /data/melissa/roi-test-0.tif:
[testng] [2024-07-19 02:59:50,375] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y0.tif:
[testng] [2024-07-19 02:59:50,407] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y0.tif:
[testng] [2024-07-19 02:59:50,469] [pool-1-thread-9] Initializing /data/jcb/JCB 201112145/Figure 5A.lif:
[testng] [2024-07-19 02:59:50,499] [pool-1-thread-1] Initializing /data/claude/4B.lif:
[testng] [2024-07-19 02:59:51,651] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y6.tif:
[testng] [2024-07-19 02:59:51,696] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y0.tif:
[testng] [2024-07-19 02:59:51,735] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y2.tif:
[testng] [2024-07-19 02:59:51,844] [pool-1-thread-3] Initializing /data/sebastian/sebHaase2.lif:
[testng] [2024-07-19 02:59:52,011] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y7.tif:
[testng] [2024-07-19 02:59:52,060] [pool-1-thread-10] Initializing /data/qa-10980/Day 2 Chitin Kan.lif:
[testng] [2024-07-19 02:59:53,559] [pool-1-thread-8] Initializing /data/stefan/p24b-v1240.lif:
[testng] [2024-07-19 02:59:53,593] [pool-1-thread-6] Initializing /data/martin/stack dapi-Alx568-reflectiveSnapshot All2.jpg:
[testng] [2024-07-19 02:59:53,635] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y3.tif:
[testng] [2024-07-19 02:59:53,808] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y9.tif:
[testng] [2024-07-19 02:59:53,882] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y9.tif:
[testng] [2024-07-19 02:59:54,244] [pool-1-thread-8] Initializing /data/jcb/201003021_Fig8B.lif:
[testng] [2024-07-19 02:59:54,637] [pool-1-thread-6] Initializing /data/fabrice/Clipboard.jpg:
[testng] [2024-07-19 02:59:54,758] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y6.tif:
[testng] [2024-07-19 02:59:54,804] [pool-1-thread-2] Initializing /data/fabrice/test 1.lif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 14098, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 minutes 46 seconds
Finished: SUCCESS