Started by upstream project "BIOFORMATS-test-repo" build number 126
originally caused by:
 Started by upstream project "Trigger" build number 143
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins1381212760005466595.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_19742_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 02:04:32,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:04:32,530 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 02:04:32,530 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:04:32,531 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:04:32,532 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:04:32,532 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:04:32,533 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:04:32,533 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:04:32,533 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:04:32,534 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:04:32,534 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:04:32,535 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:04:32,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:04:32,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:04:32,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:04:32,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:04:32,734 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:04:32,735 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:04:32,735 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:04:32,735 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:04:32,735 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 02:04:32,736 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 02:04:32,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 204 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-07-20 02:04:32,749] [main] java.version = 11.0.16
   [testng] 02:04:32,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:04:32,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:32,794 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-20_02-04-32.log]
   [testng] 02:04:32,795 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-07-20 02:04:32,797] [main] testng.directory = /data
   [testng] [2024-07-20 02:04:32,797] [main] testng.configDirectory = /config
   [testng] [2024-07-20 02:04:32,807] [main] testng.multiplier = 1.0
   [testng] [2024-07-20 02:04:32,808] [main] testng.in-memory = false
   [testng] [2024-07-20 02:04:32,809] [main] testng.allow-missing = false
   [testng] [2024-07-20 02:04:32,809] [main] user.language = en
   [testng] [2024-07-20 02:04:32,809] [main] user.country = ${user.country}
   [testng] [2024-07-20 02:04:32,809] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-07-20 02:04:40,912] [main] ----------------------------------------
   [testng] [2024-07-20 02:04:40,912] [main] Total files: 268
   [testng] [2024-07-20 02:04:40,913] [main] Scan time: 8.103 s (30 ms/file)
   [testng] [2024-07-20 02:04:40,913] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 160 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-07-20 02:04:49,806] [pool-1-thread-1] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM: 
   [testng] 02:04:49,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:04:49,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:49,809 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-20_02-04-49.log]
   [testng] 02:04:49,809 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63651d7e - End of configuration.
   [testng] [2024-07-20 02:04:49,867] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm: 
   [testng] 02:04:49,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:04:49,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:49,868 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-20_02-04-49.log]
   [testng] 02:04:49,868 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72752eb9 - End of configuration.
   [testng] [2024-07-20 02:04:49,889] [pool-1-thread-11] Initializing /data/steve/Philips (Markus G)/135-30.IMG: 
   [testng] 02:04:49,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:04:49,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:49,890 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-20_02-04-49.log]
   [testng] 02:04:49,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43a7d7c - End of configuration.
   [testng] [2024-07-20 02:04:49,914] [pool-1-thread-10] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF: 
   [testng] 02:04:49,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:04:49,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:49,915 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-20_02-04-49.log]
   [testng] 02:04:49,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5161eacf - End of configuration.
   [testng] [2024-07-20 02:04:49,956] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2: 
   [testng] 02:04:49,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:04:49,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:49,957 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-20_02-04-49.log]
   [testng] 02:04:49,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16bb8175 - End of configuration.
   [testng] [2024-07-20 02:04:49,969] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif: 
   [testng] 02:04:49,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:04:49,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:49,971 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-20_02-04-49.log]
   [testng] 02:04:49,971 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19a19720 - End of configuration.
   [testng] [2024-07-20 02:04:50,013] [pool-1-thread-7] Initializing /data/steve/TIFF/ta269 TIFF: 
   [testng] 02:04:50,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:04:50,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:50,014 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-20_02-04-50.log]
   [testng] 02:04:50,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e6ed29e - End of configuration.
   [testng] [2024-07-20 02:04:50,034] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm: 
   [testng] 02:04:50,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:04:50,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:50,035 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-20_02-04-50.log]
   [testng] 02:04:50,035 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45157c8c - End of configuration.
   [testng] [2024-07-20 02:04:50,052] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2: 
   [testng] 02:04:50,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:04:50,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:50,052 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-20_02-04-50.log]
   [testng] 02:04:50,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4dacb45d - End of configuration.
   [testng] [2024-07-20 02:04:50,064] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3: 
   [testng] 02:04:50,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:04:50,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:50,065 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-20_02-04-50.log]
   [testng] 02:04:50,065 |-INFO in ch.qos.logback.core.sift.SiftProcessor@219e67ce - End of configuration.
   [testng] [2024-07-20 02:04:50,081] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG: 
   [testng] 02:04:50,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:04:50,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:50,082 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-20_02-04-50.log]
   [testng] 02:04:50,083 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a94f69a - End of configuration.
   [testng] [2024-07-20 02:04:50,102] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR: 
   [testng] 02:04:50,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:04:50,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:50,102 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-20_02-04-50.log]
   [testng] 02:04:50,103 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b6d87e0 - End of configuration.
   [testng] [2024-07-20 02:04:51,041] [pool-1-thread-9] Initializing /data/steve/SBIG/M82 H 100s Tr=10s: 
   [testng] [2024-07-20 02:04:51,377] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG: 
   [testng] [2024-07-20 02:04:51,398] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict: 
   [testng] [2024-07-20 02:04:51,419] [pool-1-thread-12] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS: 
   [testng] [2024-07-20 02:04:51,430] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry): 
   [testng] [2024-07-20 02:04:51,439] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr: 
   [testng] [2024-07-20 02:04:51,580] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif: 
   [testng] [2024-07-20 02:04:51,606] [pool-1-thread-1] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS: 
   [testng] [2024-07-20 02:04:51,814] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test: 
   [testng] [2024-07-20 02:04:51,842] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3: 
   [testng] [2024-07-20 02:04:51,855] [pool-1-thread-4] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif: 
   [testng] [2024-07-20 02:04:51,883] [pool-1-thread-11] Initializing /data/steve/TIFF/ta123 stack TIFF: 
   [testng] [2024-07-20 02:04:51,995] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm: 
   [testng] [2024-07-20 02:04:52,144] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict: 
   [testng] [2024-07-20 02:04:52,189] [pool-1-thread-8] Initializing /data/steve/UBM (Rosset)/SG2.PR3: 
   [testng] [2024-07-20 02:04:52,232] [pool-1-thread-1] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif: 
   [testng] [2024-07-20 02:04:52,288] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack: 
   [testng] [2024-07-20 02:04:52,356] [pool-1-thread-11] Initializing /data/steve/TIFF/Hough test TIFF: 
   [testng] [2024-07-20 02:04:52,438] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3: 
   [testng] [2024-07-20 02:04:52,453] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict: 
   [testng] [2024-07-20 02:04:52,475] [pool-1-thread-2] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk: 
   [testng] [2024-07-20 02:04:52,523] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2: 
   [testng] [2024-07-20 02:04:52,535] [pool-1-thread-4] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img: 
   [testng] [2024-07-20 02:04:52,554] [pool-1-thread-9] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd: 
   [testng] [2024-07-20 02:04:52,686] [pool-1-thread-12] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk: 
   [testng] [2024-07-20 02:04:52,748] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2: 
   [testng] [2024-07-20 02:04:52,821] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2: 
   [testng] [2024-07-20 02:04:52,849] [pool-1-thread-2] Initializing /data/steve/TIFF/HAFF SEM: 
   [testng] [2024-07-20 02:04:52,917] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3: 
   [testng] [2024-07-20 02:04:52,927] [pool-1-thread-1] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV: 
   [testng] [2024-07-20 02:04:52,987] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS: 
   [testng] [2024-07-20 02:04:53,002] [pool-1-thread-3] Initializing /data/steve/Targa/Test.TGA: 
   [testng] [2024-07-20 02:04:53,017] [pool-1-thread-9] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif: 
   [testng] [2024-07-20 02:04:53,058] [pool-1-thread-4] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts: 
   [testng] [2024-07-20 02:04:53,137] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP: 
   [testng] [2024-07-20 02:04:53,170] [pool-1-thread-8] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img: 
   [testng] [2024-07-20 02:04:53,209] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3: 
   [testng] [2024-07-20 02:04:53,271] [pool-1-thread-12] Initializing /data/steve/SBIG/M81 H 250s Tr=5s: 
   [testng] [2024-07-20 02:04:53,306] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY: 
   [testng] [2024-07-20 02:04:53,451] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A: 
   [testng] [2024-07-20 02:04:53,472] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG: 
   [testng] [2024-07-20 02:04:53,509] [pool-1-thread-1] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF: 
   [testng] [2024-07-20 02:04:53,552] [pool-1-thread-8] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top: 
   [testng] [2024-07-20 02:04:53,751] [pool-1-thread-11] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif: 
   [testng] [2024-07-20 02:04:53,806] [pool-1-thread-8] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts: 
   [testng] [2024-07-20 02:04:53,858] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm: 
   [testng] [2024-07-20 02:04:53,894] [pool-1-thread-4] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR: 
   [testng] [2024-07-20 02:04:53,909] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP: 
   [testng] [2024-07-20 02:04:53,944] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG: 
   [testng] [2024-07-20 02:04:53,966] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2: 
   [testng] [2024-07-20 02:04:54,044] [pool-1-thread-12] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img: 
   [testng] [2024-07-20 02:04:54,068] [pool-1-thread-6] Initializing /data/steve/FITS/M104.fits: 
   [testng] [2024-07-20 02:04:54,082] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS: 
   [testng] [2024-07-20 02:04:54,183] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm: 
   [testng] [2024-07-20 02:04:54,205] [pool-1-thread-7] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm: 
   [testng] [2024-07-20 02:04:54,217] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP: 
   [testng] [2024-07-20 02:04:54,268] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr: 
   [testng] [2024-07-20 02:04:54,309] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-32.IMG: 
   [testng] [2024-07-20 02:04:54,355] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS: 
   [testng] [2024-07-20 02:04:54,382] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL: 
   [testng] [2024-07-20 02:04:54,389] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4: 
   [testng] [2024-07-20 02:04:54,448] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG: 
   [testng] [2024-07-20 02:04:54,488] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm: 
   [testng] [2024-07-20 02:04:54,523] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif: 
   [testng] [2024-07-20 02:04:54,570] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm: 
   [testng] [2024-07-20 02:04:54,607] [pool-1-thread-4] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif: 
   [testng] [2024-07-20 02:04:54,678] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm: 
   [testng] [2024-07-20 02:04:54,706] [pool-1-thread-9] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts: 
   [testng] [2024-07-20 02:04:54,728] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP: 
   [testng] [2024-07-20 02:04:54,780] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP: 
   [testng] [2024-07-20 02:04:54,809] [pool-1-thread-10] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF: 
   [testng] [2024-07-20 02:04:54,916] [pool-1-thread-2] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top: 
   [testng] [2024-07-20 02:04:54,936] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm: 
   [testng] [2024-07-20 02:04:54,977] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee: 
   [testng] [2024-07-20 02:04:54,995] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3: 
   [testng] [2024-07-20 02:04:55,046] [pool-1-thread-9] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX: 
   [testng] [2024-07-20 02:04:55,131] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2: 
   [testng] [2024-07-20 02:04:55,208] [pool-1-thread-11] Initializing /data/steve/VG SAM (Karen)/BGND.DTI: 
   [testng] [2024-07-20 02:04:55,218] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG: 
   [testng] [2024-07-20 02:04:55,246] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF: 
   [testng] [2024-07-20 02:04:55,327] [pool-1-thread-5] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR: 
   [testng] [2024-07-20 02:04:55,338] [pool-1-thread-8] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF: 
   [testng] [2024-07-20 02:04:55,384] [pool-1-thread-10] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT: 
   [testng] [2024-07-20 02:04:55,535] [pool-1-thread-1] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG: 
   [testng] [2024-07-20 02:04:55,564] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2: 
   [testng] [2024-07-20 02:04:55,656] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE: 
   [testng] [2024-07-20 02:04:55,680] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm: 
   [testng] [2024-07-20 02:04:55,801] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2: 
   [testng] [2024-07-20 02:04:55,815] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2: 
   [testng] [2024-07-20 02:04:55,827] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2: 
   [testng] [2024-07-20 02:04:55,833] [pool-1-thread-8] Initializing /data/steve/SM-Camera/Orhan + IPES rig: 
   [testng] [2024-07-20 02:04:55,975] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5: 
   [testng] [2024-07-20 02:04:55,985] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF: 
   [testng] [2024-07-20 02:04:56,011] [pool-1-thread-12] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM: 
   [testng] [2024-07-20 02:04:56,056] [pool-1-thread-3] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI: 
   [testng] [2024-07-20 02:04:56,084] [pool-1-thread-2] Initializing /data/steve/Philips (Markus G)/302.IMG: 
   [testng] [2024-07-20 02:04:56,116] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR: 
   [testng] [2024-07-20 02:04:56,145] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm: 
   [testng] [2024-07-20 02:04:56,258] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2: 
   [testng] [2024-07-20 02:04:56,279] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR: 
   [testng] [2024-07-20 02:04:56,318] [pool-1-thread-3] Initializing /data/steve/TIFF/CD-ROM TIFF: 
   [testng] [2024-07-20 02:04:56,410] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP: 
   [testng] [2024-07-20 02:04:56,430] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3: 
   [testng] [2024-07-20 02:04:56,477] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG: 
   [testng] [2024-07-20 02:04:56,533] [pool-1-thread-6] Initializing /data/steve/FITS/M51.fits: 
   [testng] [2024-07-20 02:04:56,561] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict: 
   [testng] [2024-07-20 02:04:56,583] [pool-1-thread-7] Initializing /data/steve/Burleigh/Burleigh v2/Graphite: 
   [testng] [2024-07-20 02:04:56,631] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2: 
   [testng] [2024-07-20 02:04:56,654] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2: 
   [testng] [2024-07-20 02:04:56,684] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF: 
   [testng] [2024-07-20 02:04:56,738] [pool-1-thread-8] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk: 
   [testng] [2024-07-20 02:04:56,770] [pool-1-thread-9] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd: 
   [testng] [2024-07-20 02:04:56,802] [pool-1-thread-6] Initializing /data/steve/TIFF/CONCRETE TIFF: 
   [testng] [2024-07-20 02:04:56,853] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG: 
   [testng] [2024-07-20 02:04:56,899] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp: 
   [testng] [2024-07-20 02:04:56,921] [pool-1-thread-1] Initializing /data/steve/TIFF/8MAR03A.TIFF: 
   [testng] [2024-07-20 02:04:56,964] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS: 
   [testng] [2024-07-20 02:04:57,009] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif: 
   [testng] [2024-07-20 02:04:57,107] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR: 
   [testng] [2024-07-20 02:04:57,139] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP: 
   [testng] [2024-07-20 02:04:57,172] [pool-1-thread-9] Initializing /data/steve/TIFF/Little owl TIFF: 
   [testng] [2024-07-20 02:04:57,268] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif: 
   [testng] [2024-07-20 02:04:57,330] [pool-1-thread-8] Initializing /data/steve/Philips (Markus G)/135-33.IMG: 
   [testng] [2024-07-20 02:04:57,346] [pool-1-thread-12] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC: 
   [testng] [2024-07-20 02:04:57,393] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG: 
   [testng] [2024-07-20 02:04:57,461] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif: 
   [testng] [2024-07-20 02:04:57,522] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF: 
   [testng] [2024-07-20 02:04:57,567] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm: 
   [testng] [2024-07-20 02:04:57,587] [pool-1-thread-2] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd: 
   [testng] [2024-07-20 02:04:57,598] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf: 
   [testng] [2024-07-20 02:04:57,621] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG: 
   [testng] [2024-07-20 02:04:57,781] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt): 
   [testng] [2024-07-20 02:04:57,829] [pool-1-thread-9] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP: 
   [testng] [2024-07-20 02:04:57,894] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi: 
   [testng] [2024-07-20 02:04:57,928] [pool-1-thread-6] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif: 
   [testng] [2024-07-20 02:04:58,000] [pool-1-thread-1] Initializing /data/steve/Philips (Markus G)/302.TIF: 
   [testng] [2024-07-20 02:04:58,033] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF: 
   [testng] [2024-07-20 02:04:58,093] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm: 
   [testng] [2024-07-20 02:04:58,105] [pool-1-thread-5] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC: 
   [testng] [2024-07-20 02:04:58,144] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT: 
   [testng] [2024-07-20 02:04:58,310] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles: 
   [testng] [2024-07-20 02:04:58,392] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test: 
   [testng] [2024-07-20 02:04:58,422] [pool-1-thread-7] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm: 
   [testng] [2024-07-20 02:04:58,458] [pool-1-thread-11] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG: 
   [testng] [2024-07-20 02:04:58,499] [pool-1-thread-10] Initializing /data/steve/FITS/M13.fits: 
   [testng] [2024-07-20 02:04:58,516] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF: 
   [testng] [2024-07-20 02:04:58,605] [pool-1-thread-5] Initializing /data/steve/Philips (Markus G)/135-31.IMG: 
   [testng] [2024-07-20 02:04:58,648] [pool-1-thread-2] Initializing /data/steve/SBIG/M81 M 40s: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 8480, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 30 seconds
Finished: SUCCESS