Started by upstream project "BIOFORMATS-test-repo" build number 129
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins8701570582596502113.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_20226_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 14:14:37,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 14:14:37,608 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 14:14:37,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 14:14:37,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 14:14:37,679 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 14:14:37,680 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 14:14:37,680 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 14:14:37,681 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 14:14:37,681 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 14:14:37,683 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 14:14:37,683 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 461 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-22 14:14:37,706] [main] java.version = 1.8.0_342
[testng] 14:14:37,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 14:14:37,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:37,802 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-22_14-14-37.log]
[testng] 14:14:37,805 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-22 14:14:37,807] [main] testng.directory = /data
[testng] [2024-07-22 14:14:37,808] [main] testng.configDirectory = /config
[testng] [2024-07-22 14:14:37,827] [main] testng.multiplier = 1.0
[testng] [2024-07-22 14:14:37,827] [main] testng.in-memory = false
[testng] [2024-07-22 14:14:37,828] [main] testng.allow-missing = false
[testng] [2024-07-22 14:14:37,828] [main] user.language = fr
[testng] [2024-07-22 14:14:37,828] [main] user.country = FR
[testng] [2024-07-22 14:14:37,828] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-22 14:14:38,681] [main] ----------------------------------------
[testng] [2024-07-22 14:14:38,681] [main] Total files: 16
[testng] [2024-07-22 14:14:38,681] [main] Scan time: 0.853 s (53 ms/file)
[testng] [2024-07-22 14:14:38,682] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 15 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-22 14:14:49,026] [pool-1-thread-1] Initializing /data/samples/5400.afi:
[testng] 14:14:49,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 14:14:49,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:49,029 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-22_14-14-49.log]
[testng] 14:14:49,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ab1e93b - End of configuration.
[testng] [2024-07-22 14:14:49,151] [pool-1-thread-12] Initializing /data/samples/5351.afi:
[testng] 14:14:49,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 14:14:49,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:49,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-22_14-14-49.log]
[testng] 14:14:49,153 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4536e45 - End of configuration.
[testng] [2024-07-22 14:14:49,358] [pool-1-thread-11] Initializing /data/samples/5306.afi:
[testng] 14:14:49,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 14:14:49,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:49,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-22_14-14-49.log]
[testng] 14:14:49,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@106dbca1 - End of configuration.
[testng] [2024-07-22 14:14:49,481] [pool-1-thread-10] Initializing /data/samples/5383.afi:
[testng] 14:14:49,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 14:14:49,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:49,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-22_14-14-49.log]
[testng] 14:14:49,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a2dbf6d - End of configuration.
[testng] [2024-07-22 14:14:49,543] [pool-1-thread-9] Initializing /data/samples/5365.afi:
[testng] 14:14:49,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 14:14:49,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:49,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-22_14-14-49.log]
[testng] 14:14:49,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bebba56 - End of configuration.
[testng] [2024-07-22 14:14:49,623] [pool-1-thread-8] Initializing /data/samples/5440.afi:
[testng] 14:14:49,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 14:14:49,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:49,625 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-22_14-14-49.log]
[testng] 14:14:49,626 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1260af2a - End of configuration.
[testng] [2024-07-22 14:14:49,941] [pool-1-thread-7] Initializing /data/samples/5446.afi:
[testng] 14:14:49,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 14:14:49,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:49,943 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-22_14-14-49.log]
[testng] 14:14:49,944 |-INFO in ch.qos.logback.core.sift.SiftProcessor@724e328b - End of configuration.
[testng] [2024-07-22 14:14:50,012] [pool-1-thread-6] Initializing /data/samples/5339.afi:
[testng] 14:14:50,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 14:14:50,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:50,014 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-22_14-14-50.log]
[testng] 14:14:50,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@607caa95 - End of configuration.
[testng] [2024-07-22 14:14:50,090] [pool-1-thread-5] Initializing /data/samples/5387.afi:
[testng] 14:14:50,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 14:14:50,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:50,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-22_14-14-50.log]
[testng] 14:14:50,109 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16e199f3 - End of configuration.
[testng] [2024-07-22 14:14:50,214] [pool-1-thread-4] Initializing /data/samples/5407.afi:
[testng] 14:14:50,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 14:14:50,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:50,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-22_14-14-50.log]
[testng] 14:14:50,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55b7c7d - End of configuration.
[testng] [2024-07-22 14:14:50,276] [pool-1-thread-3] Initializing /data/samples/5347.afi:
[testng] 14:14:50,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 14:14:50,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:50,277 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-22_14-14-50.log]
[testng] 14:14:50,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@528d6bb3 - End of configuration.
[testng] [2024-07-22 14:14:50,353] [pool-1-thread-2] Initializing /data/samples/5358.afi:
[testng] 14:14:50,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 14:14:50,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:14:50,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-22_14-14-50.log]
[testng] 14:14:50,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ca0d398 - End of configuration.
[testng] [2024-07-22 14:15:44,094] [pool-1-thread-1] Initializing /data/samples/5414.afi:
[testng] [2024-07-22 14:15:46,936] [pool-1-thread-3] Initializing /data/samples/5343.afi:
[testng] [2024-07-22 14:15:47,236] [pool-1-thread-8] Initializing /data/samples/5371.afi:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 795, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 59 seconds
Finished: SUCCESS