Started by upstream project "BIOFORMATS-test-repo" build number 130
originally caused by:
Started by upstream project "Trigger" build number 147
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins7103632429615162527.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_20320_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 11:13:39,638 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 11:13:39,640 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 11:13:39,640 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 11:13:39,641 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 11:13:39,641 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 11:13:39,642 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 11:13:39,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 11:13:39,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 11:13:39,643 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 11:13:39,644 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 11:13:39,644 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 11:13:39,644 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 11:13:39,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 11:13:39,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 11:13:39,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 11:13:39,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 11:13:39,875 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 11:13:39,876 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 11:13:39,876 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 11:13:39,877 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 11:13:39,877 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 11:13:39,878 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 11:13:39,878 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 235 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-23 11:13:39,887] [main] java.version = 11.0.16
[testng] 11:13:39,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 11:13:39,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:13:39,937 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-23_11-13-39.log]
[testng] 11:13:39,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-07-23 11:13:39,941] [main] testng.directory = /data
[testng] [2024-07-23 11:13:39,941] [main] testng.configDirectory = /config
[testng] [2024-07-23 11:13:39,952] [main] testng.multiplier = 1.0
[testng] [2024-07-23 11:13:39,953] [main] testng.in-memory = false
[testng] [2024-07-23 11:13:39,953] [main] testng.allow-missing = false
[testng] [2024-07-23 11:13:39,953] [main] user.language = en
[testng] [2024-07-23 11:13:39,953] [main] user.country = ${user.country}
[testng] [2024-07-23 11:13:39,953] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-23 11:13:53,926] [main] ----------------------------------------
[testng] [2024-07-23 11:13:53,926] [main] Total files: 283
[testng] [2024-07-23 11:13:53,926] [main] Scan time: 13.971 s (49 ms/file)
[testng] [2024-07-23 11:13:53,926] [main] ----------------------------------------
[testng] [2024-07-23 11:19:31,234] [main] setId("/data/olympus/Stitched_XYZ.vsi") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:19:34,055] [main] setId("/data/olympus/XYZt.vsi") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:19:34,071] [main] setId("/data/olympus/_Stitched_XYZ_/stack1/frame_t_0.ets") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:19:34,100] [main] setId("/data/olympus/_XYZt_/stack1/frame_t_0.ets") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:19:34,188] [main] setId("/data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:19:34,241] [main] setId("/data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:19:35,662] [main] setId("/data/olympus/calcium sparks_XYt.vsi") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:19:45,049] [main] setId("/data/olympus/stitched 4x4 zstack 10X_XYZ.vsi") failed
[testng] loci.formats.FormatException: Unknown magic bytes: II*
[testng] at loci.formats.in.CellSensReader.parseETSFile(CellSensReader.java:1221)
[testng] at loci.formats.in.CellSensReader.initFile(CellSensReader.java:783)
[testng] at loci.formats.FormatReader.setId(FormatReader.java:1480)
[testng] at loci.formats.ImageReader.setId(ImageReader.java:864)
[testng] at loci.tests.testng.FormatReaderTestFactory.createInstances(FormatReaderTestFactory.java:251)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[testng] at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[testng] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[testng] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[testng] at org.testng.internal.FactoryMethod.invoke(FactoryMethod.java:81)
[testng] at org.testng.internal.TestNGClassFinder.<init>(TestNGClassFinder.java:140)
[testng] at org.testng.TestRunner.initMethods(TestRunner.java:409)
[testng] at org.testng.TestRunner.init(TestRunner.java:235)
[testng] at org.testng.TestRunner.init(TestRunner.java:205)
[testng] at org.testng.TestRunner.<init>(TestRunner.java:153)
[testng] at org.testng.SuiteRunner$DefaultTestRunnerFactory.newTestRunner(SuiteRunner.java:522)
[testng] at org.testng.SuiteRunner.init(SuiteRunner.java:157)
[testng] at org.testng.SuiteRunner.<init>(SuiteRunner.java:111)
[testng] at org.testng.TestNG.createSuiteRunner(TestNG.java:1273)
[testng] at org.testng.TestNG.createSuiteRunners(TestNG.java:1260)
[testng] at org.testng.TestNG.runSuitesLocally(TestNG.java:1114)
[testng] at org.testng.TestNG.run(TestNG.java:1031)
[testng] at org.testng.TestNG.privateMain(TestNG.java:1338)
[testng] at org.testng.TestNG.main(TestNG.java:1307)
[testng] [2024-07-23 11:21:36,836] [main] setId failed on [/data/olympus/Stitched_XYZ.vsi, /data/olympus/XYZt.vsi, /data/olympus/_Stitched_XYZ_/stack1/frame_t_0.ets, /data/olympus/_XYZt_/stack1/frame_t_0.ets, /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets, /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets, /data/olympus/calcium sparks_XYt.vsi, /data/olympus/stitched 4x4 zstack 10X_XYZ.vsi]
[testng] [TestNG] [Error]
[testng] The factory method class loci.tests.testng.FormatReaderTestFactory.createInstances() threw an exception
[testng] The tests failed.
BUILD FAILED
/bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest
Total time: 8 minutes 0 seconds
Build step 'Execute shell' marked build as failure
Finished: FAILURE