Started by upstream project "BIOFORMATS-test-repo" build number 131 originally caused by: Started by upstream project "Trigger" build number 148 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins10678719839890473058.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_20485_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:20:48,518 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:48,520 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:20:48,520 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:48,521 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:48,521 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:48,522 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:48,522 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:48,522 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:48,523 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:48,523 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:48,524 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:48,524 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:48,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:48,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:48,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:48,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:48,745 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:48,745 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:48,746 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:48,746 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:48,746 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:20:48,747 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:20:48,747 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 224 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-24 01:20:48,757] [main] java.version = 17.0.2 [testng] 01:20:48,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:48,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:48,807 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-24_01-20-48.log] [testng] 01:20:48,809 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-07-24 01:20:48,812] [main] testng.directory = /data [testng] [2024-07-24 01:20:48,812] [main] testng.configDirectory = /config [testng] [2024-07-24 01:20:48,822] [main] testng.multiplier = 1.0 [testng] [2024-07-24 01:20:48,823] [main] testng.in-memory = false [testng] [2024-07-24 01:20:48,823] [main] testng.allow-missing = false [testng] [2024-07-24 01:20:48,823] [main] user.language = en [testng] [2024-07-24 01:20:48,823] [main] user.country = ${user.country} [testng] [2024-07-24 01:20:48,823] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-24 01:20:55,736] [main] ---------------------------------------- [testng] [2024-07-24 01:20:55,737] [main] Total files: 4426 [testng] [2024-07-24 01:20:55,737] [main] Scan time: 6.913 s (1 ms/file) [testng] [2024-07-24 01:20:55,737] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-24 01:22:50,568] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] 01:22:50,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:22:50,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-24_01-22-50.log] [testng] 01:22:50,571 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1100ba07 - End of configuration. [testng] [2024-07-24 01:22:50,649] [pool-1-thread-12] Initializing /data/public/libtiff/jim___cg.tif: [testng] 01:22:50,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:22:50,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,650 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-24_01-22-50.log] [testng] 01:22:50,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2028a983 - End of configuration. [testng] [2024-07-24 01:22:50,673] [pool-1-thread-11] Initializing /data/chris-wood/15ms full low light.tif: [testng] 01:22:50,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:22:50,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,674 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-24_01-22-50.log] [testng] 01:22:50,675 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3512dae3 - End of configuration. [testng] [2024-07-24 01:22:50,743] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z006.tif: [testng] 01:22:50,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:50,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-24_01-22-50.log] [testng] 01:22:50,744 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fe126e6 - End of configuration. [testng] [2024-07-24 01:22:50,775] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] 01:22:50,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:50,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,776 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-24_01-22-50.log] [testng] 01:22:50,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39c3abd5 - End of configuration. [testng] [2024-07-24 01:22:50,817] [pool-1-thread-8] Initializing /data/damian/18m.tiff: [testng] 01:22:50,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:50,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-24_01-22-50.log] [testng] 01:22:50,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e543e03 - End of configuration. [testng] [2024-07-24 01:22:50,860] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] 01:22:50,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:50,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,861 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-24_01-22-50.log] [testng] 01:22:50,861 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ea55e7 - End of configuration. [testng] [2024-07-24 01:22:50,894] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x16.tiff: [testng] 01:22:50,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:50,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-24_01-22-50.log] [testng] 01:22:50,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424a807d - End of configuration. [testng] [2024-07-24 01:22:50,925] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] 01:22:50,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:50,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,926 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-24_01-22-50.log] [testng] 01:22:50,927 |-INFO in ch.qos.logback.core.sift.SiftProcessor@200b0321 - End of configuration. [testng] [2024-07-24 01:22:50,957] [pool-1-thread-4] Initializing /data/ascb/CYT-92_PasolliMouse1b_4800.tif: [testng] 01:22:50,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:50,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-24_01-22-50.log] [testng] 01:22:50,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a0a06f7 - End of configuration. [testng] [2024-07-24 01:22:51,017] [pool-1-thread-3] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] 01:22:51,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:51,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:51,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-24_01-22-51.log] [testng] 01:22:51,019 |-INFO in ch.qos.logback.core.sift.SiftProcessor@543d6ad1 - End of configuration. [testng] [2024-07-24 01:22:51,051] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] 01:22:51,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:51,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:51,052 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-24_01-22-51.log] [testng] 01:22:51,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7512212f - End of configuration. [testng] [2024-07-24 01:22:53,147] [pool-1-thread-1] Initializing /data/misc/mri-stack.tif: [testng] [2024-07-24 01:22:53,188] [pool-1-thread-6] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-07-24 01:22:53,217] [pool-1-thread-2] Initializing /data/sarah/FITC left 100% 1x mag00000.tif: [testng] [2024-07-24 01:22:53,247] [pool-1-thread-12] Initializing /data/josiah/cell-Z39.C0.tiff: [testng] [2024-07-24 01:22:53,271] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-07-24 01:22:53,303] [pool-1-thread-8] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-07-24 01:22:53,331] [pool-1-thread-5] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-07-24 01:22:53,369] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-07-24 01:22:53,417] [pool-1-thread-9] Initializing /data/josiah/cell-Z32.C1.tiff: [testng] [2024-07-24 01:22:53,452] [pool-1-thread-10] Initializing /data/damian/00m.tiff: [testng] [2024-07-24 01:22:54,110] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-07-24 01:22:54,341] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-07-24 01:22:54,414] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-07-24 01:22:54,508] [pool-1-thread-6] Initializing /data/public/condensation/A6.pattern2.tif: [testng] [2024-07-24 01:22:54,576] [pool-1-thread-2] Initializing /data/marc/ball48_LOCI_RGB_autoscale_10x.tif: [testng] [2024-07-24 01:22:54,638] [pool-1-thread-12] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-07-24 01:22:54,705] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-07-24 01:22:54,769] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] [2024-07-24 01:22:54,817] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-07-24 01:22:54,983] [pool-1-thread-11] Initializing /data/josiah/cell-Z18.C1.tiff: [testng] [2024-07-24 01:22:55,023] [pool-1-thread-8] Initializing /data/josiah/cell-Z0.C1.tiff: [testng] [2024-07-24 01:22:55,168] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-07-24 01:22:55,208] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-07-24 01:22:55,270] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-07-24 01:22:55,291] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-07-24 01:22:55,504] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-07-24 01:22:55,700] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-07-24 01:22:55,788] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-07-24 01:22:55,836] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-24 01:22:55,891] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-07-24 01:22:56,006] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] [2024-07-24 01:22:56,059] [pool-1-thread-10] Initializing /data/misc/mri-old.mov: [testng] [2024-07-24 01:22:56,072] [pool-1-thread-9] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] [2024-07-24 01:22:56,436] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-07-24 01:22:56,496] [pool-1-thread-3] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-07-24 01:22:56,542] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-07-24 01:22:56,565] [pool-1-thread-8] Initializing /data/julien/CRBMquadtour.tif: [testng] [2024-07-24 01:23:02,287] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] [2024-07-24 01:23:02,310] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-07-24 01:23:02,358] [pool-1-thread-10] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-07-24 01:23:03,019] [pool-1-thread-12] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-07-24 01:23:03,057] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z002.tif: [testng] [2024-07-24 01:23:03,123] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-07-24 01:23:03,183] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-07-24 01:23:03,218] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-07-24 01:23:03,279] [pool-1-thread-3] 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Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-07-24 01:23:14,331] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z014.tif: [testng] [2024-07-24 01:23:14,382] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-07-24 01:23:14,420] [pool-1-thread-11] Initializing /data/damian/06m.tiff: [testng] [2024-07-24 01:23:14,445] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-24 01:23:14,493] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-07-24 01:23:14,753] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z020.tif: [testng] [2024-07-24 01:23:14,835] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-07-24 01:23:14,987] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z017.tif: [testng] [2024-07-24 01:23:15,130] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern5.tif: 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Initializing /data/tom-kazimiers/test_exiftool2_resave.tiff: [testng] [2024-07-24 01:23:19,811] [pool-1-thread-6] Initializing /data/brian/CurrentSystems.tiff: [testng] [2024-07-24 01:23:19,989] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-07-24 01:23:20,070] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z020.tif: [testng] [2024-07-24 01:23:20,131] [pool-1-thread-9] Initializing /data/sub-resolution/Leica-2/Leica-2-subifds.tiff: [testng] [2024-07-24 01:23:20,327] [pool-1-thread-12] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-07-24 01:23:20,549] [pool-1-thread-5] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-07-24 01:23:20,639] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z033.tif: [testng] [2024-07-24 01:23:21,038] [pool-1-thread-11] Initializing /data/public/condensation/A1.pattern2.tif: [testng] [2024-07-24 01:23:21,161] [pool-1-thread-3] 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Initializing /data/big-images/4kx4k.tif: [testng] [2024-07-24 01:24:37,710] [pool-1-thread-8] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-07-24 01:24:40,117] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z049.tif: [testng] [2024-07-24 01:24:40,184] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x64.tiff: [testng] [2024-07-24 01:24:40,314] [pool-1-thread-11] Initializing /data/ascb/CYT-50_FriendSecretoryPairA_4800.tif: [testng] [2024-07-24 01:24:40,517] [pool-1-thread-4] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-07-24 01:24:40,542] [pool-1-thread-10] Initializing /data/big-images/8kx8k.tif: [testng] [2024-07-24 01:24:40,873] [pool-1-thread-12] Initializing /data/wayne/MyoblastCells-8bit.tiff: [testng] [2024-07-24 01:24:40,902] [pool-1-thread-3] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-07-24 01:24:41,055] [pool-1-thread-1] Initializing /data/christine/Image5D_4color test stack/test stack.tif: [testng] [2024-07-24 01:24:41,115] [pool-1-thread-4] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-07-24 01:24:41,240] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-07-24 01:24:41,787] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0211.TIF: [testng] [2024-07-24 01:24:42,002] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0256.TIF: [testng] [2024-07-24 01:24:42,347] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern2.tif: [testng] [2024-07-24 01:24:42,464] [pool-1-thread-1] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-07-24 01:24:42,532] [pool-1-thread-4] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-07-24 01:24:43,104] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-07-24 01:24:43,173] [pool-1-thread-3] Initializing 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/data/ascb/CYT-35_FriendOsmiumEpididymis_4800.tif: [testng] [2024-07-24 01:24:54,668] [pool-1-thread-11] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-07-24 01:24:55,280] [pool-1-thread-9] Initializing /data/edward/TestDoc2.tif: [testng] [2024-07-24 01:24:55,309] [pool-1-thread-11] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-07-24 01:24:56,726] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z040.tif: [testng] [2024-07-24 01:24:56,996] [pool-1-thread-10] Initializing /data/curtis/map/jumps-over: [testng] [2024-07-24 01:24:57,186] [pool-1-thread-10] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-24 01:24:57,844] [pool-1-thread-2] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-07-24 01:24:58,610] [pool-1-thread-11] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-07-24 01:24:59,424] [pool-1-thread-11] Initializing /data/josiah/cell-Z16.C0.tiff: [testng] 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[2024-07-24 01:25:02,058] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x48.tiff: [testng] [2024-07-24 01:25:02,268] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-07-24 01:25:02,298] [pool-1-thread-1] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-07-24 01:25:02,527] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-07-24 01:25:02,932] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-07-24 01:25:03,166] [pool-1-thread-12] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-07-24 01:25:03,702] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-07-24 01:25:04,057] [pool-1-thread-12] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-07-24 01:25:04,398] [pool-1-thread-4] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-07-24 01:25:04,902] [pool-1-thread-4] Initializing /data/qa-20514/819_2.tif: [testng] [2024-07-24 01:25:05,772] [pool-1-thread-4] Initializing /data/public/libtiff/oxford.tif: [testng] [2024-07-24 01:25:06,031] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z012.tif: [testng] [2024-07-24 01:25:06,239] [pool-1-thread-7] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-07-24 01:25:06,308] [pool-1-thread-4] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-07-24 01:25:06,894] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-07-24 01:25:06,968] [pool-1-thread-2] Initializing /data/martin/head.tif: [testng] [2024-07-24 01:25:07,029] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-07-24 01:25:07,335] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-07-24 01:25:07,372] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-07-24 01:25:07,572] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-07-24 01:25:07,703] [pool-1-thread-7] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-07-24 01:25:07,929] [pool-1-thread-2] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-07-24 01:25:08,403] [pool-1-thread-5] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-07-24 01:25:08,616] [pool-1-thread-7] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-07-24 01:25:08,663] [pool-1-thread-12] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-07-24 01:25:08,920] [pool-1-thread-5] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-07-24 01:25:08,988] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-07-24 01:25:09,046] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-07-24 01:25:09,146] [pool-1-thread-7] Initializing /data/ascb/CYT-2_BaintonBoylesPhagocytosisYeastB_4800.tif: [testng] [2024-07-24 01:25:09,412] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-07-24 01:25:09,500] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-07-24 01:25:09,658] [pool-1-thread-5] Initializing /data/jae/first image.tif: [testng] [2024-07-24 01:25:09,945] [pool-1-thread-10] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-24 01:25:09,977] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-07-24 01:25:10,162] [pool-1-thread-5] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-07-24 01:25:12,961] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-07-24 01:25:13,089] [pool-1-thread-3] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-07-24 01:25:13,248] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] [2024-07-24 01:25:13,280] [pool-1-thread-12] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-07-24 01:25:13,520] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z044.tif: [testng] [2024-07-24 01:25:13,593] [pool-1-thread-10] Initializing /data/marc/ball48_original_10x.tif: [testng] [2024-07-24 01:25:13,637] [pool-1-thread-9] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-07-24 01:25:13,723] [pool-1-thread-12] Initializing /data/damian/15m.tiff: [testng] [2024-07-24 01:25:13,800] [pool-1-thread-3] Initializing /data/ascb/bad/FND-21_FawcettPhillipsTransverse_4800.tif: [testng] [2024-07-24 01:25:14,072] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-07-24 01:25:14,130] [pool-1-thread-12] Initializing /data/josiah/cell-Z35.C1.tiff: [testng] [2024-07-24 01:25:14,344] [pool-1-thread-2] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] [2024-07-24 01:25:14,513] [pool-1-thread-12] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-07-24 01:25:14,621] [pool-1-thread-4] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-07-24 01:25:14,963] [pool-1-thread-12] Initializing /data/public/libtiff/strike.tif: [testng] [2024-07-24 01:25:15,274] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-07-24 01:25:15,308] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-07-24 01:25:15,534] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-07-24 01:25:15,548] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] [2024-07-24 01:25:15,677] [pool-1-thread-8] Initializing /data/stephane/d02&007.tif: [testng] [2024-07-24 01:25:15,788] [pool-1-thread-12] Initializing /data/jae/Rat_Hippocampal_Neuron.tif: [testng] [2024-07-24 01:25:15,970] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z012.tif: [testng] [2024-07-24 01:25:15,999] [pool-1-thread-4] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-07-24 01:25:16,388] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-07-24 01:25:16,432] [pool-1-thread-12] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-07-24 01:25:17,693] [pool-1-thread-10] Initializing /data/misc/before 1_C2_TP1.tiff: [testng] [2024-07-24 01:25:17,806] [pool-1-thread-7] Initializing /data/victoria/scan4_1hr_20X_.352g_n180p_2z_0.387644res_9int_C2_TP1.tiff: [testng] [2024-07-24 01:25:18,004] [pool-1-thread-4] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-07-24 01:25:18,103] [pool-1-thread-8] Initializing /data/julien/AVECCHRO.TIF: [testng] [2024-07-24 01:25:18,356] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-07-24 01:25:18,507] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-07-24 01:25:18,629] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z028.tif: [testng] [2024-07-24 01:25:18,656] [pool-1-thread-8] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-07-24 01:25:18,731] [pool-1-thread-10] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-07-24 01:25:19,221] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x64.tiff: [testng] [2024-07-24 01:25:19,259] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z011.tif: [testng] [2024-07-24 01:25:19,453] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips_fourteen.tiff: [testng] [2024-07-24 01:25:19,481] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-07-24 01:25:19,663] [pool-1-thread-8] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-07-24 01:25:19,803] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-07-24 01:25:19,866] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-07-24 01:25:20,282] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-07-24 01:25:20,316] [pool-1-thread-7] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-07-24 01:25:20,858] [pool-1-thread-10] Initializing /data/lzw/bigtest5.tif: [testng] [2024-07-24 01:25:20,919] [pool-1-thread-4] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-07-24 01:25:21,408] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z051.tif: [testng] [2024-07-24 01:25:21,449] [pool-1-thread-2] Initializing /data/curtis/images24.tiff: [testng] [2024-07-24 01:25:21,498] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-07-24 01:25:21,534] [pool-1-thread-11] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-07-24 01:25:24,438] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-07-24 01:25:24,667] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-07-24 01:25:24,799] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-07-24 01:25:25,056] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x48.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 11 seconds Finished: SUCCESS