Started by upstream project "BIOFORMATS-test-repo" build number 131
originally caused by:
Started by upstream project "Trigger" build number 148
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins15832944516150546637.sh
+ '[' cellsens = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_20594_merge_ci -v /uod/idr/repos/curated/cellsens:/data -v /uod/idr-scratch/merge-ci/curated/cellsens:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 02:13:07,231 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:13:07,232 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 02:13:07,232 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:13:07,233 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:13:07,233 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:13:07,233 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:13:07,234 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:13:07,234 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:13:07,234 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:13:07,235 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:13:07,235 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:13:07,235 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:13:07,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:13:07,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:13:07,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:13:07,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:13:07,428 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:13:07,428 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:13:07,428 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:13:07,428 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:13:07,429 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 02:13:07,429 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 02:13:07,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-24 02:13:07,438] [main] java.version = 17.0.2
[testng] 02:13:07,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:13:07,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:13:07,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-24_02-13-07.log]
[testng] 02:13:07,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-07-24 02:13:07,485] [main] testng.directory = /data
[testng] [2024-07-24 02:13:07,486] [main] testng.configDirectory = /config
[testng] [2024-07-24 02:13:07,494] [main] testng.multiplier = 1.0
[testng] [2024-07-24 02:13:07,495] [main] testng.in-memory = false
[testng] [2024-07-24 02:13:07,496] [main] testng.allow-missing = false
[testng] [2024-07-24 02:13:07,496] [main] user.language = en
[testng] [2024-07-24 02:13:07,496] [main] user.country = ${user.country}
[testng] [2024-07-24 02:13:07,496] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-24 02:15:07,585] [main] ----------------------------------------
[testng] [2024-07-24 02:15:07,585] [main] Total files: 134
[testng] [2024-07-24 02:15:07,586] [main] Scan time: 120.089 s (896 ms/file)
[testng] [2024-07-24 02:15:07,586] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 72 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-24 02:15:19,767] [pool-1-thread-1] Initializing /data/melissa/artificial-vsi/Image_V4.1_BF.vsi:
[testng] 02:15:19,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:15:19,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:19,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-24_02-15-19.log]
[testng] 02:15:19,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@602ecb0b - End of configuration.
[testng] [2024-07-24 02:15:19,832] [pool-1-thread-12] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack corr..vsi:
[testng] 02:15:19,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:15:19,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:19,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-24_02-15-19.log]
[testng] 02:15:19,833 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cece3b4 - End of configuration.
[testng] [2024-07-24 02:15:19,949] [pool-1-thread-11] Initializing /data/olivier/26-10-2014/Image_06.vsi:
[testng] 02:15:19,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:15:19,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:19,950 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-24_02-15-19.log]
[testng] 02:15:19,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b48e283 - End of configuration.
[testng] [2024-07-24 02:15:20,011] [pool-1-thread-10] Initializing /data/samples/Measurement & ROI/Bandy Snake.tif:
[testng] 02:15:20,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:15:20,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-24_02-15-20.log]
[testng] 02:15:20,012 |-INFO in ch.qos.logback.core.sift.SiftProcessor@622f9d10 - End of configuration.
[testng] [2024-07-24 02:15:20,078] [pool-1-thread-9] Initializing /data/brian/BZ cfos1-2_05.vsi:
[testng] 02:15:20,078 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:15:20,078 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,079 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-24_02-15-20.log]
[testng] 02:15:20,079 |-INFO in ch.qos.logback.core.sift.SiftProcessor@605226a0 - End of configuration.
[testng] [2024-07-24 02:15:20,105] [pool-1-thread-8] Initializing /data/samples/Measurement & ROI/Intensity t series.vsi:
[testng] 02:15:20,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:15:20,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,106 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-24_02-15-20.log]
[testng] 02:15:20,107 |-INFO in ch.qos.logback.core.sift.SiftProcessor@214d6121 - End of configuration.
[testng] [2024-07-24 02:15:20,134] [pool-1-thread-7] Initializing /data/qa-18870/Image_T30.vsi:
[testng] 02:15:20,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:15:20,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,135 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-24_02-15-20.log]
[testng] 02:15:20,136 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ca5ae24 - End of configuration.
[testng] [2024-07-24 02:15:20,181] [pool-1-thread-6] Initializing /data/gh-3822/_image_/stack1/frame_t_0.ets:
[testng] 02:15:20,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:15:20,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,182 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-24_02-15-20.log]
[testng] 02:15:20,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4318f027 - End of configuration.
[testng] [2024-07-24 02:15:20,214] [pool-1-thread-5] Initializing /data/melissa/SW10082402-02_21 - cy2 - cy5 copy.vsi:
[testng] 02:15:20,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:15:20,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-24_02-15-20.log]
[testng] 02:15:20,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69de133 - End of configuration.
[testng] [2024-07-24 02:15:20,250] [pool-1-thread-4] Initializing /data/samples/Measurement & ROI/Brown snake.tif:
[testng] 02:15:20,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:15:20,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,251 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-24_02-15-20.log]
[testng] 02:15:20,251 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56ffbe84 - End of configuration.
[testng] [2024-07-24 02:15:20,356] [pool-1-thread-3] Initializing /data/alex/pN1_new.vsi:
[testng] 02:15:20,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:15:20,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-24_02-15-20.log]
[testng] 02:15:20,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d755674 - End of configuration.
[testng] [2024-07-24 02:15:20,394] [pool-1-thread-2] Initializing /data/public/evident/Image_V4.1_FL_2D.vsi:
[testng] 02:15:20,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:15:20,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:15:20,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-24_02-15-20.log]
[testng] 02:15:20,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@308bb05e - End of configuration.
[testng] [2024-07-24 02:15:22,919] [pool-1-thread-4] Initializing /data/samples/Shading Correction/Micrometer Original.tif:
[testng] [2024-07-24 02:15:23,020] [pool-1-thread-8] Initializing /data/melissa/SW10082402-02_21 - 1 - GOLD copy.vsi:
[testng] [2024-07-24 02:15:23,044] [pool-1-thread-10] Initializing /data/samples/Deconvolution/Gut section raw.vsi:
[testng] [2024-07-24 02:15:23,068] [pool-1-thread-12] Initializing /data/qa-11394/f1 lateral 25hpf yen4 20X timelapse.vsi:
[testng] [2024-07-24 02:15:24,165] [pool-1-thread-4] Initializing /data/samples/Process/Epithelial Cells3.tif:
[testng] [2024-07-24 02:15:24,248] [pool-1-thread-10] Initializing /data/samples/Colocalisation/Daisy_Coloc.vsi:
[testng] [2024-07-24 02:15:24,869] [pool-1-thread-12] Initializing /data/samples/Measurement & ROI/Oxyuranus_microlepidotus.tif:
[testng] [2024-07-24 02:15:25,197] [pool-1-thread-4] Initializing /data/qa-11039/Image_01.vsi:
[testng] [2024-07-24 02:15:25,323] [pool-1-thread-10] Initializing /data/anda/Image_01_V76 K2 11_lung.thumbnail.jpg:
[testng] [2024-07-24 02:15:25,649] [pool-1-thread-10] Initializing /data/samples/Channels/svens cells - green.tif:
[testng] [2024-07-24 02:15:25,963] [pool-1-thread-12] Initializing /data/samples/Deconvolution/_islets_40X_2_/_islets_40X_2_/stack1/frame_t_0.ets:
[testng] [2024-07-24 02:15:26,598] [pool-1-thread-10] Initializing /data/olivier/14-09-2012/Image_07.vsi:
[testng] [2024-07-24 02:15:26,618] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile)
[testng] [2024-07-24 02:15:27,284] [pool-1-thread-12] Initializing /data/samples/Channels/svens cells - DIC.tif:
[testng] [2024-07-24 02:15:28,220] [pool-1-thread-12] Initializing /data/samples/Channels/svens cells - red.tif:
[testng] [2024-07-24 02:15:29,143] [pool-1-thread-12] Initializing /data/samples/Count & Measure/color squares.tif:
[testng] [2024-07-24 02:15:30,409] [pool-1-thread-12] Initializing /data/public/evident/Image_V4.1_BF.vsi:
[testng] [2024-07-24 02:15:31,302] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile)
[testng] [2024-07-24 02:15:37,567] [pool-1-thread-3] Initializing /data/samples/Count & Measure/color dots.tif:
[testng] [2024-07-24 02:15:38,806] [pool-1-thread-3] Initializing /data/samples/Image SHOW/HER2_FISH Assay.tif:
[testng] [2024-07-24 02:15:39,030] [pool-1-thread-6] Initializing /data/samples/Deconvolution/_chroma liver 40x 8 planes_/stack1/frame_t_0.ets:
[testng] [2024-07-24 02:15:39,856] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile)
[testng] [2024-07-24 02:15:40,387] [pool-1-thread-3] Initializing /data/olivier/26-10-2014/Image_27.vsi:
[testng] [2024-07-24 02:15:40,588] [pool-1-thread-6] Initializing /data/samples/Fluorescence Unmixing/HeLa_GFP_only.tif:
[testng] [2024-07-24 02:15:41,074] [pool-1-thread-6] Initializing /data/olivier/Image_06.vsi:
[testng] [2024-07-24 02:15:48,585] [pool-1-thread-9] Initializing /data/gh-3859/Image_Test2.vsi:
[testng] [2024-07-24 02:16:10,601] [pool-1-thread-8] Initializing /data/olivier/Stress47_02.vsi:
[testng] [2024-07-24 02:16:15,641] [pool-1-thread-5] Initializing /data/samples/Fluorescence Unmixing/HeLa_YFP_only.tif:
[testng] [2024-07-24 02:16:16,208] [pool-1-thread-5] Initializing /data/samples/Measurement & ROI/Snake.tif:
[testng] [2024-07-24 02:16:16,929] [pool-1-thread-5] Initializing /data/samples/Deconvolution/Skin 2.tif:
[testng] [2024-07-24 02:16:17,615] [pool-1-thread-5] Initializing /data/samples/Fluorescence/drehung.avi:
[testng] [2024-07-24 02:16:18,170] [pool-1-thread-5] Initializing /data/brian/Image_28.vsi:
[testng] [2024-07-24 02:16:20,525] [pool-1-thread-6] Initializing /data/david/smithd_20111115_1.vsi:
[testng] [2024-07-24 02:16:45,305] [pool-1-thread-11] Initializing /data/samples/Deconvolution/Silver birch raw.vsi:
[testng] [2024-07-24 02:16:45,956] [pool-1-thread-11] Initializing /data/anda/Image_01_V76 K2 11_lung.vsi:
[testng] [2024-07-24 02:16:56,744] [pool-1-thread-8] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack.vsi:
[testng] [2024-07-24 02:16:57,827] [pool-1-thread-8] Initializing /data/samples/Fluorescence/Plant FL 100x 29 Z CI Decon2.vsi:
[testng] [2024-07-24 02:16:58,674] [pool-1-thread-8] Initializing /data/anthony/11R1398A1.vsi:
[testng] [2024-07-24 02:17:02,861] [pool-1-thread-9] Initializing /data/gh-3822/image.jp2:
[testng] [2024-07-24 02:17:04,830] [pool-1-thread-3] Initializing /data/michelle/FC(26)-19 Gadd45b 1hr_20121011_01.vsi:
[testng] [2024-07-24 02:17:08,652] [pool-1-thread-9] Initializing /data/robert/Lung_Mite.vsi:
[testng] [2024-07-24 02:17:10,262] [pool-1-thread-9] Initializing /data/olivier/7262 wt col.vsi:
[testng] [2024-07-24 02:17:13,756] [pool-1-thread-11] Initializing /data/public/evident/Image_V4.1_FL_3D.vsi:
[testng] [2024-07-24 02:17:20,524] [pool-1-thread-12] Initializing /data/samples/Count & Measure/slide IHC.tif:
[testng] [2024-07-24 02:17:21,902] [pool-1-thread-1] Initializing /data/samples/Fluorescence Unmixing/HeLa_original.tif:
[testng] [2024-07-24 02:17:22,046] [pool-1-thread-12] Initializing /data/brian/SW10082402-02_21.vsi:
[testng] [2024-07-24 02:17:22,799] [pool-1-thread-1] Initializing /data/johannes/PSF_green_1.vsi:
[testng] [2024-07-24 02:17:23,791] [pool-1-thread-1] Initializing /data/samples/Process/HER2_FISH Assay.tif:
[testng] [2024-07-24 02:17:24,965] [pool-1-thread-1] Initializing /data/olivier/14-09-2012/Image_01.vsi:
[testng] [2024-07-24 02:17:55,278] [pool-1-thread-6] Initializing /data/samples/Channels/svens cells - blue.tif:
[testng] [2024-07-24 02:17:56,300] [pool-1-thread-6] Initializing /data/alex/test.vsi:
[testng] [2024-07-24 02:17:57,368] [pool-1-thread-6] Initializing /data/qa-29751/VSI-import-example-file.vsi:
[testng] [2024-07-24 02:18:20,582] [pool-1-thread-12] Initializing /data/samples/Fluorescence Unmixing/HeLa_unmixed.tif:
[testng] [2024-07-24 02:18:21,492] [pool-1-thread-12] Initializing /data/david/Image_normal_skin with hair/Image_normal_skin with hair.vsi:
[testng] [2024-07-24 02:18:26,866] [pool-1-thread-5] Initializing /data/olivier/small-tiles/esgTS-+;Sox21a[6]-+_30D25_09.vsi:
[testng] [2024-07-24 02:18:29,975] [pool-1-thread-9] Initializing /data/anda/Image_01_V76 K2 11_lung.overview.jpg:
[testng] [2024-07-24 02:18:37,430] [pool-1-thread-10] Initializing /data/gh-3819/H30-18-endo-sost-40x.vsi:
[testng] [2024-07-24 02:18:45,065] [pool-1-thread-9] Initializing /data/samples/Fluorescence/Dako_CISH.vsi:
[testng] [2024-07-24 02:18:45,256] [pool-1-thread-10] Initializing /data/samples/Channels/Composite.vsi:
[testng] [2024-07-24 02:18:46,142] [pool-1-thread-10] Initializing /data/samples/Image SHOW/Layer&Channels.tif:
[testng] [2024-07-24 02:18:47,253] [pool-1-thread-10] Initializing /data/samples/Shading Correction/Micrometer Background.tif:
[testng] [2024-07-24 02:18:47,872] [pool-1-thread-10] Initializing /data/samples/Measurement & ROI/Cell Multichannel-M&R.tif:
[testng] [2024-07-24 02:18:48,798] [pool-1-thread-10] Initializing /data/olivier/26-10-2014/Image_27_2.vsi:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 3816, Failures: 3, Skips: 0
[testng] ===============================================
[testng]
[testng] The tests failed.
BUILD FAILED
/bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest
Total time: 14 minutes 44 seconds
Build step 'Execute shell' marked build as failure
Finished: FAILURE