Started by upstream project "BIOFORMATS-test-repo" build number 132
originally caused by:
Started by upstream project "Trigger" build number 152
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins3538357902066369024.sh
+ '[' cri = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_20731_merge_ci -v /uod/idr/repos/curated/cri:/data -v /uod/idr-scratch/merge-ci/curated/cri:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 11:41:25,227 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 11:41:25,228 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
[testng] 11:41:25,228 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 11:41:25,229 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 11:41:25,230 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 11:41:25,230 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 11:41:25,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 11:41:25,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 11:41:25,231 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 11:41:25,231 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 11:41:25,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 11:41:25,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 11:41:25,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 11:41:25,396 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 11:41:25,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 11:41:25,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 11:41:25,428 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 11:41:25,428 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 11:41:25,428 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 11:41:25,429 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 11:41:25,429 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
[testng] 11:41:25,429 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
[testng] 11:41:25,430 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 199 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-25 11:41:25,439] [main] java.version = 21
[testng] 11:41:25,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 11:41:25,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:25,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-25_11-41-25.log]
[testng] 11:41:25,485 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
[testng] [2024-07-25 11:41:25,487] [main] testng.directory = /data
[testng] [2024-07-25 11:41:25,487] [main] testng.configDirectory = /config
[testng] [2024-07-25 11:41:25,496] [main] testng.multiplier = 1.0
[testng] [2024-07-25 11:41:25,497] [main] testng.in-memory = false
[testng] [2024-07-25 11:41:25,497] [main] testng.allow-missing = false
[testng] [2024-07-25 11:41:25,497] [main] user.language = en
[testng] [2024-07-25 11:41:25,497] [main] user.country = ${user.country}
[testng] [2024-07-25 11:41:25,497] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-25 11:41:26,258] [main] ----------------------------------------
[testng] [2024-07-25 11:41:26,258] [main] Total files: 96
[testng] [2024-07-25 11:41:26,258] [main] Scan time: 0.761 s (7 ms/file)
[testng] [2024-07-25 11:41:26,258] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 96 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-25 11:41:33,560] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_540.tif:
[testng] 11:41:33,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 11:41:33,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,563 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-25_11-41-33.log]
[testng] 11:41:33,563 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44d6392 - End of configuration.
[testng] [2024-07-25 11:41:33,607] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_760.tif:
[testng] 11:41:33,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 11:41:33,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,621 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-25_11-41-33.log]
[testng] 11:41:33,621 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1321c33 - End of configuration.
[testng] [2024-07-25 11:41:33,676] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_860.tif:
[testng] 11:41:33,676 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 11:41:33,676 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,677 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-25_11-41-33.log]
[testng] 11:41:33,677 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cc643e6 - End of configuration.
[testng] [2024-07-25 11:41:33,741] [pool-1-thread-10] Initializing /data/thomas/B3 DAPI.im3:
[testng] 11:41:33,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 11:41:33,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,742 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-25_11-41-33.log]
[testng] 11:41:33,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@427bcc7d - End of configuration.
[testng] [2024-07-25 11:41:33,780] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_770.tif:
[testng] 11:41:33,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 11:41:33,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,781 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-25_11-41-33.log]
[testng] 11:41:33,782 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77863339 - End of configuration.
[testng] [2024-07-25 11:41:33,812] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_810.tif:
[testng] 11:41:33,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 11:41:33,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,813 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-25_11-41-33.log]
[testng] 11:41:33,813 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73d28099 - End of configuration.
[testng] [2024-07-25 11:41:33,852] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_720.tif:
[testng] 11:41:33,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 11:41:33,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-25_11-41-33.log]
[testng] 11:41:33,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76e83d7e - End of configuration.
[testng] [2024-07-25 11:41:33,882] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_700.tif:
[testng] 11:41:33,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 11:41:33,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-25_11-41-33.log]
[testng] 11:41:33,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c088711 - End of configuration.
[testng] [2024-07-25 11:41:33,909] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_620.tif:
[testng] 11:41:33,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 11:41:33,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-25_11-41-33.log]
[testng] 11:41:33,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30242494 - End of configuration.
[testng] [2024-07-25 11:41:33,937] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_900.tif:
[testng] 11:41:33,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 11:41:33,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-25_11-41-33.log]
[testng] 11:41:33,938 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69bce35c - End of configuration.
[testng] [2024-07-25 11:41:33,961] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_690.tif:
[testng] 11:41:33,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 11:41:33,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,963 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-25_11-41-33.log]
[testng] 11:41:33,963 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ee272da - End of configuration.
[testng] [2024-07-25 11:41:33,991] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_610.tif:
[testng] 11:41:33,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 11:41:33,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:41:33,992 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-25_11-41-33.log]
[testng] 11:41:33,993 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bd11036 - End of configuration.
[testng] [2024-07-25 11:41:36,051] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_580.tif:
[testng] [2024-07-25 11:41:36,078] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_590.tif:
[testng] [2024-07-25 11:41:36,110] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_560.tif:
[testng] [2024-07-25 11:41:36,136] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_560.tif:
[testng] [2024-07-25 11:41:36,187] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_920.tif:
[testng] [2024-07-25 11:41:36,217] [pool-1-thread-12] Initializing /data/thomas/B3 FITC Metadata.bmp:
[testng] [2024-07-25 11:41:36,226] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_900.tif:
[testng] [2024-07-25 11:41:36,278] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_820.tif:
[testng] [2024-07-25 11:41:36,312] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_700.tif:
[testng] [2024-07-25 11:41:36,343] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_540.tif:
[testng] [2024-07-25 11:41:36,371] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_940.tif:
[testng] [2024-07-25 11:41:36,410] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_830.tif:
[testng] [2024-07-25 11:41:37,135] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_660.tif:
[testng] [2024-07-25 11:41:37,199] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_910.tif:
[testng] [2024-07-25 11:41:37,315] [pool-1-thread-12] Initializing /data/thomas/B3 FITC.im3:
[testng] [2024-07-25 11:41:37,362] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_810.tif:
[testng] [2024-07-25 11:41:37,404] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_500.tif:
[testng] [2024-07-25 11:41:37,504] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_850.tif:
[testng] [2024-07-25 11:41:37,542] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_520.tif:
[testng] [2024-07-25 11:41:37,582] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_650.tif:
[testng] [2024-07-25 11:41:37,605] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_830.tif:
[testng] [2024-07-25 11:41:37,629] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_570.tif:
[testng] [2024-07-25 11:41:37,658] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_820.tif:
[testng] [2024-07-25 11:41:37,706] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_640.tif:
[testng] [2024-07-25 11:41:38,323] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_870.tif:
[testng] [2024-07-25 11:41:38,373] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_510.tif:
[testng] [2024-07-25 11:41:38,445] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_890.tif:
[testng] [2024-07-25 11:41:38,478] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_670.tif:
[testng] [2024-07-25 11:41:38,525] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_850.tif:
[testng] [2024-07-25 11:41:38,562] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_680.tif:
[testng] [2024-07-25 11:41:38,598] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_950.tif:
[testng] [2024-07-25 11:41:38,664] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_800.tif:
[testng] [2024-07-25 11:41:38,723] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_940.tif:
[testng] [2024-07-25 11:41:38,789] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_570.tif:
[testng] [2024-07-25 11:41:38,831] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_630.tif:
[testng] [2024-07-25 11:41:39,028] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_770.tif:
[testng] [2024-07-25 11:41:39,512] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_780.tif:
[testng] [2024-07-25 11:41:39,552] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_530.tif:
[testng] [2024-07-25 11:41:39,589] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_730.tif:
[testng] [2024-07-25 11:41:39,631] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_600.tif:
[testng] [2024-07-25 11:41:39,663] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_840.tif:
[testng] [2024-07-25 11:41:39,695] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_680.tif:
[testng] [2024-07-25 11:41:39,716] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_670.tif:
[testng] [2024-07-25 11:41:39,748] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_650.tif:
[testng] [2024-07-25 11:41:39,788] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_950.tif:
[testng] [2024-07-25 11:41:39,825] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_800.tif:
[testng] [2024-07-25 11:41:39,869] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_710.tif:
[testng] [2024-07-25 11:41:40,224] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_790.tif:
[testng] [2024-07-25 11:41:40,683] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_840.tif:
[testng] [2024-07-25 11:41:40,720] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_500.tif:
[testng] [2024-07-25 11:41:40,758] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_790.tif:
[testng] [2024-07-25 11:41:40,794] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_640.tif:
[testng] [2024-07-25 11:41:40,834] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_930.tif:
[testng] [2024-07-25 11:41:40,874] [pool-1-thread-3] Initializing /data/thomas/B3 DAPI Metadata.bmp:
[testng] [2024-07-25 11:41:40,885] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_880.tif:
[testng] [2024-07-25 11:41:40,920] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_550.tif:
[testng] [2024-07-25 11:41:40,959] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_510.tif:
[testng] [2024-07-25 11:41:41,001] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_590.tif:
[testng] [2024-07-25 11:41:41,039] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_710.tif:
[testng] [2024-07-25 11:41:41,085] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_630.tif:
[testng] [2024-07-25 11:41:41,503] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_720.tif:
[testng] [2024-07-25 11:41:41,854] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_660.tif:
[testng] [2024-07-25 11:41:41,898] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_740.tif:
[testng] [2024-07-25 11:41:41,944] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_920.tif:
[testng] [2024-07-25 11:41:41,985] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_750.tif:
[testng] [2024-07-25 11:41:42,025] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_520.tif:
[testng] [2024-07-25 11:41:42,075] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_910.tif:
[testng] [2024-07-25 11:41:42,112] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_610.tif:
[testng] [2024-07-25 11:41:42,154] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_740.tif:
[testng] [2024-07-25 11:41:42,219] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_750.tif:
[testng] [2024-07-25 11:41:42,286] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_550.tif:
[testng] [2024-07-25 11:41:42,342] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_530.tif:
[testng] [2024-07-25 11:41:42,819] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_890.tif:
[testng] [2024-07-25 11:41:43,078] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_780.tif:
[testng] [2024-07-25 11:41:43,099] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_690.tif:
[testng] [2024-07-25 11:41:43,121] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_580.tif:
[testng] [2024-07-25 11:41:43,148] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_880.tif:
[testng] [2024-07-25 11:41:43,173] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_860.tif:
[testng] [2024-07-25 11:41:43,198] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_870.tif:
[testng] [2024-07-25 11:41:43,222] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_730.tif:
[testng] [2024-07-25 11:41:43,245] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_620.tif:
[testng] [2024-07-25 11:41:43,267] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_600.tif:
[testng] [2024-07-25 11:41:43,288] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_760.tif:
[testng] [2024-07-25 11:41:43,309] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_930.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5088, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 21 seconds
Finished: SUCCESS