Started by upstream project "BIOFORMATS-test-repo" build number 133
originally caused by:
Started by upstream project "Trigger" build number 153
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins14065432309365968545.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_20804_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:22:24,628 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:22:24,630 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:22:24,630 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:24,631 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:24,631 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:22:24,631 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:22:24,632 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:22:24,632 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:24,632 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:24,632 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:22:24,632 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:22:24,633 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:22:24,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:22:24,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:22:24,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:22:24,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:22:24,902 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:22:24,902 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:22:24,902 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:22:24,902 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:22:24,902 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:22:24,903 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:22:24,903 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 271 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-26 01:22:24,913] [main] java.version = 1.8.0_342
[testng] 01:22:24,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:22:24,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:24,961 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-26_01-22-24.log]
[testng] 01:22:24,962 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-26 01:22:24,964] [main] testng.directory = /data
[testng] [2024-07-26 01:22:24,964] [main] testng.configDirectory = /config
[testng] [2024-07-26 01:22:24,976] [main] testng.multiplier = 1.0
[testng] [2024-07-26 01:22:24,976] [main] testng.in-memory = false
[testng] [2024-07-26 01:22:24,976] [main] testng.allow-missing = false
[testng] [2024-07-26 01:22:24,976] [main] user.language = en
[testng] [2024-07-26 01:22:24,976] [main] user.country = ${user.country}
[testng] [2024-07-26 01:22:24,976] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-26 01:22:25,865] [main] ----------------------------------------
[testng] [2024-07-26 01:22:25,865] [main] Total files: 103
[testng] [2024-07-26 01:22:25,865] [main] Scan time: 0.888 s (8 ms/file)
[testng] [2024-07-26 01:22:25,865] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-26 01:22:33,435] [pool-1-thread-1] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] 01:22:33,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:22:33,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,436 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-26_01-22-33.log]
[testng] 01:22:33,436 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1da1f217 - End of configuration.
[testng] [2024-07-26 01:22:33,464] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] 01:22:33,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:22:33,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,465 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-26_01-22-33.log]
[testng] 01:22:33,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b11c43f - End of configuration.
[testng] [2024-07-26 01:22:33,479] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3:
[testng] 01:22:33,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:22:33,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-26_01-22-33.log]
[testng] 01:22:33,480 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b533ab5 - End of configuration.
[testng] [2024-07-26 01:22:33,497] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] 01:22:33,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:22:33,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-26_01-22-33.log]
[testng] 01:22:33,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bc7996 - End of configuration.
[testng] [2024-07-26 01:22:33,524] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] 01:22:33,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:22:33,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-26_01-22-33.log]
[testng] 01:22:33,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e6d60b0 - End of configuration.
[testng] [2024-07-26 01:22:33,577] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] 01:22:33,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:22:33,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,578 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-26_01-22-33.log]
[testng] 01:22:33,578 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55d14953 - End of configuration.
[testng] [2024-07-26 01:22:33,589] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] 01:22:33,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:22:33,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,590 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-26_01-22-33.log]
[testng] 01:22:33,590 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ec4b93d - End of configuration.
[testng] [2024-07-26 01:22:33,710] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] 01:22:33,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:22:33,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-26_01-22-33.log]
[testng] 01:22:33,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7782f36 - End of configuration.
[testng] [2024-07-26 01:22:33,723] [pool-1-thread-5] Initializing /data/jay/recAmaghi.dm3:
[testng] 01:22:33,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:22:33,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,725 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-26_01-22-33.log]
[testng] 01:22:33,725 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13688d1d - End of configuration.
[testng] [2024-07-26 01:22:33,749] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] 01:22:33,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:22:33,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,750 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-26_01-22-33.log]
[testng] 01:22:33,750 |-INFO in ch.qos.logback.core.sift.SiftProcessor@628a0f2b - End of configuration.
[testng] [2024-07-26 01:22:33,777] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] 01:22:33,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:22:33,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,778 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-26_01-22-33.log]
[testng] 01:22:33,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f860088 - End of configuration.
[testng] [2024-07-26 01:22:33,867] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] 01:22:33,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:22:33,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:33,867 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-26_01-22-33.log]
[testng] 01:22:33,868 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31a5783a - End of configuration.
[testng] [2024-07-26 01:22:37,265] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-07-26 01:22:37,309] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-07-26 01:22:37,621] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-07-26 01:22:37,821] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-07-26 01:22:38,244] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-07-26 01:22:38,484] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-07-26 01:22:39,167] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-07-26 01:22:39,435] [pool-1-thread-4] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-07-26 01:22:39,789] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-07-26 01:22:39,896] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-07-26 01:22:39,907] [pool-1-thread-5] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-07-26 01:22:40,401] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-07-26 01:22:40,767] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-07-26 01:22:41,941] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-07-26 01:22:42,578] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-07-26 01:22:42,679] [pool-1-thread-6] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-07-26 01:22:43,529] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-07-26 01:22:44,558] [pool-1-thread-10] Initializing /data/qa-7642/8.dm4:
[testng] [2024-07-26 01:22:45,746] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-07-26 01:22:46,441] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-07-26 01:22:46,462] [pool-1-thread-5] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-07-26 01:22:46,819] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-07-26 01:22:47,628] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-07-26 01:22:47,652] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-07-26 01:22:47,932] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-07-26 01:22:49,021] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-07-26 01:22:50,111] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-07-26 01:22:50,454] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-07-26 01:22:50,784] [pool-1-thread-4] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-07-26 01:22:52,565] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-07-26 01:22:52,786] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-07-26 01:22:52,883] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-07-26 01:22:54,513] [pool-1-thread-6] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-07-26 01:22:54,679] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-07-26 01:22:54,910] [pool-1-thread-7] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-07-26 01:22:54,997] [pool-1-thread-4] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-07-26 01:22:55,422] [pool-1-thread-10] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-07-26 01:22:55,766] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-07-26 01:22:56,464] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-07-26 01:22:58,894] [pool-1-thread-5] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-07-26 01:22:59,988] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-07-26 01:23:00,752] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-07-26 01:23:01,189] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-07-26 01:23:02,167] [pool-1-thread-7] Initializing /data/jay/dnasample.tif:
[testng] [2024-07-26 01:23:02,350] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-07-26 01:23:03,150] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-07-26 01:23:04,427] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-07-26 01:23:04,517] [pool-1-thread-6] Initializing /data/qa-21761/example.dm4:
[testng] [2024-07-26 01:23:04,718] [pool-1-thread-3] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-07-26 01:23:04,818] [pool-1-thread-5] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-07-26 01:23:06,159] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-07-26 01:23:06,263] [pool-1-thread-6] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-07-26 01:23:07,687] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-07-26 01:23:08,337] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-07-26 01:23:09,064] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3:
[testng] [2024-07-26 01:23:09,695] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-07-26 01:23:09,887] [pool-1-thread-12] Initializing /data/jay/DMtest.dm3:
[testng] [2024-07-26 01:23:09,944] [pool-1-thread-5] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-07-26 01:23:11,073] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-07-26 01:23:11,413] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-07-26 01:23:12,516] [pool-1-thread-6] Initializing /data/jay/camtest1.dm3:
[testng] [2024-07-26 01:23:12,685] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-07-26 01:23:13,363] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-07-26 01:23:13,553] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-07-26 01:23:13,925] [pool-1-thread-11] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-07-26 01:23:14,414] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-07-26 01:23:14,425] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-07-26 01:23:14,589] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-07-26 01:23:14,650] [pool-1-thread-8] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-07-26 01:23:14,792] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-07-26 01:23:15,348] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-07-26 01:23:15,734] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-07-26 01:23:15,842] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-07-26 01:23:16,445] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-07-26 01:23:16,597] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-07-26 01:23:16,636] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-07-26 01:23:17,236] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-07-26 01:23:17,860] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-07-26 01:23:17,998] [pool-1-thread-2] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-07-26 01:23:18,221] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-07-26 01:23:18,986] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-07-26 01:23:19,175] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-07-26 01:23:19,295] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-07-26 01:23:19,341] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-07-26 01:23:19,540] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-07-26 01:23:19,681] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 14 seconds
Finished: SUCCESS