Started by upstream project "BIOFORMATS-test-repo" build number 133
originally caused by:
Started by upstream project "Trigger" build number 153
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins6735519065362026704.sh
+ '[' leica-lif = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_20960_merge_ci -v /uod/idr/repos/curated/leica-lif:/data -v /uod/idr-scratch/merge-ci/curated/leica-lif:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:55:19,870 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:55:19,872 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 02:55:19,872 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:55:19,873 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:55:19,873 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:55:19,873 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:55:19,874 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:55:19,874 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:55:19,874 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:55:19,875 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:55:19,875 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:55:19,875 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:55:20,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:55:20,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:55:20,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:55:20,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:55:20,164 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:55:20,164 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:55:20,165 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:55:20,165 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:55:20,165 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 02:55:20,166 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 02:55:20,166 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 292 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-26 02:55:20,177] [main] java.version = 1.8.0_342
[testng] 02:55:20,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:55:20,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:55:20,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-26_02-55-20.log]
[testng] 02:55:20,229 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-26 02:55:20,231] [main] testng.directory = /data
[testng] [2024-07-26 02:55:20,231] [main] testng.configDirectory = /config
[testng] [2024-07-26 02:55:20,244] [main] testng.multiplier = 1.0
[testng] [2024-07-26 02:55:20,244] [main] testng.in-memory = false
[testng] [2024-07-26 02:55:20,244] [main] testng.allow-missing = false
[testng] [2024-07-26 02:55:20,245] [main] user.language = en
[testng] [2024-07-26 02:55:20,245] [main] user.country = ${user.country}
[testng] [2024-07-26 02:55:20,245] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-26 02:59:06,733] [main] ----------------------------------------
[testng] [2024-07-26 02:59:06,733] [main] Total files: 402
[testng] [2024-07-26 02:59:06,734] [main] Scan time: 226.488 s (563 ms/file)
[testng] [2024-07-26 02:59:06,734] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 266 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-26 03:00:35,606] [pool-1-thread-1] Initializing /data/kristine/Kristine.lif:
[testng] 03:00:35,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 03:00:35,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:35,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-26_03-00-35.log]
[testng] 03:00:35,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b3e33aa - End of configuration.
[testng] [2024-07-26 03:00:35,916] [pool-1-thread-12] Initializing /data/andrew/Par6 GFP delaminating cells.lif:
[testng] 03:00:35,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 03:00:35,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:35,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-26_03-00-35.log]
[testng] 03:00:35,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37c7e15c - End of configuration.
[testng] [2024-07-26 03:00:36,038] [pool-1-thread-11] Initializing /data/qa-6635/2013_03_01_MLH1_SYCP3_HSPA2_16dpc_SC.lif:
[testng] 03:00:36,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 03:00:36,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,039 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-26_03-00-36.log]
[testng] 03:00:36,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7963b6e4 - End of configuration.
[testng] [2024-07-26 03:00:36,091] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y7.tif:
[testng] 03:00:36,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 03:00:36,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-26_03-00-36.log]
[testng] 03:00:36,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7efea28b - End of configuration.
[testng] [2024-07-26 03:00:36,147] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y5.tif:
[testng] 03:00:36,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 03:00:36,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-26_03-00-36.log]
[testng] 03:00:36,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b9fd86e - End of configuration.
[testng] [2024-07-26 03:00:36,199] [pool-1-thread-8] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP003_10um.png:
[testng] 03:00:36,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 03:00:36,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-26_03-00-36.log]
[testng] 03:00:36,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e64c22 - End of configuration.
[testng] [2024-07-26 03:00:36,257] [pool-1-thread-7] Initializing /data/michael/2007-01-02_scanfield_check.lif:
[testng] 03:00:36,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 03:00:36,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,258 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-26_03-00-36.log]
[testng] 03:00:36,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bba3546 - End of configuration.
[testng] [2024-07-26 03:00:36,292] [pool-1-thread-6] Initializing /data/stefan/3D_Prionium_thick_stack.lif:
[testng] 03:00:36,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 03:00:36,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,293 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-26_03-00-36.log]
[testng] 03:00:36,293 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58520bb9 - End of configuration.
[testng] [2024-07-26 03:00:36,329] [pool-1-thread-5] Initializing /data/qa-10917/P2P-MS2-lacZ.lif:
[testng] 03:00:36,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 03:00:36,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,330 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-26_03-00-36.log]
[testng] 03:00:36,330 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cfe4245 - End of configuration.
[testng] [2024-07-26 03:00:36,429] [pool-1-thread-4] Initializing /data/pki/RA4 P3 x63.lif:
[testng] 03:00:36,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 03:00:36,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,430 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-26_03-00-36.log]
[testng] 03:00:36,430 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b1515bd - End of configuration.
[testng] [2024-07-26 03:00:36,468] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y1.tif:
[testng] 03:00:36,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 03:00:36,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,469 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-26_03-00-36.log]
[testng] 03:00:36,469 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3964142f - End of configuration.
[testng] [2024-07-26 03:00:36,558] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y0.tif:
[testng] 03:00:36,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 03:00:36,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:36,559 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-26_03-00-36.log]
[testng] 03:00:36,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@763efc8c - End of configuration.
[testng] [2024-07-26 03:00:39,850] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y6.tif:
[testng] [2024-07-26 03:00:39,870] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y8.tif:
[testng] [2024-07-26 03:00:39,911] [pool-1-thread-9] Initializing /data/melissa/Series001_z1.tif:
[testng] [2024-07-26 03:00:39,944] [pool-1-thread-10] Initializing /data/jcb/201007044/Figure 4D - F761.lif:
[testng] [2024-07-26 03:00:39,959] [pool-1-thread-11] Initializing /data/donald/DB180509_LSMdemo.lif:
[testng] [2024-07-26 03:00:40,031] [pool-1-thread-2] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch3.avi:
[testng] [2024-07-26 03:00:40,068] [pool-1-thread-4] Initializing /data/tony/December_806b.lif:
[testng] [2024-07-26 03:00:40,139] [pool-1-thread-8] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch3.avi:
[testng] [2024-07-26 03:00:40,631] [pool-1-thread-5] Initializing /data/tony/Scanerror-nested.lif:
[testng] [2024-07-26 03:00:40,665] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y6.tif:
[testng] [2024-07-26 03:00:40,788] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y2.tif:
[testng] [2024-07-26 03:00:41,001] [pool-1-thread-6] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP002_5um.png:
[testng] [2024-07-26 03:00:41,079] [pool-1-thread-8] Initializing /data/rich/TEST.lif:
[testng] [2024-07-26 03:00:41,271] [pool-1-thread-9] Initializing /data/andrew/LIF Lambda/Image J Grab.tiff:
[testng] [2024-07-26 03:00:41,355] [pool-1-thread-3] Initializing /data/ki/Experiment_001.lif:
[testng] [2024-07-26 03:00:41,841] [pool-1-thread-8] Initializing /data/olivier/120404_Li011_200V.lif:
[testng] [2024-07-26 03:00:41,994] [pool-1-thread-7] Initializing /data/stefan/Rx3GFP280907.lif:
[testng] [2024-07-26 03:00:42,451] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y4.tif:
[testng] [2024-07-26 03:00:42,662] [pool-1-thread-5] Initializing /data/christian/20090323illutest_BFmisaligned.lif:
[testng] [2024-07-26 03:00:42,847] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y7.tif:
[testng] [2024-07-26 03:00:42,910] [pool-1-thread-6] Initializing /data/fabrice/Clipboard-1.jpg:
[testng] [2024-07-26 03:00:42,921] [pool-1-thread-4] Initializing /data/qa-16911/DM6000_colour-camera-12bit.lif:
[testng] [2024-07-26 03:00:43,311] [pool-1-thread-1] Initializing /data/sagar/c55 scatter stage 14.lif:
[testng] [2024-07-26 03:00:43,380] [pool-1-thread-8] Initializing /data/vytas/data samples.lif:
[testng] [2024-07-26 03:00:43,467] [pool-1-thread-6] Initializing /data/alexander/20120224.lif:
[testng] [2024-07-26 03:00:43,741] [pool-1-thread-5] Initializing /data/schek/Experiment_001_2010.lif:
[testng] [2024-07-26 03:00:43,881] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y5.tif:
[testng] [2024-07-26 03:00:43,930] [pool-1-thread-10] Initializing /data/jcb/JCB 201203109/FIG2D STAT3-EYFP BDNF.lif:
[testng] [2024-07-26 03:00:43,976] [pool-1-thread-9] Initializing /data/stefan/spe.tif:
[testng] [2024-07-26 03:00:44,045] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y3.tif:
[testng] [2024-07-26 03:00:44,182] [pool-1-thread-11] Initializing /data/vytas/Series008_t000_ch00.tif:
[testng] [2024-07-26 03:00:44,640] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y3.tif:
[testng] [2024-07-26 03:00:44,995] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y2.tif:
[testng] [2024-07-26 03:00:45,063] [pool-1-thread-3] Initializing /data/jerome/E346_268_cutceaf.lif:
[testng] [2024-07-26 03:00:45,338] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y1.tif:
[testng] [2024-07-26 03:00:45,598] [pool-1-thread-9] Initializing /data/mario/2007-11-12_L15_AF001.lif:
[testng] [2024-07-26 03:00:45,809] [pool-1-thread-8] Initializing /data/melissa/roi-test-1.xml:
[testng] [2024-07-26 03:00:45,956] [pool-1-thread-12] Initializing /data/andrew/New XZY LIF Upload/Right Order/Right Order Montage.tif:
[testng] [2024-07-26 03:00:46,051] [pool-1-thread-6] Initializing /data/melissa/LIF2_test-with-ROIs.lif:
[testng] [2024-07-26 03:00:46,235] [pool-1-thread-5] Initializing /data/andrew/LIF Lambda/Montage of Alexa 488 Lambda.tif:
[testng] [2024-07-26 03:00:46,533] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y7.tif:
[testng] [2024-07-26 03:00:46,696] [pool-1-thread-8] Initializing /data/public/imagesc-30856/20191025 Test FRET 585. 423, 426.lif:
[testng] [2024-07-26 03:00:46,816] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y5.tif:
[testng] [2024-07-26 03:00:47,212] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch2.avi:
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[testng] [2024-07-26 03:00:48,750] [pool-1-thread-1] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP000_1um.png:
[testng] [2024-07-26 03:00:48,761] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y8.tif:
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[testng] [2024-07-26 03:00:49,446] [pool-1-thread-8] Initializing /data/claude/1A.lif:
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[testng] [2024-07-26 03:00:50,278] [pool-1-thread-1] Initializing /data/vytas/Experiment not horrid.lif:
[testng] [2024-07-26 03:00:50,593] [pool-1-thread-5] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order.tif:
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[testng] [2024-07-26 03:00:50,890] [pool-1-thread-2] Initializing /data/garcion/testOne.lif:
[testng] [2024-07-26 03:00:51,065] [pool-1-thread-6] Initializing /data/tommaso/Midollo GFAP 27.10.10 OXA+PEA 40x.lif:
[testng] [2024-07-26 03:00:51,678] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y4.tif:
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[testng] [2024-07-26 03:00:51,913] [pool-1-thread-12] Initializing /data/fabrice/Rosier.lif:
[testng] [2024-07-26 03:00:52,259] [pool-1-thread-7] Initializing /data/jcb/Figure 1A.lif:
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[testng] [2024-07-26 03:00:54,345] [pool-1-thread-7] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP001_2_5um.png:
[testng] [2024-07-26 03:00:54,408] [pool-1-thread-12] Initializing /data/peter/20110916D.lif:
[testng] [2024-07-26 03:00:55,511] [pool-1-thread-5] Initializing /data/public/michael/PR2729_frameOrderCombinedScanTypes.lif:
[testng] [2024-07-26 03:00:55,715] [pool-1-thread-2] Initializing /data/olivier/tiled/Mike.lif:
[testng] [2024-07-26 03:00:55,820] [pool-1-thread-5] Initializing /data/garcion/testTwo.lif:
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[testng] [2024-07-26 03:00:57,038] [pool-1-thread-6] Initializing /data/jean-marie/20100827G1.lif:
[testng] [2024-07-26 03:00:57,516] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order.tif:
[testng] [2024-07-26 03:01:00,163] [pool-1-thread-1] Initializing /data/christophe/test_greys_with_roi.lif:
[testng] [2024-07-26 03:01:00,180] [pool-1-thread-6] Initializing /data/stephen/Timelapse of RG An embryos.lif:
[testng] [2024-07-26 03:01:00,240] [pool-1-thread-7] Initializing /data/ian/TGN647sh-GM130-532_10mMEA_03.lif:
[testng] [2024-07-26 03:01:00,305] [pool-1-thread-5] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/150519_FRAP_test_ROIs_chromagreen.lif:
[testng] [2024-07-26 03:01:00,465] [pool-1-thread-9] Initializing /data/dirk/Mag-test.lif:
[testng] [2024-07-26 03:01:00,517] [pool-1-thread-3] Initializing /data/stefan/Rx3GFP280907pos003.lif:
[testng] [2024-07-26 03:01:01,072] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y5.tif:
[testng] [2024-07-26 03:01:01,308] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y1.tif:
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[testng] [2024-07-26 03:01:03,050] [pool-1-thread-5] Initializing /data/melissa/roi-test-0.lif:
[testng] [2024-07-26 03:01:03,213] [pool-1-thread-9] Initializing /data/andrew/LIF Lambda/Lambda 1.lif:
[testng] [2024-07-26 03:01:03,754] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y4.tif:
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[testng] [2024-07-26 03:01:03,905] [pool-1-thread-6] Initializing /data/richard/resolution check.lif:
[testng] [2024-07-26 03:01:04,181] [pool-1-thread-5] Initializing /data/claude/Short_1A.lif:
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[testng] [2024-07-26 03:01:04,494] [pool-1-thread-6] Initializing /data/stefan/exp02.lif:
[testng] [2024-07-26 03:01:04,726] [pool-1-thread-1] Initializing /data/andrew/Series 68 Multi from Image Sequence.tif:
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[testng] [2024-07-26 03:01:05,635] [pool-1-thread-9] Initializing /data/andrew/SP5 FRAP/ROI data.jpg:
[testng] [2024-07-26 03:01:06,762] [pool-1-thread-2] Initializing /data/jcb/201007044/Figure 4C - F505.lif:
[testng] [2024-07-26 03:01:06,990] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y3.tif:
[testng] [2024-07-26 03:01:07,357] [pool-1-thread-6] Initializing /data/vytas/LIFtest.lif:
[testng] [2024-07-26 03:01:08,645] [pool-1-thread-1] Initializing /data/jerome/E346_316.lif:
[testng] [2024-07-26 03:01:08,991] [pool-1-thread-4] Initializing /data/vytas/2014/2nd MeBl30 200MEA plus bkpmp end.lif:
[testng] [2024-07-26 03:01:09,151] [pool-1-thread-10] Initializing /data/schek/Experiment_001.lif:
[testng] [2024-07-26 03:01:09,276] [pool-1-thread-2] Initializing /data/andrew/FRAP_Test_250708.lif:
[testng] [2024-07-26 03:01:09,438] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y8.tif:
[testng] [2024-07-26 03:01:09,600] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y6.tif:
[testng] [2024-07-26 03:01:10,585] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y1.tif:
[testng] [2024-07-26 03:01:10,726] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y2.tif:
[testng] [2024-07-26 03:01:11,472] [pool-1-thread-9] Initializing /data/mark/Leica_FRAP_1channel_noZ-stack.lif:
[testng] [2024-07-26 03:01:11,673] [pool-1-thread-6] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch1.avi:
[testng] [2024-07-26 03:01:12,106] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y3.tif:
[testng] [2024-07-26 03:01:12,539] [pool-1-thread-3] Initializing /data/vytas/Experimenttest2.lif:
[testng] [2024-07-26 03:01:14,793] [pool-1-thread-4] Initializing /data/jcb/JCB 201112145/Figure 3A.lif:
[testng] [2024-07-26 03:01:14,827] [pool-1-thread-9] Initializing /data/fabrice/test 2.lif:
[testng] [2024-07-26 03:01:14,902] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y5.tif:
[testng] [2024-07-26 03:01:14,921] [pool-1-thread-3] Initializing /data/jcb/JCB 201112145/Figure 5B.lif:
[testng] [2024-07-26 03:01:14,938] [pool-1-thread-7] Initializing /data/claus/080118_group3.lif:
[testng] [2024-07-26 03:01:14,956] [pool-1-thread-1] Initializing /data/stefan/spe.lif:
[testng] [2024-07-26 03:01:15,484] [pool-1-thread-3] Initializing /data/fabrice/09-10-23 Tete de mouche.lif:
[testng] [2024-07-26 03:01:15,532] [pool-1-thread-6] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Wrong Order Merge.avi:
[testng] [2024-07-26 03:01:15,551] [pool-1-thread-4] Initializing /data/ville/single_channel.lif:
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[testng] [2024-07-26 03:01:15,619] [pool-1-thread-7] Initializing /data/schek/LIF2_test.lif:
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[testng] [2024-07-26 03:01:15,982] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y4.tif:
[testng] [2024-07-26 03:01:16,019] [pool-1-thread-9] Initializing /data/tony/Scanerror.lif:
[testng] [2024-07-26 03:01:16,054] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y1.tif:
[testng] [2024-07-26 03:01:16,131] [pool-1-thread-3] Initializing /data/christophe/070921_HN_Nav.lif:
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[testng] [2024-07-26 03:01:16,579] [pool-1-thread-10] Initializing /data/vytas/030510-esxA-mCherry 3.lif:
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[testng] [2024-07-26 03:01:17,265] [pool-1-thread-1] Initializing /data/alex/2010-11-29-test-for-OME.lif:
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[testng] [2024-07-26 03:01:17,615] [pool-1-thread-4] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch2.avi:
[testng] [2024-07-26 03:01:17,742] [pool-1-thread-9] Initializing /data/melissa/roi-test-1.lif:
[testng] [2024-07-26 03:01:17,873] [pool-1-thread-1] Initializing /data/martin-hoehne/Niere-Schnitt5.lif:
[testng] [2024-07-26 03:01:17,968] [pool-1-thread-2] Initializing /data/qa-21092/1-GBP1-CaaX+LLoMe.lif:
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[testng] [2024-07-26 03:01:18,209] [pool-1-thread-6] Initializing /data/vytas/20x deconvol demo.lif:
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[testng] [2024-07-26 03:01:18,538] [pool-1-thread-1] Initializing /data/martin/110921 Goedele.lif:
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[testng] [2024-07-26 03:01:19,612] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y1.tif:
[testng] [2024-07-26 03:01:19,781] [pool-1-thread-9] Initializing /data/mario/2007-11-13_DMEM_GFPcells.lif:
[testng] [2024-07-26 03:01:20,171] [pool-1-thread-7] Initializing /data/ville/expected output.png:
[testng] [2024-07-26 03:01:20,481] [pool-1-thread-3] Initializing /data/donald/DB_lambda_scans_Ab1_50 030809.lif:
[testng] [2024-07-26 03:01:20,541] [pool-1-thread-11] Initializing /data/stefan/p24_dfc.lif:
[testng] [2024-07-26 03:01:21,036] [pool-1-thread-2] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Merge.avi:
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[testng] [2024-07-26 03:01:21,206] [pool-1-thread-4] Initializing /data/chris/kees_friday2.lif:
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[testng] [2024-07-26 03:01:21,485] [pool-1-thread-11] Initializing /data/nicolas/Experiment.lif:
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[testng] [2024-07-26 03:01:23,618] [pool-1-thread-2] Initializing /data/tony/OPN_cy3_dapi_trab.lif:
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[testng] [2024-07-26 03:01:24,003] [pool-1-thread-9] Initializing /data/oliver/Single Channel Measurements.lif:
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[testng] [2024-07-26 03:01:24,681] [pool-1-thread-3] Initializing /data/pascal/test.lif:
[testng] [2024-07-26 03:01:25,611] [pool-1-thread-4] Initializing /data/andrew/Snapshots_1kx1k_150908.lif:
[testng] [2024-07-26 03:01:25,821] [pool-1-thread-6] Initializing /data/martin-hoehne/Niere-Schnitt-GFP-dTomato.lif:
[testng] [2024-07-26 03:01:26,339] [pool-1-thread-2] Initializing /data/qa-16919/DM6000_colour-camera-8bit.lif:
[testng] [2024-07-26 03:01:27,604] [pool-1-thread-1] Initializing /data/vytas/B6 mo2 g9c8 act tc DiD 20mil 24hrs after inj rbc DiI.lif:
[testng] [2024-07-26 03:01:28,975] [pool-1-thread-3] Initializing /data/kota/int_ok.lif:
[testng] [2024-07-26 03:01:30,288] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y9.tif:
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[testng] [2024-07-26 03:01:31,089] [pool-1-thread-6] Initializing /data/jcb/JCB 201203109/FIG 2D STAT3-EYFP CNTF.lif:
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[testng] [2024-07-26 03:01:33,136] [pool-1-thread-7] Initializing /data/stefan/actinFRAP.lif:
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[testng] [2024-07-26 03:01:34,044] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch1.avi:
[testng] [2024-07-26 03:01:34,240] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y7.tif:
[testng] [2024-07-26 03:01:34,782] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y0.tif:
[testng] [2024-07-26 03:01:34,888] [pool-1-thread-6] Initializing /data/olivier/tiled/bob.lif:
[testng] [2024-07-26 03:01:35,669] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y5.tif:
[testng] [2024-07-26 03:01:35,821] [pool-1-thread-9] Initializing /data/andrew/Snapshots_150908.lif:
[testng] [2024-07-26 03:01:35,903] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y4.tif:
[testng] [2024-07-26 03:01:36,338] [pool-1-thread-3] Initializing /data/qa-4791/TestFlorianDescription2.lif:
[testng] [2024-07-26 03:01:36,568] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y5.tif:
[testng] [2024-07-26 03:01:36,665] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y9.tif:
[testng] [2024-07-26 03:01:36,795] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y2.tif:
[testng] [2024-07-26 03:01:38,012] [pool-1-thread-2] Initializing /data/vytas/Image002_ch00.tif:
[testng] [2024-07-26 03:01:38,569] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y3.tif:
[testng] [2024-07-26 03:01:39,209] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y3.tif:
[testng] [2024-07-26 03:01:39,272] [pool-1-thread-10] Initializing /data/melissa/Series001_z0.tif:
[testng] [2024-07-26 03:01:39,346] [pool-1-thread-2] Initializing /data/pki/20111116preCK50.lif:
[testng] [2024-07-26 03:01:39,539] [pool-1-thread-7] Initializing /data/matthias/ms-beats.lif:
[testng] [2024-07-26 03:01:39,812] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y6.tif:
[testng] [2024-07-26 03:01:40,467] [pool-1-thread-10] Initializing /data/leon/leon002.lif:
[testng] [2024-07-26 03:01:40,508] [pool-1-thread-4] Initializing /data/stefan/p24b.lif:
[testng] [2024-07-26 03:01:40,915] [pool-1-thread-10] Initializing /data/sagar/forMelissa.lif:
[testng] [2024-07-26 03:01:40,936] [pool-1-thread-3] Initializing /data/fabrice/new/UL66 bicolore stacks + merge.lif:
[testng] [2024-07-26 03:01:41,205] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y6.tif:
[testng] [2024-07-26 03:01:41,447] [pool-1-thread-7] Initializing /data/matthias/experiment_020.lif:
[testng] [2024-07-26 03:01:41,497] [pool-1-thread-10] Initializing /data/olivier/STAGE CONFIG1.lif:
[testng] [2024-07-26 03:01:42,099] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y6.tif:
[testng] [2024-07-26 03:01:42,235] [pool-1-thread-4] Initializing /data/jerome/E345_312.lif:
[testng] [2024-07-26 03:01:42,315] [pool-1-thread-10] Initializing /data/tony/Celegeansexp01.lif:
[testng] [2024-07-26 03:01:42,772] [pool-1-thread-9] Initializing /data/andrew/FRAP_Test_12-0808.lif:
[testng] [2024-07-26 03:01:43,123] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/XZY Stacks.lif:
[testng] [2024-07-26 03:01:43,888] [pool-1-thread-7] Initializing /data/christophe/test_greys.lif:
[testng] [2024-07-26 03:01:44,611] [pool-1-thread-7] Initializing /data/andrew/SP5 FRAP/220311 FRAP YFP test.lif:
[testng] [2024-07-26 03:01:49,827] [pool-1-thread-1] Initializing /data/stefan/Experiment.lif:
[testng] [2024-07-26 03:01:49,854] [pool-1-thread-9] Initializing /data/oliver/100529.lif:
[testng] [2024-07-26 03:01:49,938] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y4.tif:
[testng] [2024-07-26 03:01:49,989] [pool-1-thread-7] Initializing /data/romain/tile 002.lif:
[testng] [2024-07-26 03:01:50,030] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y4.tif:
[testng] [2024-07-26 03:01:50,072] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y5.tif:
[testng] [2024-07-26 03:01:50,952] [pool-1-thread-3] Initializing /data/andrew/LIF Lambda/Lambda 1 file grab.bmp:
[testng] [2024-07-26 03:01:51,012] [pool-1-thread-10] Initializing /data/matthias/ms-first tests.lif:
[testng] [2024-07-26 03:01:51,252] [pool-1-thread-4] Initializing /data/matthias/directory_tree.jpg:
[testng] [2024-07-26 03:01:51,530] [pool-1-thread-1] Initializing /data/vytas/Experiment2.lif:
[testng] [2024-07-26 03:01:51,882] [pool-1-thread-11] Initializing /data/christophe/01_4C1Z.lif:
[testng] [2024-07-26 03:01:51,899] [pool-1-thread-4] Initializing /data/sebastian/sebHaase.lif:
[testng] [2024-07-26 03:01:52,136] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y1.tif:
[testng] [2024-07-26 03:01:52,185] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y2.tif:
[testng] [2024-07-26 03:01:52,468] [pool-1-thread-2] Initializing /data/tony/20070413FLIMtest.lif:
[testng] [2024-07-26 03:01:52,668] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y7.tif:
[testng] [2024-07-26 03:01:53,172] [pool-1-thread-2] Initializing /data/melissa/roi-test-0.tif:
[testng] [2024-07-26 03:01:53,244] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y0.tif:
[testng] [2024-07-26 03:01:53,294] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y0.tif:
[testng] [2024-07-26 03:01:53,674] [pool-1-thread-4] Initializing /data/jcb/JCB 201112145/Figure 5A.lif:
[testng] [2024-07-26 03:01:53,804] [pool-1-thread-10] Initializing /data/claude/4B.lif:
[testng] [2024-07-26 03:01:53,952] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y6.tif:
[testng] [2024-07-26 03:01:54,283] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y0.tif:
[testng] [2024-07-26 03:01:54,472] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y2.tif:
[testng] [2024-07-26 03:01:54,528] [pool-1-thread-2] Initializing /data/sebastian/sebHaase2.lif:
[testng] [2024-07-26 03:01:54,617] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y7.tif:
[testng] [2024-07-26 03:01:54,745] [pool-1-thread-4] Initializing /data/qa-10980/Day 2 Chitin Kan.lif:
[testng] [2024-07-26 03:01:55,006] [pool-1-thread-11] Initializing /data/stefan/p24b-v1240.lif:
[testng] [2024-07-26 03:01:55,227] [pool-1-thread-1] Initializing /data/martin/stack dapi-Alx568-reflectiveSnapshot All2.jpg:
[testng] [2024-07-26 03:01:55,410] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y3.tif:
[testng] [2024-07-26 03:01:55,572] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y9.tif:
[testng] [2024-07-26 03:01:55,679] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y9.tif:
[testng] [2024-07-26 03:01:55,715] [pool-1-thread-9] Initializing /data/jcb/201003021_Fig8B.lif:
[testng] [2024-07-26 03:01:56,316] [pool-1-thread-1] Initializing /data/fabrice/Clipboard.jpg:
[testng] [2024-07-26 03:01:56,345] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y6.tif:
[testng] [2024-07-26 03:01:56,571] [pool-1-thread-11] Initializing /data/fabrice/test 1.lif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 14098, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 minutes 19 seconds
Finished: SUCCESS