Started by upstream project "BIOFORMATS-test-repo" build number 20
originally caused by:
Started by upstream project "Trigger" build number 23
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins33545311391658863.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_2443_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:21:13,604 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:13,607 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 01:21:13,607 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:13,608 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:13,609 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:13,610 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:13,610 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:13,610 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:13,611 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:13,612 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:13,613 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:13,613 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:13,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:13,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:13,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:13,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:13,858 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:13,858 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:13,858 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:13,859 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:13,859 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 01:21:13,860 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 01:21:13,860 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 249 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-04-02 01:21:13,872] [main] java.version = 11.0.16
[testng] 01:21:13,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:13,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:13,943 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-02_01-21-13.log]
[testng] 01:21:13,944 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-04-02 01:21:13,947] [main] testng.directory = /data
[testng] [2024-04-02 01:21:13,947] [main] testng.configDirectory = /config
[testng] [2024-04-02 01:21:13,961] [main] testng.multiplier = 1.0
[testng] [2024-04-02 01:21:13,963] [main] testng.in-memory = false
[testng] [2024-04-02 01:21:13,964] [main] testng.allow-missing = false
[testng] [2024-04-02 01:21:13,964] [main] user.language = en
[testng] [2024-04-02 01:21:13,964] [main] user.country = ${user.country}
[testng] [2024-04-02 01:21:13,964] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-04-02 01:21:28,624] [main] ----------------------------------------
[testng] [2024-04-02 01:21:28,624] [main] Total files: 283
[testng] [2024-04-02 01:21:28,624] [main] Scan time: 14.66 s (51 ms/file)
[testng] [2024-04-02 01:21:28,624] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-04-02 01:29:52,222] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] 01:29:52,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:29:52,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:52,225 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-02_01-29-52.log]
[testng] 01:29:52,226 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18bdebb9 - End of configuration.
[testng] [2024-04-02 01:29:53,332] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] 01:29:53,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:29:53,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:53,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-02_01-29-53.log]
[testng] 01:29:53,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f565e69 - End of configuration.
[testng] [2024-04-02 01:29:53,440] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] 01:29:53,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:29:53,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:53,441 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-02_01-29-53.log]
[testng] 01:29:53,442 |-INFO in ch.qos.logback.core.sift.SiftProcessor@506c6c5a - End of configuration.
[testng] [2024-04-02 01:29:53,733] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] 01:29:53,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:29:53,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:53,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-02_01-29-53.log]
[testng] 01:29:53,734 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4eec2b06 - End of configuration.
[testng] [2024-04-02 01:29:53,851] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:29:53,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:29:53,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:53,851 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-02_01-29-53.log]
[testng] 01:29:53,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1025552f - End of configuration.
[testng] [2024-04-02 01:29:53,878] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:29:53,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:29:53,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:53,879 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-02_01-29-53.log]
[testng] 01:29:53,879 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28bea5a1 - End of configuration.
[testng] [2024-04-02 01:29:53,943] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] 01:29:53,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:29:53,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:53,944 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-02_01-29-53.log]
[testng] 01:29:53,944 |-INFO in ch.qos.logback.core.sift.SiftProcessor@514c43d1 - End of configuration.
[testng] [2024-04-02 01:29:54,128] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] 01:29:54,129 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:29:54,129 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:54,129 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-02_01-29-54.log]
[testng] 01:29:54,130 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b2793b9 - End of configuration.
[testng] [2024-04-02 01:29:54,204] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] 01:29:54,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:29:54,205 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:54,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-02_01-29-54.log]
[testng] 01:29:54,206 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cc05b9a - End of configuration.
[testng] [2024-04-02 01:29:54,279] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] 01:29:54,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:29:54,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:54,280 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-02_01-29-54.log]
[testng] 01:29:54,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ec76e36 - End of configuration.
[testng] [2024-04-02 01:29:57,062] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] 01:29:57,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:29:57,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:57,063 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-02_01-29-57.log]
[testng] 01:29:57,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a2e6908 - End of configuration.
[testng] [2024-04-02 01:29:57,149] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] 01:29:57,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:29:57,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:57,149 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-02_01-29-57.log]
[testng] 01:29:57,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@269bbeed - End of configuration.
[testng] [2024-04-02 01:30:00,418] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-04-02 01:30:00,495] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-04-02 01:30:00,573] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-04-02 01:30:00,721] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-04-02 01:30:00,895] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-04-02 01:30:01,075] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-04-02 01:30:01,326] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-04-02 01:30:01,605] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-04-02 01:30:02,131] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-04-02 01:30:02,859] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-04-02 01:30:03,288] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-04-02 01:30:04,380] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-04-02 01:30:04,916] [pool-1-thread-12] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-04-02 01:30:22,145] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-04-02 01:30:22,496] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-04-02 01:30:22,579] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-04-02 01:30:22,618] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-04-02 01:30:22,688] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-04-02 01:30:22,839] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-04-02 01:30:23,066] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-04-02 01:30:23,784] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-04-02 01:30:24,218] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-04-02 01:30:24,239] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-04-02 01:30:24,646] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-04-02 01:30:24,727] [pool-1-thread-5] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-04-02 01:30:26,123] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-04-02 01:30:26,341] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-04-02 01:30:26,545] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-04-02 01:30:31,893] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-04-02 01:30:31,959] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-04-02 01:30:32,096] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-04-02 01:30:32,708] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-04-02 01:30:33,071] [pool-1-thread-7] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-04-02 01:30:33,748] [pool-1-thread-8] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-04-02 01:30:33,863] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-04-02 01:30:33,988] [pool-1-thread-1] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-04-02 01:30:34,184] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-04-02 01:30:34,335] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-04-02 01:30:34,435] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-04-02 01:30:36,116] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-04-02 01:30:36,384] [pool-1-thread-6] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-04-02 01:30:37,093] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-04-02 01:30:37,237] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-04-02 01:30:39,598] [pool-1-thread-9] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-04-02 01:30:39,777] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-04-02 01:30:39,868] [pool-1-thread-3] Initializing /data/olympus/XYZt.oir:
[testng] [2024-04-02 01:30:41,262] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-04-02 01:30:42,539] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-04-02 01:30:43,236] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-04-02 01:30:43,351] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-04-02 01:30:43,504] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-04-02 01:30:43,776] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-04-02 01:30:43,867] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-04-02 01:30:44,297] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-04-02 01:30:45,119] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-04-02 01:30:45,345] [pool-1-thread-5] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-04-02 01:30:45,426] [pool-1-thread-8] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-04-02 01:30:45,556] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-04-02 01:30:46,438] [pool-1-thread-11] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-04-02 01:30:46,806] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-04-02 01:30:46,880] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-04-02 01:30:47,184] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-04-02 01:30:53,729] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-04-02 01:30:54,054] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-04-02 01:30:54,403] [pool-1-thread-6] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-04-02 01:30:54,829] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-04-02 01:30:54,971] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-04-02 01:30:55,169] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-04-02 01:30:55,435] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-04-02 01:30:55,519] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-04-02 01:30:56,007] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-04-02 01:30:56,372] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-04-02 01:30:56,729] [pool-1-thread-5] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-04-02 01:30:56,891] [pool-1-thread-3] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-04-02 01:30:56,935] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-04-02 01:30:57,844] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-04-02 01:30:58,005] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-04-02 01:30:58,342] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-04-02 01:31:01,460] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-04-02 01:31:01,515] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-04-02 01:31:01,814] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-04-02 01:31:02,394] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-04-02 01:31:10,892] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-04-02 01:31:11,194] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-04-02 01:31:11,242] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-04-02 01:31:11,782] [pool-1-thread-7] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-04-02 01:31:12,455] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-04-02 01:31:12,653] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir:
[testng] [2024-04-02 01:31:12,783] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-04-02 01:31:13,207] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-04-02 01:31:13,517] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-04-02 01:31:14,199] [pool-1-thread-5] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-04-02 01:31:15,082] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-04-02 01:31:15,578] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-04-02 01:31:15,787] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-04-02 01:31:15,833] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-04-02 01:31:15,900] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-04-02 01:31:17,926] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-04-02 01:31:18,196] [pool-1-thread-6] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-04-02 01:34:01,357] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-04-02 01:34:02,052] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-04-02 01:34:02,188] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-04-02 01:34:02,541] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-04-02 01:34:02,921] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-04-02 01:34:03,258] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-04-02 01:34:26,475] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-04-02 01:34:26,873] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-04-02 01:34:27,060] [pool-1-thread-7] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-04-02 01:34:27,207] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-04-02 01:34:27,706] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-04-02 01:34:28,857] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-04-02 01:34:29,469] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-04-02 01:34:29,855] [pool-1-thread-4] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-04-02 01:34:30,244] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-04-02 01:34:30,550] [pool-1-thread-5] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-04-02 01:34:30,819] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-04-02 01:34:31,632] [pool-1-thread-3] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-04-02 01:34:59,959] [pool-1-thread-9] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-04-02 01:35:00,480] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-04-02 01:35:00,938] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-04-02 01:35:01,031] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-04-02 01:35:02,171] [pool-1-thread-10] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-04-02 01:35:02,559] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-04-02 01:35:02,689] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-04-02 01:35:04,190] [pool-1-thread-2] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-04-02 01:35:04,353] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-04-02 01:35:04,825] [pool-1-thread-7] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-04-02 01:35:06,802] [pool-1-thread-5] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-04-02 01:35:07,102] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-04-02 01:35:07,420] [pool-1-thread-10] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-04-02 01:35:09,602] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-04-02 01:35:09,619] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-04-02 01:35:10,248] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-04-02 01:35:10,811] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-04-02 01:35:11,310] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-04-02 01:35:11,999] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-04-02 01:35:12,252] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-04-02 01:35:12,424] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-04-02 01:35:12,914] [pool-1-thread-2] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-04-02 01:35:13,470] [pool-1-thread-5] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-04-02 01:35:25,616] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-04-02 01:35:26,054] [pool-1-thread-7] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-04-02 01:35:26,387] [pool-1-thread-10] Initializing /data/qa-17335/1.oir:
[testng] [2024-04-02 01:35:26,955] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-04-02 01:35:27,571] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-04-02 01:35:28,080] [pool-1-thread-1] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-04-02 01:35:28,475] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-04-02 01:35:29,208] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-04-02 01:35:29,435] [pool-1-thread-7] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-04-02 01:35:30,612] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-04-02 01:35:30,842] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-04-02 01:35:31,293] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-04-02 01:35:31,650] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-04-02 01:35:31,747] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-04-02 01:35:31,845] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-04-02 01:35:32,359] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-04-02 01:35:32,436] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-04-02 01:35:33,125] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-04-02 01:35:33,590] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-04-02 01:35:33,652] [pool-1-thread-4] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-04-02 01:35:34,121] [pool-1-thread-2] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-04-02 01:35:34,756] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-04-02 01:35:35,284] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-04-02 01:35:35,662] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-04-02 01:35:36,389] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-04-02 01:35:36,645] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-04-02 01:35:36,974] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-04-02 01:35:37,601] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-04-02 01:35:38,068] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-04-02 01:35:38,401] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-04-02 01:36:21,978] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-04-02 01:36:22,066] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-04-02 01:36:22,450] [pool-1-thread-7] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-04-02 01:36:22,506] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 47 minutes 17 seconds
Finished: SUCCESS