Started by upstream project "BIOFORMATS-test-repo" build number 171 originally caused by: Started by upstream project "Trigger" build number 194 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins15964806475607701800.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_27045_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:21:06,453 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:06,455 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:21:06,455 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:06,456 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:06,457 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:06,457 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:06,458 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:06,458 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:06,458 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:06,459 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:06,459 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:06,460 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:06,725 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:06,725 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:06,758 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:06,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:06,769 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:06,769 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:06,769 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:06,770 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:06,770 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:21:06,771 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:21:06,771 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 313 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-03 01:21:06,783] [main] java.version = 11.0.16 [testng] 01:21:06,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:06,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,832 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-03_01-21-06.log] [testng] 01:21:06,834 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-09-03 01:21:06,837] [main] testng.directory = /data [testng] [2024-09-03 01:21:06,837] [main] testng.configDirectory = /config [testng] [2024-09-03 01:21:06,847] [main] testng.multiplier = 1.0 [testng] [2024-09-03 01:21:06,849] [main] testng.in-memory = false [testng] [2024-09-03 01:21:06,849] [main] testng.allow-missing = false [testng] [2024-09-03 01:21:06,849] [main] user.language = en [testng] [2024-09-03 01:21:06,849] [main] user.country = ${user.country} [testng] [2024-09-03 01:21:06,849] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-03 01:21:21,365] [main] ---------------------------------------- [testng] [2024-09-03 01:21:21,365] [main] Total files: 283 [testng] [2024-09-03 01:21:21,365] [main] Scan time: 14.516 s (51 ms/file) [testng] [2024-09-03 01:21:21,365] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-03 01:29:22,761] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] 01:29:22,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:29:22,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:22,764 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-03_01-29-22.log] [testng] 01:29:22,765 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fa3dd2d - End of configuration. [testng] [2024-09-03 01:29:22,825] [pool-1-thread-12] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] 01:29:22,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:29:22,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:22,826 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-03_01-29-22.log] [testng] 01:29:22,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@729c92e - End of configuration. [testng] [2024-09-03 01:29:22,902] [pool-1-thread-11] Initializing /data/qa-17331/Clipboard.tif: [testng] 01:29:22,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:29:22,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:22,904 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-03_01-29-22.log] [testng] 01:29:22,905 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79b73230 - End of configuration. [testng] [2024-09-03 01:29:22,951] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] 01:29:22,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:29:22,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:22,952 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-03_01-29-22.log] [testng] 01:29:22,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4525e437 - End of configuration. [testng] [2024-09-03 01:29:23,010] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 01:29:23,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:29:23,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:23,011 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-03_01-29-23.log] [testng] 01:29:23,012 |-INFO in ch.qos.logback.core.sift.SiftProcessor@95530 - End of configuration. [testng] [2024-09-03 01:29:23,073] [pool-1-thread-8] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] 01:29:23,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:29:23,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:23,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-03_01-29-23.log] [testng] 01:29:23,075 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33aba368 - End of configuration. [testng] [2024-09-03 01:29:23,134] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] 01:29:23,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:29:23,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:23,135 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-03_01-29-23.log] [testng] 01:29:23,135 |-INFO in ch.qos.logback.core.sift.SiftProcessor@501ed94f - End of configuration. [testng] [2024-09-03 01:29:23,376] [pool-1-thread-6] Initializing /data/qa-17270/stack1.oir: [testng] 01:29:23,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:29:23,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:23,377 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-03_01-29-23.log] [testng] 01:29:23,378 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2836dbd6 - End of configuration. [testng] [2024-09-03 01:29:24,736] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] 01:29:24,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:29:24,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:24,737 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-03_01-29-24.log] [testng] 01:29:24,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1876afda - End of configuration. [testng] [2024-09-03 01:29:24,999] [pool-1-thread-4] Initializing /data/qa-17335/1.oir: [testng] 01:29:24,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:29:24,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:25,001 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-03_01-29-25.log] [testng] 01:29:25,001 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c9b2384 - End of configuration. [testng] [2024-09-03 01:29:25,059] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] 01:29:25,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:29:25,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:25,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-03_01-29-25.log] [testng] 01:29:25,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50a7c57b - End of configuration. [testng] [2024-09-03 01:29:25,134] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] 01:29:25,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:29:25,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:25,135 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-03_01-29-25.log] [testng] 01:29:25,135 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e1559cc - End of configuration. [testng] [2024-09-03 01:29:27,379] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2024-09-03 01:29:27,461] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-09-03 01:29:29,310] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-09-03 01:29:29,347] [pool-1-thread-10] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-09-03 01:29:29,681] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-09-03 01:29:29,723] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-09-03 01:29:29,857] [pool-1-thread-12] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-09-03 01:29:30,016] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-09-03 01:29:30,439] [pool-1-thread-7] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] [2024-09-03 01:29:30,754] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-09-03 01:29:31,586] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-09-03 01:29:31,792] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2024-09-03 01:29:32,148] [pool-1-thread-8] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-09-03 01:29:32,443] [pool-1-thread-9] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-09-03 01:29:38,027] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2024-09-03 01:29:38,089] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-09-03 01:29:38,135] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-09-03 01:29:38,793] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-09-03 01:29:39,186] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-09-03 01:29:39,636] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-09-03 01:29:39,686] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-09-03 01:29:40,094] [pool-1-thread-12] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-09-03 01:29:40,203] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-09-03 01:29:40,680] [pool-1-thread-4] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-09-03 01:29:40,936] [pool-1-thread-1] Initializing /data/qa-17917/f10010.oir: [testng] [2024-09-03 01:30:08,043] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-09-03 01:30:08,216] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-09-03 01:30:08,342] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2024-09-03 01:30:08,778] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-09-03 01:30:09,283] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-09-03 01:30:10,858] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-09-03 01:30:11,000] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-09-03 01:30:11,479] [pool-1-thread-10] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2024-09-03 01:30:11,660] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-09-03 01:30:11,892] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-09-03 01:30:12,696] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-09-03 01:30:13,197] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-09-03 01:30:13,471] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-09-03 01:30:13,582] [pool-1-thread-10] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2024-09-03 01:30:13,654] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-09-03 01:30:13,939] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-09-03 01:30:14,851] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-09-03 01:30:15,164] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-09-03 01:30:15,254] [pool-1-thread-5] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-09-03 01:30:15,563] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-09-03 01:30:15,744] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-09-03 01:30:15,967] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-09-03 01:30:16,023] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-09-03 01:30:16,513] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-09-03 01:30:16,865] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-09-03 01:30:17,025] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-09-03 01:30:17,393] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-09-03 01:30:17,546] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-09-03 01:30:17,645] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-09-03 01:30:18,249] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-09-03 01:30:18,461] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-09-03 01:30:19,234] [pool-1-thread-12] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-09-03 01:30:19,740] [pool-1-thread-11] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-09-03 01:30:19,976] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2024-09-03 01:30:20,411] [pool-1-thread-5] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-09-03 01:30:20,983] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-09-03 01:30:21,489] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-09-03 01:30:21,734] [pool-1-thread-12] Initializing /data/qa-17919/f10187.oir: [testng] [2024-09-03 01:30:39,132] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-09-03 01:30:39,446] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-09-03 01:30:39,552] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-09-03 01:30:40,141] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-09-03 01:30:40,284] [pool-1-thread-6] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-09-03 01:30:59,982] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-09-03 01:31:00,499] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-09-03 01:31:00,563] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-09-03 01:31:00,747] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-09-03 01:31:01,109] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-09-03 01:31:01,652] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-09-03 01:31:01,745] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-09-03 01:31:02,088] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-09-03 01:31:02,402] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-09-03 01:31:02,486] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-09-03 01:31:02,789] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-09-03 01:31:03,047] [pool-1-thread-2] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-09-03 01:31:03,581] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-09-03 01:31:04,461] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-09-03 01:31:04,513] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: [testng] [2024-09-03 01:31:04,540] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-09-03 01:31:04,599] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-09-03 01:31:04,979] [pool-1-thread-9] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-09-03 01:31:05,095] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-09-03 01:31:09,679] [pool-1-thread-4] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2024-09-03 01:31:10,313] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-09-03 01:31:10,540] [pool-1-thread-5] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-09-03 01:32:57,328] [pool-1-thread-7] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-09-03 01:32:57,691] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-09-03 01:32:57,800] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-09-03 01:32:57,878] [pool-1-thread-9] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-09-03 01:32:59,035] [pool-1-thread-10] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-09-03 01:32:59,476] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-09-03 01:32:59,889] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2024-09-03 01:33:00,571] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-09-03 01:33:00,890] [pool-1-thread-7] Initializing /data/olympus/XYZt.oir: [testng] [2024-09-03 01:33:02,069] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-09-03 01:33:02,217] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-09-03 01:33:02,352] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-09-03 01:33:02,929] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-09-03 01:33:03,326] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-09-03 01:33:03,400] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-09-03 01:33:03,533] [pool-1-thread-10] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] [2024-09-03 01:33:04,156] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-09-03 01:33:04,450] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-09-03 01:33:04,911] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-09-03 01:33:05,133] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-09-03 01:33:05,687] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-09-03 01:33:05,860] [pool-1-thread-9] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-09-03 01:33:06,183] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-09-03 01:33:06,461] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-09-03 01:33:07,181] [pool-1-thread-9] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-09-03 01:33:07,392] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-09-03 01:33:09,769] [pool-1-thread-10] Initializing /data/qa-17270/image1.oir: [testng] [2024-09-03 01:33:09,932] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-09-03 01:33:10,114] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-09-03 01:33:11,260] [pool-1-thread-11] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-09-03 01:33:11,717] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-09-03 01:33:11,818] [pool-1-thread-10] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-09-03 01:33:12,000] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-09-03 01:33:12,335] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-09-03 01:33:13,037] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-09-03 01:33:14,340] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-09-03 01:33:14,487] [pool-1-thread-11] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-09-03 01:33:14,601] [pool-1-thread-7] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-09-03 01:33:14,657] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-09-03 01:33:15,708] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-09-03 01:33:15,754] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-09-03 01:33:15,992] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-09-03 01:33:16,537] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-09-03 01:33:17,250] [pool-1-thread-4] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-09-03 01:33:17,965] [pool-1-thread-11] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-09-03 01:33:18,949] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-09-03 01:33:19,096] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-09-03 01:33:19,137] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-09-03 01:33:19,310] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-09-03 01:33:19,889] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-09-03 01:33:21,058] [pool-1-thread-11] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-09-03 01:33:21,171] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2024-09-03 01:33:21,708] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-09-03 01:33:21,957] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-09-03 01:33:22,848] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-09-03 01:33:23,042] [pool-1-thread-11] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-09-03 01:33:23,706] [pool-1-thread-10] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-09-03 01:33:23,981] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-09-03 01:33:27,381] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-09-03 01:33:27,840] [pool-1-thread-4] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-09-03 01:33:28,192] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-09-03 01:33:28,369] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-09-03 01:33:31,758] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-09-03 01:33:32,162] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2024-09-03 01:33:33,653] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-09-03 01:33:33,720] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-09-03 01:33:34,927] [pool-1-thread-11] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-09-03 01:33:35,715] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-09-03 01:33:36,518] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-09-03 01:33:37,045] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-09-03 01:33:37,763] [pool-1-thread-4] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-09-03 01:33:37,896] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-09-03 01:33:38,510] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-09-03 01:33:39,413] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-09-03 01:33:39,699] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-09-03 01:33:40,489] [pool-1-thread-11] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-09-03 01:33:41,561] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-09-03 01:33:41,949] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-09-03 01:33:42,293] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-09-03 01:33:43,014] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-09-03 01:33:43,334] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-09-03 01:33:43,693] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-09-03 01:33:44,526] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-09-03 01:33:44,626] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 43 minutes 41 seconds Finished: SUCCESS