Started by upstream project "BIOFORMATS-test-repo" build number 171
originally caused by:
 Started by upstream project "Trigger" build number 194
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins11588156665463262253.sh
+ '[' bigtiff = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_27077_merge_ci -v /uod/idr/repos/curated/bigtiff:/data -v /uod/idr-scratch/merge-ci/curated/bigtiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:27:45,887 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:27:45,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:27:45,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:27:45,890 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:27:45,890 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:27:45,891 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:27:45,891 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:27:45,891 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:27:45,891 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:27:45,892 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:27:45,892 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:27:45,893 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:27:46,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:27:46,073 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:27:46,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:27:46,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:27:46,104 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:27:46,104 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:27:46,105 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:27:46,105 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:27:46,105 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:27:46,106 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:27:46,106 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 215 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-09-03 01:27:46,116] [main] java.version = 11.0.16
   [testng] 01:27:46,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:27:46,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:46,164 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-03_01-27-46.log]
   [testng] 01:27:46,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-09-03 01:27:46,168] [main] testng.directory = /data
   [testng] [2024-09-03 01:27:46,168] [main] testng.configDirectory = /config
   [testng] [2024-09-03 01:27:46,179] [main] testng.multiplier = 1.0
   [testng] [2024-09-03 01:27:46,180] [main] testng.in-memory = false
   [testng] [2024-09-03 01:27:46,180] [main] testng.allow-missing = false
   [testng] [2024-09-03 01:27:46,180] [main] user.language = en
   [testng] [2024-09-03 01:27:46,180] [main] user.country = ${user.country}
   [testng] [2024-09-03 01:27:46,180] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-09-03 01:27:46,831] [main] ----------------------------------------
   [testng] [2024-09-03 01:27:46,831] [main] Total files: 14
   [testng] [2024-09-03 01:27:46,831] [main] Scan time: 0.651 s (46 ms/file)
   [testng] [2024-09-03 01:27:46,832] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-09-03 01:27:55,814] [pool-1-thread-1] Initializing /data/carlsen/Olympics8-lzw.tif: 
   [testng] 01:27:55,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:27:55,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:55,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-03_01-27-55.log]
   [testng] 01:27:55,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33a35f61 - End of configuration.
   [testng] [2024-09-03 01:27:55,905] [pool-1-thread-12] Initializing /data/samples/Classic.tif: 
   [testng] 01:27:55,906 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:27:55,906 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:55,907 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-03_01-27-55.log]
   [testng] 01:27:55,907 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54d2b467 - End of configuration.
   [testng] [2024-09-03 01:27:55,931] [pool-1-thread-11] Initializing /data/samples/BigTIFFSubIFD8.tif: 
   [testng] 01:27:55,931 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:27:55,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:55,932 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-03_01-27-55.log]
   [testng] 01:27:55,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64e99f1a - End of configuration.
   [testng] [2024-09-03 01:27:55,958] [pool-1-thread-10] Initializing /data/samples/BigTIFFMotorola.tif: 
   [testng] 01:27:55,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:27:55,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:55,959 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-03_01-27-55.log]
   [testng] 01:27:55,959 |-INFO in ch.qos.logback.core.sift.SiftProcessor@112eb0d5 - End of configuration.
   [testng] [2024-09-03 01:27:55,979] [pool-1-thread-9] Initializing /data/samples/BigTIFFLong.tif: 
   [testng] 01:27:55,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:27:55,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:55,980 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-03_01-27-55.log]
   [testng] 01:27:55,981 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70304a64 - End of configuration.
   [testng] [2024-09-03 01:27:56,003] [pool-1-thread-8] Initializing /data/colin/7S59P8I1_F00000012.btf: 
   [testng] 01:27:56,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:27:56,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:56,005 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-03_01-27-56.log]
   [testng] 01:27:56,005 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9a181f7 - End of configuration.
   [testng] [2024-09-03 01:27:58,500] [pool-1-thread-7] Initializing /data/samples/BigTIFF.tif: 
   [testng] 01:27:58,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:27:58,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:58,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-03_01-27-58.log]
   [testng] 01:27:58,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52dbcbf - End of configuration.
   [testng] [2024-09-03 01:27:58,524] [pool-1-thread-6] Initializing /data/samples/BigTIFFLong8.tif: 
   [testng] 01:27:58,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:27:58,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:58,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-03_01-27-58.log]
   [testng] 01:27:58,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c64119c - End of configuration.
   [testng] [2024-09-03 01:27:58,548] [pool-1-thread-5] Initializing /data/samples/BigTIFFMotorolaLongStrips.tif: 
   [testng] 01:27:58,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:27:58,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:58,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-03_01-27-58.log]
   [testng] 01:27:58,549 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7869dff1 - End of configuration.
   [testng] [2024-09-03 01:27:58,571] [pool-1-thread-4] Initializing /data/carlsen/Olympics8.tif: 
   [testng] 01:27:58,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:27:58,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:58,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-03_01-27-58.log]
   [testng] 01:27:58,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79cd3161 - End of configuration.
   [testng] [2024-09-03 01:27:58,620] [pool-1-thread-3] Initializing /data/samples/BigTIFFSubIFD4.tif: 
   [testng] 01:27:58,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:27:58,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:58,621 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-03_01-27-58.log]
   [testng] 01:27:58,621 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6656d1f1 - End of configuration.
   [testng] [2024-09-03 01:27:58,644] [pool-1-thread-2] Initializing /data/samples/BigTIFFLong8Tiles.tif: 
   [testng] 01:27:58,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:27:58,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:27:58,645 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-03_01-27-58.log]
   [testng] 01:27:58,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c3bfebd - End of configuration.
   [testng] [2024-09-03 01:28:00,932] [pool-1-thread-11] Initializing /data/carlsen/Olympics8-raw.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 32 seconds
Finished: SUCCESS