Started by upstream project "BIOFORMATS-test-repo" build number 23
originally caused by:
Started by upstream project "Trigger" build number 26
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10
[BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins12091450966392680646.sh
+ '[' apng = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_2887_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:19:14,632 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:19:14,635 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 02:19:14,635 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:19:14,636 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:19:14,636 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:19:14,636 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:19:14,637 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:19:14,637 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:19:14,638 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:19:14,638 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:19:14,638 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:19:14,638 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:19:14,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:19:14,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:19:14,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:19:14,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:19:14,903 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:19:14,904 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:19:14,904 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:19:14,904 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:19:14,904 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 02:19:14,905 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 02:19:14,905 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 267 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-04-05 02:19:14,916] [main] java.version = 1.8.0_342
[testng] 02:19:14,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:19:14,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:14,967 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-05_02-19-14.log]
[testng] 02:19:14,969 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-04-05 02:19:14,971] [main] testng.directory = /data
[testng] [2024-04-05 02:19:14,971] [main] testng.configDirectory = /config
[testng] [2024-04-05 02:19:14,985] [main] testng.multiplier = 1.0
[testng] [2024-04-05 02:19:14,985] [main] testng.in-memory = false
[testng] [2024-04-05 02:19:14,986] [main] testng.allow-missing = false
[testng] [2024-04-05 02:19:14,986] [main] user.language = en
[testng] [2024-04-05 02:19:14,986] [main] user.country = ${user.country}
[testng] [2024-04-05 02:19:14,986] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-04-05 02:19:15,408] [main] ----------------------------------------
[testng] [2024-04-05 02:19:15,408] [main] Total files: 21
[testng] [2024-04-05 02:19:15,408] [main] Scan time: 0.422 s (20 ms/file)
[testng] [2024-04-05 02:19:15,408] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-04-05 02:19:16,730] [pool-1-thread-1] Initializing /data/samples/Sun.png:
[testng] 02:19:16,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:19:16,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-05_02-19-16.log]
[testng] 02:19:16,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@565686e0 - End of configuration.
[testng] [2024-04-05 02:19:16,802] [pool-1-thread-12] Initializing /data/samples/atom.png:
[testng] 02:19:16,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:19:16,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,804 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-05_02-19-16.log]
[testng] 02:19:16,805 |-INFO in ch.qos.logback.core.sift.SiftProcessor@630a9131 - End of configuration.
[testng] [2024-04-05 02:19:16,810] [pool-1-thread-11] Initializing /data/samples/orbit.png:
[testng] 02:19:16,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:19:16,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-05_02-19-16.log]
[testng] 02:19:16,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47a44a0 - End of configuration.
[testng] [2024-04-05 02:19:16,817] [pool-1-thread-10] Initializing /data/samples/monkey_apng.png:
[testng] 02:19:16,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:19:16,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-05_02-19-16.log]
[testng] 02:19:16,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43e02431 - End of configuration.
[testng] [2024-04-05 02:19:16,827] [pool-1-thread-9] Initializing /data/qa-7473/x.png:
[testng] 02:19:16,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:19:16,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,828 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-05_02-19-16.log]
[testng] 02:19:16,828 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e866581 - End of configuration.
[testng] [2024-04-05 02:19:16,833] [pool-1-thread-8] Initializing /data/samples/william_wong04.png:
[testng] 02:19:16,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:19:16,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-05_02-19-16.log]
[testng] 02:19:16,835 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56c6b33a - End of configuration.
[testng] [2024-04-05 02:19:16,842] [pool-1-thread-7] Initializing /data/samples/daniel_coltri_two.png:
[testng] 02:19:16,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:19:16,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,844 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-05_02-19-16.log]
[testng] 02:19:16,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@527c2cfc - End of configuration.
[testng] [2024-04-05 02:19:16,851] [pool-1-thread-6] Initializing /data/qa-7473/n.tif:
[testng] 02:19:16,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:19:16,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-05_02-19-16.log]
[testng] 02:19:16,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d626eb7 - End of configuration.
[testng] [2024-04-05 02:19:16,894] [pool-1-thread-5] Initializing /data/samples/MoonPhases.png:
[testng] 02:19:16,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:19:16,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-05_02-19-16.log]
[testng] 02:19:16,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4279d29d - End of configuration.
[testng] [2024-04-05 02:19:16,900] [pool-1-thread-4] Initializing /data/samples/joanna_viera01.png:
[testng] 02:19:16,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:19:16,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-05_02-19-16.log]
[testng] 02:19:16,902 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b5917c7 - End of configuration.
[testng] [2024-04-05 02:19:16,907] [pool-1-thread-3] Initializing /data/samples/Matrix.png:
[testng] 02:19:16,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:19:16,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,909 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-05_02-19-16.log]
[testng] 02:19:16,909 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a10c4ca - End of configuration.
[testng] [2024-04-05 02:19:16,915] [pool-1-thread-2] Initializing /data/samples/phug_logo.png:
[testng] 02:19:16,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:19:16,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:16,916 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-05_02-19-16.log]
[testng] 02:19:16,916 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56e95f54 - End of configuration.
[testng] [2024-04-05 02:19:18,498] [pool-1-thread-7] Initializing /data/samples/william_wong02.png:
[testng] [2024-04-05 02:19:18,506] [pool-1-thread-3] Initializing /data/samples/spinfox.png:
[testng] [2024-04-05 02:19:18,510] [pool-1-thread-12] Initializing /data/samples/william_wong01.png:
[testng] [2024-04-05 02:19:18,516] [pool-1-thread-2] Initializing /data/samples/william_wong05.png:
[testng] [2024-04-05 02:19:18,521] [pool-1-thread-8] Initializing /data/colin/test.sfstdge.png:
[testng] [2024-04-05 02:19:18,526] [pool-1-thread-11] Initializing /data/samples/daniel_coltri_one.png:
[testng] [2024-04-05 02:19:18,533] [pool-1-thread-1] Initializing /data/samples/PhugAnimation3.png:
[testng] [2024-04-05 02:19:18,538] [pool-1-thread-10] Initializing /data/samples/chompy2.png:
[testng] [2024-04-05 02:19:18,541] [pool-1-thread-5] Initializing /data/samples/StarV838.png:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 seconds
Finished: SUCCESS