Started by upstream project "BIOFORMATS-test-repo" build number 185
originally caused by:
Started by upstream project "Trigger" build number 207
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1465105174713023295.sh
+ '[' hitachi = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_29188_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 15:26:26,494 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 15:26:26,496 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 15:26:26,496 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 15:26:26,497 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 15:26:26,497 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 15:26:26,498 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 15:26:26,498 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 15:26:26,498 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 15:26:26,499 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 15:26:26,502 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 15:26:26,502 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 15:26:26,503 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 15:26:26,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 15:26:26,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 15:26:26,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 15:26:26,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 15:26:26,790 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 15:26:26,791 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 15:26:26,791 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 15:26:26,791 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 15:26:26,792 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 15:26:26,792 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 15:26:26,793 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 294 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-09-11 15:26:26,806] [main] java.version = 17.0.2
[testng] 15:26:26,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 15:26:26,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:26,870 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-11_15-26-26.log]
[testng] 15:26:26,873 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-09-11 15:26:26,877] [main] testng.directory = /data
[testng] [2024-09-11 15:26:26,878] [main] testng.configDirectory = /config
[testng] [2024-09-11 15:26:26,894] [main] testng.multiplier = 1.0
[testng] [2024-09-11 15:26:26,896] [main] testng.in-memory = false
[testng] [2024-09-11 15:26:26,896] [main] testng.allow-missing = false
[testng] [2024-09-11 15:26:26,896] [main] user.language = en
[testng] [2024-09-11 15:26:26,896] [main] user.country = ${user.country}
[testng] [2024-09-11 15:26:26,896] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-09-11 15:26:28,631] [main] ----------------------------------------
[testng] [2024-09-11 15:26:28,631] [main] Total files: 21
[testng] [2024-09-11 15:26:28,631] [main] Scan time: 1.735 s (82 ms/file)
[testng] [2024-09-11 15:26:28,631] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 18 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-09-11 15:26:31,441] [pool-1-thread-1] Initializing /data/stefan/001_q06.txt:
[testng] 15:26:31,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 15:26:31,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:31,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-11_15-26-31.log]
[testng] 15:26:31,443 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15e822c - End of configuration.
[testng] [2024-09-11 15:26:31,525] [pool-1-thread-12] Initializing /data/stefan/001_q01.txt:
[testng] 15:26:31,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 15:26:31,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:31,527 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-11_15-26-31.log]
[testng] 15:26:31,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f40fb7 - End of configuration.
[testng] [2024-09-11 15:26:31,581] [pool-1-thread-11] Initializing /data/stefan/001_q12.txt:
[testng] 15:26:31,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 15:26:31,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:31,583 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-11_15-26-31.log]
[testng] 15:26:31,583 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c2132bf - End of configuration.
[testng] [2024-09-11 15:26:31,740] [pool-1-thread-10] Initializing /data/stefan/001_q03.txt:
[testng] 15:26:31,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 15:26:31,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:31,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-11_15-26-31.log]
[testng] 15:26:31,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56aec5da - End of configuration.
[testng] [2024-09-11 15:26:31,887] [pool-1-thread-9] Initializing /data/stefan/001_q02.txt:
[testng] 15:26:31,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 15:26:31,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:31,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-11_15-26-31.log]
[testng] 15:26:31,888 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47a917f2 - End of configuration.
[testng] [2024-09-11 15:26:31,939] [pool-1-thread-8] Initializing /data/stefan/001_q17.txt:
[testng] 15:26:31,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 15:26:31,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:31,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-11_15-26-31.log]
[testng] 15:26:31,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3dbd5c72 - End of configuration.
[testng] [2024-09-11 15:26:32,050] [pool-1-thread-7] Initializing /data/stefan/001_q15.txt:
[testng] 15:26:32,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 15:26:32,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:32,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-11_15-26-32.log]
[testng] 15:26:32,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@268cf3d7 - End of configuration.
[testng] [2024-09-11 15:26:32,119] [pool-1-thread-6] Initializing /data/stefan/001_q11.txt:
[testng] 15:26:32,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 15:26:32,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:32,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-11_15-26-32.log]
[testng] 15:26:32,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36b54247 - End of configuration.
[testng] [2024-09-11 15:26:32,237] [pool-1-thread-5] Initializing /data/stefan/001_q08.txt:
[testng] 15:26:32,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 15:26:32,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:32,239 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-11_15-26-32.log]
[testng] 15:26:32,239 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51a92ca7 - End of configuration.
[testng] [2024-09-11 15:26:32,363] [pool-1-thread-4] Initializing /data/stefan/001_q14.txt:
[testng] 15:26:32,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 15:26:32,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:32,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-11_15-26-32.log]
[testng] 15:26:32,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@484f4469 - End of configuration.
[testng] [2024-09-11 15:26:32,438] [pool-1-thread-3] Initializing /data/stefan/001_q16.txt:
[testng] 15:26:32,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 15:26:32,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:32,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-11_15-26-32.log]
[testng] 15:26:32,439 |-INFO in ch.qos.logback.core.sift.SiftProcessor@480db1ec - End of configuration.
[testng] [2024-09-11 15:26:32,491] [pool-1-thread-2] Initializing /data/stefan/001_q13.txt:
[testng] 15:26:32,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 15:26:32,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:26:32,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-11_15-26-32.log]
[testng] 15:26:32,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19557c5 - End of configuration.
[testng] [2024-09-11 15:26:35,075] [pool-1-thread-2] Initializing /data/stefan/001_q07.txt:
[testng] [2024-09-11 15:26:35,330] [pool-1-thread-7] Initializing /data/stefan/001_q05.txt:
[testng] [2024-09-11 15:26:35,398] [pool-1-thread-9] Initializing /data/stefan/001_q10.txt:
[testng] [2024-09-11 15:26:35,579] [pool-1-thread-12] Initializing /data/stefan/001_q09.txt:
[testng] [2024-09-11 15:26:35,692] [pool-1-thread-10] Initializing /data/stefan/001_q04.txt:
[testng] [2024-09-11 15:26:35,788] [pool-1-thread-4] Initializing /data/stefan/001_q18.txt:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 954, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 15 seconds
Finished: SUCCESS