Started by upstream project "BIOFORMATS-test-repo" build number 185
originally caused by:
Started by upstream project "Trigger" build number 207
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins13022862777215671649.sh
+ '[' apng = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_29299_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 16:26:32,300 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 16:26:32,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 16:26:32,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 16:26:32,303 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 16:26:32,303 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 16:26:32,303 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 16:26:32,304 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 16:26:32,304 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 16:26:32,304 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 16:26:32,305 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 16:26:32,305 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 16:26:32,305 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 16:26:32,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 16:26:32,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 16:26:32,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 16:26:32,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 16:26:32,512 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 16:26:32,512 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 16:26:32,513 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 16:26:32,513 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 16:26:32,513 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 16:26:32,514 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 16:26:32,514 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 210 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-09-11 16:26:32,525] [main] java.version = 17.0.2
[testng] 16:26:32,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 16:26:32,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:32,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-11_16-26-32.log]
[testng] 16:26:32,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-09-11 16:26:32,575] [main] testng.directory = /data
[testng] [2024-09-11 16:26:32,575] [main] testng.configDirectory = /config
[testng] [2024-09-11 16:26:32,585] [main] testng.multiplier = 1.0
[testng] [2024-09-11 16:26:32,586] [main] testng.in-memory = false
[testng] [2024-09-11 16:26:32,586] [main] testng.allow-missing = false
[testng] [2024-09-11 16:26:32,586] [main] user.language = en
[testng] [2024-09-11 16:26:32,586] [main] user.country = ${user.country}
[testng] [2024-09-11 16:26:32,586] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-09-11 16:26:33,108] [main] ----------------------------------------
[testng] [2024-09-11 16:26:33,109] [main] Total files: 21
[testng] [2024-09-11 16:26:33,109] [main] Scan time: 0.522 s (24 ms/file)
[testng] [2024-09-11 16:26:33,110] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-09-11 16:26:34,129] [pool-1-thread-1] Initializing /data/samples/StarV838.png:
[testng] 16:26:34,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 16:26:34,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-11_16-26-34.log]
[testng] 16:26:34,131 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cd79e52 - End of configuration.
[testng] [2024-09-11 16:26:34,207] [pool-1-thread-12] Initializing /data/samples/MoonPhases.png:
[testng] 16:26:34,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 16:26:34,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,211 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-11_16-26-34.log]
[testng] 16:26:34,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@336f5edb - End of configuration.
[testng] [2024-09-11 16:26:34,221] [pool-1-thread-11] Initializing /data/samples/william_wong02.png:
[testng] 16:26:34,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 16:26:34,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-11_16-26-34.log]
[testng] 16:26:34,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42b852ae - End of configuration.
[testng] [2024-09-11 16:26:34,234] [pool-1-thread-10] Initializing /data/samples/joanna_viera01.png:
[testng] 16:26:34,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 16:26:34,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-11_16-26-34.log]
[testng] 16:26:34,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e134bd4 - End of configuration.
[testng] [2024-09-11 16:26:34,244] [pool-1-thread-9] Initializing /data/colin/test.sfstdge.png:
[testng] 16:26:34,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 16:26:34,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-11_16-26-34.log]
[testng] 16:26:34,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7eb51c3e - End of configuration.
[testng] [2024-09-11 16:26:34,254] [pool-1-thread-8] Initializing /data/samples/atom.png:
[testng] 16:26:34,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 16:26:34,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-11_16-26-34.log]
[testng] 16:26:34,256 |-INFO in ch.qos.logback.core.sift.SiftProcessor@336b86a7 - End of configuration.
[testng] [2024-09-11 16:26:34,265] [pool-1-thread-7] Initializing /data/samples/william_wong04.png:
[testng] 16:26:34,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 16:26:34,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,267 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-11_16-26-34.log]
[testng] 16:26:34,268 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75a6c039 - End of configuration.
[testng] [2024-09-11 16:26:34,275] [pool-1-thread-6] Initializing /data/qa-7473/n.tif:
[testng] 16:26:34,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 16:26:34,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-11_16-26-34.log]
[testng] 16:26:34,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61c670ec - End of configuration.
[testng] [2024-09-11 16:26:34,338] [pool-1-thread-5] Initializing /data/qa-7473/x.png:
[testng] 16:26:34,338 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 16:26:34,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,340 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-11_16-26-34.log]
[testng] 16:26:34,340 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b0f2a78 - End of configuration.
[testng] [2024-09-11 16:26:34,345] [pool-1-thread-4] Initializing /data/samples/william_wong05.png:
[testng] 16:26:34,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 16:26:34,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,347 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-11_16-26-34.log]
[testng] 16:26:34,347 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43459c43 - End of configuration.
[testng] [2024-09-11 16:26:34,360] [pool-1-thread-3] Initializing /data/samples/phug_logo.png:
[testng] 16:26:34,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 16:26:34,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,362 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-11_16-26-34.log]
[testng] 16:26:34,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59d487fe - End of configuration.
[testng] [2024-09-11 16:26:34,370] [pool-1-thread-2] Initializing /data/samples/spinfox.png:
[testng] 16:26:34,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 16:26:34,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:26:34,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-11_16-26-34.log]
[testng] 16:26:34,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765013f - End of configuration.
[testng] [2024-09-11 16:26:35,481] [pool-1-thread-5] Initializing /data/samples/chompy2.png:
[testng] [2024-09-11 16:26:35,488] [pool-1-thread-10] Initializing /data/samples/orbit.png:
[testng] [2024-09-11 16:26:35,495] [pool-1-thread-9] Initializing /data/samples/Sun.png:
[testng] [2024-09-11 16:26:35,505] [pool-1-thread-4] Initializing /data/samples/Matrix.png:
[testng] [2024-09-11 16:26:35,863] [pool-1-thread-7] Initializing /data/samples/monkey_apng.png:
[testng] [2024-09-11 16:26:35,870] [pool-1-thread-2] Initializing /data/samples/william_wong01.png:
[testng] [2024-09-11 16:26:35,876] [pool-1-thread-11] Initializing /data/samples/daniel_coltri_two.png:
[testng] [2024-09-11 16:26:35,880] [pool-1-thread-12] Initializing /data/samples/daniel_coltri_one.png:
[testng] [2024-09-11 16:26:35,888] [pool-1-thread-1] Initializing /data/samples/PhugAnimation3.png:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 7 seconds
Finished: SUCCESS