Started by upstream project "BIOFORMATS-test-repo" build number 187
originally caused by:
Started by upstream project "Trigger" build number 209
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins565686421282922948.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_29511_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:35:09,401 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:35:09,403 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:35:09,403 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:35:09,405 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:35:09,405 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:35:09,405 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:35:09,406 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:35:09,406 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:35:09,406 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:35:09,407 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:35:09,407 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:35:09,407 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:35:09,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:35:09,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:35:09,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:35:09,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:35:09,771 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:35:09,771 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:35:09,772 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:35:09,772 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:35:09,772 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:35:09,773 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:35:09,773 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 367 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-09-13 01:35:09,783] [main] java.version = 1.8.0_342
[testng] 01:35:09,787 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:35:09,787 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:35:09,840 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-13_01-35-09.log]
[testng] 01:35:09,842 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-09-13 01:35:09,844] [main] testng.directory = /data
[testng] [2024-09-13 01:35:09,844] [main] testng.configDirectory = /config
[testng] [2024-09-13 01:35:09,858] [main] testng.multiplier = 1.0
[testng] [2024-09-13 01:35:09,858] [main] testng.in-memory = false
[testng] [2024-09-13 01:35:09,858] [main] testng.allow-missing = false
[testng] [2024-09-13 01:35:09,858] [main] user.language = en
[testng] [2024-09-13 01:35:09,859] [main] user.country = ${user.country}
[testng] [2024-09-13 01:35:09,859] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-09-13 01:35:29,720] [main] ----------------------------------------
[testng] [2024-09-13 01:35:29,720] [main] Total files: 283
[testng] [2024-09-13 01:35:29,720] [main] Scan time: 19.861 s (70 ms/file)
[testng] [2024-09-13 01:35:29,720] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-09-13 01:49:07,795] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.oir:
[testng] 01:49:07,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:49:07,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:07,797 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-13_01-49-07.log]
[testng] 01:49:07,797 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68279fb - End of configuration.
[testng] [2024-09-13 01:49:08,006] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] 01:49:08,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:49:08,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:08,007 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-13_01-49-08.log]
[testng] 01:49:08,008 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69b56025 - End of configuration.
[testng] [2024-09-13 01:49:08,189] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] 01:49:08,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:49:08,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:08,190 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-13_01-49-08.log]
[testng] 01:49:08,191 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40881678 - End of configuration.
[testng] [2024-09-13 01:49:08,708] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] 01:49:08,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:49:08,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:08,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-13_01-49-08.log]
[testng] 01:49:08,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35c3506c - End of configuration.
[testng] [2024-09-13 01:49:08,836] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] 01:49:08,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:49:08,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:08,837 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-13_01-49-08.log]
[testng] 01:49:08,838 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f8deaed - End of configuration.
[testng] [2024-09-13 01:49:09,130] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] 01:49:09,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:49:09,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:09,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-13_01-49-09.log]
[testng] 01:49:09,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@531128e3 - End of configuration.
[testng] [2024-09-13 01:49:09,276] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] 01:49:09,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:49:09,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:09,277 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-13_01-49-09.log]
[testng] 01:49:09,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e20b044 - End of configuration.
[testng] [2024-09-13 01:49:14,247] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] 01:49:14,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:49:14,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:14,248 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-13_01-49-14.log]
[testng] 01:49:14,248 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76e65da4 - End of configuration.
[testng] [2024-09-13 01:49:14,513] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] 01:49:14,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:49:14,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:14,514 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-13_01-49-14.log]
[testng] 01:49:14,515 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61c237a9 - End of configuration.
[testng] [2024-09-13 01:49:14,647] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] 01:49:14,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:49:14,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:14,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-13_01-49-14.log]
[testng] 01:49:14,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@362e7f73 - End of configuration.
[testng] [2024-09-13 01:49:14,833] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] 01:49:14,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:49:14,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:14,834 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-13_01-49-14.log]
[testng] 01:49:14,834 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f4450e5 - End of configuration.
[testng] [2024-09-13 01:49:14,957] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] 01:49:14,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:49:14,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:49:14,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-13_01-49-14.log]
[testng] 01:49:14,959 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2263811f - End of configuration.
[testng] [2024-09-13 01:49:17,756] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-09-13 01:49:17,827] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-09-13 01:49:17,951] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-09-13 01:49:21,339] [pool-1-thread-8] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-09-13 01:50:02,779] [pool-1-thread-3] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-09-13 01:50:03,595] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-09-13 01:50:03,753] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-09-13 01:50:03,836] [pool-1-thread-4] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-09-13 01:50:04,053] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-09-13 01:50:04,996] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-09-13 01:50:05,563] [pool-1-thread-3] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-09-13 01:50:05,866] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-09-13 01:50:07,968] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-09-13 01:50:08,269] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-09-13 01:50:08,522] [pool-1-thread-5] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-09-13 01:50:09,049] [pool-1-thread-9] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-09-13 01:50:12,787] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-09-13 01:50:13,042] [pool-1-thread-3] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-09-13 01:50:13,309] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-09-13 01:50:14,199] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-09-13 01:50:19,791] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-09-13 01:50:20,595] [pool-1-thread-5] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-09-13 01:50:21,343] [pool-1-thread-1] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-09-13 01:50:25,169] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-09-13 01:50:25,366] [pool-1-thread-11] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-09-13 01:50:26,656] [pool-1-thread-5] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-09-13 01:50:40,880] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-09-13 01:50:41,639] [pool-1-thread-4] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-09-13 01:50:47,542] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-09-13 01:50:47,634] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-09-13 01:50:49,048] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-09-13 01:50:49,449] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-09-13 01:50:50,931] [pool-1-thread-10] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-09-13 01:50:51,181] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-09-13 01:50:51,531] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-09-13 01:50:52,979] [pool-1-thread-3] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-09-13 01:52:16,570] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-09-13 01:52:16,988] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-09-13 01:52:19,849] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-09-13 01:52:20,004] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-09-13 01:52:20,969] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-09-13 01:52:30,356] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-09-13 01:52:31,333] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-09-13 01:52:32,065] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-09-13 01:52:33,026] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-09-13 01:52:37,245] [pool-1-thread-9] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-09-13 01:52:37,741] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-09-13 01:52:38,325] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-09-13 01:52:39,402] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-09-13 01:52:43,797] [pool-1-thread-1] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-09-13 01:52:43,910] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir:
[testng] [2024-09-13 01:52:44,035] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-09-13 01:52:45,555] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-09-13 01:52:46,248] [pool-1-thread-9] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-09-13 01:52:47,011] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-09-13 01:52:48,013] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-09-13 01:52:50,170] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-09-13 01:52:50,787] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-09-13 01:52:52,310] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-09-13 01:52:52,620] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-09-13 01:52:53,824] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-09-13 01:52:54,336] [pool-1-thread-12] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] [2024-09-13 01:52:55,639] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-09-13 01:52:57,438] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-09-13 01:52:58,889] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-09-13 01:53:00,338] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-09-13 01:53:01,579] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-09-13 01:53:03,340] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-09-13 01:53:04,678] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-09-13 01:53:05,863] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-09-13 01:53:06,007] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-09-13 01:53:08,915] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-09-13 01:53:09,215] [pool-1-thread-12] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-09-13 01:53:10,439] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-09-13 01:53:11,509] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-09-13 01:53:11,656] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-09-13 01:53:12,070] [pool-1-thread-1] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-09-13 01:53:12,638] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-09-13 01:53:13,272] [pool-1-thread-6] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-09-13 01:53:13,510] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-09-13 01:53:13,783] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-09-13 01:53:14,369] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-09-13 01:53:14,866] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-09-13 01:53:14,985] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-09-13 01:53:17,326] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-09-13 01:53:18,473] [pool-1-thread-9] Initializing /data/qa-17335/1.oir:
[testng] [2024-09-13 01:53:18,567] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-09-13 01:53:19,485] [pool-1-thread-6] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-09-13 01:53:19,686] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-09-13 01:53:20,298] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-09-13 01:53:21,325] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-09-13 01:53:22,951] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-09-13 01:53:36,794] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-09-13 01:53:37,378] [pool-1-thread-6] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-09-13 01:53:38,451] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-09-13 01:53:38,788] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-09-13 01:53:39,531] [pool-1-thread-4] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-09-13 01:53:43,252] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-09-13 01:53:43,608] [pool-1-thread-6] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-09-13 01:55:05,036] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-09-13 01:55:05,111] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-09-13 01:55:06,491] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-09-13 01:55:06,610] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-09-13 01:55:06,689] [pool-1-thread-11] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-09-13 01:55:06,824] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-09-13 01:55:07,775] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-09-13 01:55:22,111] [pool-1-thread-7] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-09-13 01:55:22,452] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-09-13 01:55:22,589] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-09-13 01:55:23,942] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-09-13 01:55:24,282] [pool-1-thread-9] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-09-13 01:55:25,532] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-09-13 01:55:26,008] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-09-13 01:55:27,144] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-09-13 01:55:28,221] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-09-13 01:55:29,083] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-09-13 01:55:30,289] [pool-1-thread-7] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-09-13 01:55:31,816] [pool-1-thread-7] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-09-13 01:55:33,875] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-09-13 01:55:44,030] [pool-1-thread-11] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-09-13 01:55:44,598] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-09-13 01:55:46,201] [pool-1-thread-11] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-09-13 01:55:47,271] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-09-13 01:55:47,764] [pool-1-thread-9] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-09-13 01:55:55,000] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-09-13 01:55:55,494] [pool-1-thread-11] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-09-13 01:56:01,158] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-09-13 01:56:03,028] [pool-1-thread-4] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-09-13 01:56:08,329] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-09-13 01:56:10,300] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-09-13 01:56:12,155] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-09-13 01:56:13,826] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-09-13 01:56:15,400] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-09-13 01:56:16,234] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-09-13 01:56:18,386] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-09-13 01:56:20,047] [pool-1-thread-11] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-09-13 01:56:22,868] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-09-13 01:56:31,457] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-09-13 01:56:32,092] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-09-13 01:56:34,314] [pool-1-thread-5] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-09-13 01:56:36,173] [pool-1-thread-5] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-09-13 01:56:37,887] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-09-13 01:56:38,349] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-09-13 01:56:39,216] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-09-13 01:56:40,503] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-09-13 01:56:40,995] [pool-1-thread-5] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-09-13 01:56:42,872] [pool-1-thread-11] Initializing /data/olympus/XYZt.oir:
[testng] [2024-09-13 01:57:00,531] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-09-13 01:57:00,800] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-09-13 01:57:00,920] [pool-1-thread-9] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-09-13 01:57:01,087] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-09-13 01:57:07,735] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-09-13 01:57:08,130] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-09-13 01:57:08,860] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-09-13 01:57:10,481] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-09-13 01:57:10,605] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-09-13 01:57:11,223] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-09-13 01:57:12,763] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-09-13 01:57:13,746] [pool-1-thread-4] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-09-13 01:57:17,649] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-09-13 01:57:17,924] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-09-13 01:57:19,089] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-09-13 01:57:21,965] [pool-1-thread-12] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-09-13 01:57:22,403] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-09-13 01:57:23,704] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-09-13 01:57:24,913] [pool-1-thread-12] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-09-13 01:57:25,217] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-09-13 01:57:26,444] [pool-1-thread-12] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-09-13 01:58:25,782] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-09-13 01:58:31,264] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-09-13 01:59:02,546] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-09-13 01:59:04,182] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-09-13 01:59:05,517] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-09-13 01:59:06,715] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 72 minutes 2 seconds
Finished: SUCCESS