Started by upstream project "BIOFORMATS-test-repo" build number 190
originally caused by:
Started by upstream project "Trigger" build number 212
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins6982297371345105594.sh
+ '[' targa = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_30030_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:42:14,935 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:42:14,937 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:42:14,937 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:42:14,938 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:42:14,938 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:42:14,938 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:42:14,938 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:42:14,938 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:42:14,939 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:42:14,939 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:42:14,939 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:42:14,939 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:42:15,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:42:15,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:42:15,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:42:15,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:42:15,222 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:42:15,222 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:42:15,223 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:42:15,223 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:42:15,223 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:42:15,224 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:42:15,224 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 285 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-09-16 01:42:15,236] [main] java.version = 1.8.0_342
[testng] 01:42:15,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:42:15,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:15,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-16_01-42-15.log]
[testng] 01:42:15,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-09-16 01:42:15,303] [main] testng.directory = /data
[testng] [2024-09-16 01:42:15,304] [main] testng.configDirectory = /config
[testng] [2024-09-16 01:42:15,319] [main] testng.multiplier = 1.0
[testng] [2024-09-16 01:42:15,320] [main] testng.in-memory = false
[testng] [2024-09-16 01:42:15,320] [main] testng.allow-missing = false
[testng] [2024-09-16 01:42:15,320] [main] user.language = fr
[testng] [2024-09-16 01:42:15,320] [main] user.country = FR
[testng] [2024-09-16 01:42:15,320] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-09-16 01:42:15,940] [main] ----------------------------------------
[testng] [2024-09-16 01:42:15,941] [main] Total files: 21
[testng] [2024-09-16 01:42:15,941] [main] Scan time: 0.62 s (29 ms/file)
[testng] [2024-09-16 01:42:15,941] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-09-16 01:42:16,973] [pool-1-thread-1] Initializing /data/samples/CTC24.TGA:
[testng] 01:42:16,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:42:16,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:16,974 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-16_01-42-16.log]
[testng] 01:42:16,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4998155c - End of configuration.
[testng] [2024-09-16 01:42:16,994] [pool-1-thread-12] Initializing /data/samples/CTC16.TGA:
[testng] 01:42:16,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:42:16,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:16,995 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-16_01-42-16.log]
[testng] 01:42:16,995 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7297c7a0 - End of configuration.
[testng] [2024-09-16 01:42:17,038] [pool-1-thread-11] Initializing /data/samples/UTC16.TGA:
[testng] 01:42:17,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:42:17,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-16_01-42-17.log]
[testng] 01:42:17,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26bf7dc3 - End of configuration.
[testng] [2024-09-16 01:42:17,051] [pool-1-thread-10] Initializing /data/samples/XING_T16.TGA:
[testng] 01:42:17,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:42:17,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,052 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-16_01-42-17.log]
[testng] 01:42:17,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fab7a6a - End of configuration.
[testng] [2024-09-16 01:42:17,062] [pool-1-thread-9] Initializing /data/samples/FLAG_B16.TGA:
[testng] 01:42:17,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:42:17,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,063 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-16_01-42-17.log]
[testng] 01:42:17,063 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33526587 - End of configuration.
[testng] [2024-09-16 01:42:17,074] [pool-1-thread-8] Initializing /data/samples/FLAG_T32.TGA:
[testng] 01:42:17,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:42:17,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-16_01-42-17.log]
[testng] 01:42:17,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34ca757f - End of configuration.
[testng] [2024-09-16 01:42:17,086] [pool-1-thread-7] Initializing /data/samples/CCM8.TGA:
[testng] 01:42:17,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:42:17,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-16_01-42-17.log]
[testng] 01:42:17,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15dab0b3 - End of configuration.
[testng] [2024-09-16 01:42:17,097] [pool-1-thread-6] Initializing /data/samples/UBW8.TGA:
[testng] 01:42:17,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:42:17,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,097 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-16_01-42-17.log]
[testng] 01:42:17,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5249043a - End of configuration.
[testng] [2024-09-16 01:42:17,107] [pool-1-thread-5] Initializing /data/samples/XING_T24.TGA:
[testng] 01:42:17,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:42:17,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,108 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-16_01-42-17.log]
[testng] 01:42:17,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6188c4d3 - End of configuration.
[testng] [2024-09-16 01:42:17,120] [pool-1-thread-4] Initializing /data/samples/XING_T32.TGA:
[testng] 01:42:17,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:42:17,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,121 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-16_01-42-17.log]
[testng] 01:42:17,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3168b5ad - End of configuration.
[testng] [2024-09-16 01:42:17,132] [pool-1-thread-3] Initializing /data/samples/FLAG_T16.TGA:
[testng] 01:42:17,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:42:17,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-16_01-42-17.log]
[testng] 01:42:17,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@762b378b - End of configuration.
[testng] [2024-09-16 01:42:17,142] [pool-1-thread-2] Initializing /data/samples/UCM8.TGA:
[testng] 01:42:17,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:42:17,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:42:17,143 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-16_01-42-17.log]
[testng] 01:42:17,143 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62ea36d8 - End of configuration.
[testng] [2024-09-16 01:42:18,766] [pool-1-thread-3] Initializing /data/samples/FLAG_B32.TGA:
[testng] [2024-09-16 01:42:18,777] [pool-1-thread-4] Initializing /data/samples/CBW8.TGA:
[testng] [2024-09-16 01:42:18,787] [pool-1-thread-11] Initializing /data/samples/XING_B32.TGA:
[testng] [2024-09-16 01:42:18,803] [pool-1-thread-9] Initializing /data/samples/XING_B24.TGA:
[testng] [2024-09-16 01:42:18,814] [pool-1-thread-6] Initializing /data/samples/UTC32.TGA:
[testng] [2024-09-16 01:42:18,824] [pool-1-thread-2] Initializing /data/samples/UTC24.TGA:
[testng] [2024-09-16 01:42:18,835] [pool-1-thread-12] Initializing /data/samples/XING_B16.TGA:
[testng] [2024-09-16 01:42:18,847] [pool-1-thread-1] Initializing /data/samples/MARBLES.TGA:
[testng] [2024-09-16 01:42:18,869] [pool-1-thread-7] Initializing /data/samples/FLAG_B24.TGA:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 7 seconds
Finished: SUCCESS