Started by upstream project "BIOFORMATS-test-repo" build number 191
originally caused by:
Started by upstream project "Trigger" build number 213
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins18023653157292084557.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_30171_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:24:25,078 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:24:25,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 01:24:25,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:24:25,081 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:24:25,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:24:25,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:24:25,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:24:25,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:24:25,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:24:25,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:24:25,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:24:25,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:24:25,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:24:25,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:24:25,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:24:25,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:24:25,363 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:24:25,363 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:24:25,363 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:24:25,364 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:24:25,364 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 01:24:25,366 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 01:24:25,366 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 283 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-09-17 01:24:25,381] [main] java.version = 11.0.16
[testng] 01:24:25,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:24:25,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:25,453 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-17_01-24-25.log]
[testng] 01:24:25,456 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-09-17 01:24:25,460] [main] testng.directory = /data
[testng] [2024-09-17 01:24:25,461] [main] testng.configDirectory = /config
[testng] [2024-09-17 01:24:25,476] [main] testng.multiplier = 1.0
[testng] [2024-09-17 01:24:25,479] [main] testng.in-memory = false
[testng] [2024-09-17 01:24:25,479] [main] testng.allow-missing = false
[testng] [2024-09-17 01:24:25,479] [main] user.language = en
[testng] [2024-09-17 01:24:25,479] [main] user.country = ${user.country}
[testng] [2024-09-17 01:24:25,479] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-09-17 01:24:26,541] [main] ----------------------------------------
[testng] [2024-09-17 01:24:26,541] [main] Total files: 21
[testng] [2024-09-17 01:24:26,541] [main] Scan time: 1.062 s (50 ms/file)
[testng] [2024-09-17 01:24:26,541] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-09-17 01:24:28,742] [pool-1-thread-1] Initializing /data/venu/Kontrolle0011.lim:
[testng] 01:24:28,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:24:28,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:28,745 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-17_01-24-28.log]
[testng] 01:24:28,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4703efd9 - End of configuration.
[testng] [2024-09-17 01:24:28,820] [pool-1-thread-12] Initializing /data/venu/Kontrolle0017.lim:
[testng] 01:24:28,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:24:28,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:28,822 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-17_01-24-28.log]
[testng] 01:24:28,823 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23656e85 - End of configuration.
[testng] [2024-09-17 01:24:28,845] [pool-1-thread-11] Initializing /data/venu/Kontrolle0014.lim:
[testng] 01:24:28,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:24:28,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:28,846 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-17_01-24-28.log]
[testng] 01:24:28,847 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e55dd70 - End of configuration.
[testng] [2024-09-17 01:24:28,889] [pool-1-thread-10] Initializing /data/venu/Kontrolle0009.lim:
[testng] 01:24:28,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:24:28,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:28,890 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-17_01-24-28.log]
[testng] 01:24:28,891 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4487e9f1 - End of configuration.
[testng] [2024-09-17 01:24:28,919] [pool-1-thread-9] Initializing /data/venu/Kontrolle0012.lim:
[testng] 01:24:28,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:24:28,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:28,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-17_01-24-28.log]
[testng] 01:24:28,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c05358e - End of configuration.
[testng] [2024-09-17 01:24:28,947] [pool-1-thread-8] Initializing /data/venu/Kontrolle0021.lim:
[testng] 01:24:28,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:24:28,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:28,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-17_01-24-28.log]
[testng] 01:24:28,949 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14a45b62 - End of configuration.
[testng] [2024-09-17 01:24:28,980] [pool-1-thread-7] Initializing /data/venu/Kontrolle0015.lim:
[testng] 01:24:28,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:24:28,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:28,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-17_01-24-28.log]
[testng] 01:24:28,983 |-INFO in ch.qos.logback.core.sift.SiftProcessor@319c2aaf - End of configuration.
[testng] [2024-09-17 01:24:29,015] [pool-1-thread-6] Initializing /data/venu/Kontrolle0013.lim:
[testng] 01:24:29,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:24:29,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:29,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-17_01-24-29.log]
[testng] 01:24:29,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5144c452 - End of configuration.
[testng] [2024-09-17 01:24:29,047] [pool-1-thread-5] Initializing /data/venu/Kontrolle0007.lim:
[testng] 01:24:29,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:24:29,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:29,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-17_01-24-29.log]
[testng] 01:24:29,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3605d598 - End of configuration.
[testng] [2024-09-17 01:24:29,097] [pool-1-thread-4] Initializing /data/venu/Kontrolle0016.lim:
[testng] 01:24:29,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:24:29,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:29,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-17_01-24-29.log]
[testng] 01:24:29,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17f181b4 - End of configuration.
[testng] [2024-09-17 01:24:29,132] [pool-1-thread-3] Initializing /data/venu/Kontrolle0005.lim:
[testng] 01:24:29,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:24:29,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:29,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-17_01-24-29.log]
[testng] 01:24:29,134 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48d85d55 - End of configuration.
[testng] [2024-09-17 01:24:29,183] [pool-1-thread-2] Initializing /data/venu/Kontrolle0004.lim:
[testng] 01:24:29,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:24:29,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:29,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-17_01-24-29.log]
[testng] 01:24:29,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27983a5d - End of configuration.
[testng] [2024-09-17 01:24:32,310] [pool-1-thread-4] Initializing /data/venu/Kontrolle0002.lim:
[testng] [2024-09-17 01:24:32,344] [pool-1-thread-1] Initializing /data/venu/Kontrolle0019.lim:
[testng] [2024-09-17 01:24:32,379] [pool-1-thread-7] Initializing /data/venu/Kontrolle0020.lim:
[testng] [2024-09-17 01:24:32,441] [pool-1-thread-10] Initializing /data/venu/Kontrolle0010.lim:
[testng] [2024-09-17 01:24:32,503] [pool-1-thread-8] Initializing /data/venu/Kontrolle0003.lim:
[testng] [2024-09-17 01:24:32,628] [pool-1-thread-11] Initializing /data/venu/Kontrolle0018.lim:
[testng] [2024-09-17 01:24:32,773] [pool-1-thread-12] Initializing /data/venu/Kontrolle0008.lim:
[testng] [2024-09-17 01:24:32,908] [pool-1-thread-2] Initializing /data/venu/Kontrolle0001.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 13 seconds
Finished: SUCCESS