Started by upstream project "BIOFORMATS-test-repo" build number 194 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins10365169753946696336.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_30690_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 11:19:20,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 11:19:20,765 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 11:19:20,765 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 11:19:20,766 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 11:19:20,767 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 11:19:20,767 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 11:19:20,767 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 11:19:20,767 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 11:19:20,768 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 11:19:20,769 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 11:19:20,769 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 11:19:20,769 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 11:19:20,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 11:19:20,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 11:19:20,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 11:19:20,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 11:19:20,974 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 11:19:20,975 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 11:19:20,975 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 11:19:20,975 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 11:19:20,975 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 11:19:20,976 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 11:19:20,976 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 208 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-19 11:19:20,986] [main] java.version = 21 [testng] 11:19:20,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 11:19:20,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:19:21,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-19_11-19-21.log] [testng] 11:19:21,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-09-19 11:19:21,041] [main] testng.directory = /data [testng] [2024-09-19 11:19:21,041] [main] testng.configDirectory = /config [testng] [2024-09-19 11:19:21,051] [main] testng.multiplier = 1.0 [testng] [2024-09-19 11:19:21,052] [main] testng.in-memory = false [testng] [2024-09-19 11:19:21,052] [main] testng.allow-missing = false [testng] [2024-09-19 11:19:21,052] [main] user.language = en [testng] [2024-09-19 11:19:21,052] [main] user.country = ${user.country} [testng] [2024-09-19 11:19:21,052] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-19 11:19:45,197] [main] ---------------------------------------- [testng] [2024-09-19 11:19:45,197] [main] Total files: 259 [testng] [2024-09-19 11:19:45,197] [main] Scan time: 24.145 s (93 ms/file) [testng] [2024-09-19 11:19:45,198] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-19 11:29:55,595] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] 11:29:55,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 11:29:55,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:55,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-19_11-29-55.log] [testng] 11:29:55,600 |-INFO in ch.qos.logback.core.sift.SiftProcessor@118d9e78 - End of configuration. [testng] [2024-09-19 11:29:55,669] [pool-1-thread-12] Initializing /data/brian/FLIP.oib: [testng] 11:29:55,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 11:29:55,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:55,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-19_11-29-55.log] [testng] 11:29:55,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dc24ef9 - End of configuration. [testng] [2024-09-19 11:29:56,149] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] 11:29:56,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 11:29:56,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:56,150 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-19_11-29-56.log] [testng] 11:29:56,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37cc862c - End of configuration. [testng] [2024-09-19 11:29:56,417] [pool-1-thread-10] Initializing /data/yoshihito/XY.oif: [testng] 11:29:56,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 11:29:56,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:56,418 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-19_11-29-56.log] [testng] 11:29:56,419 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1286aed8 - End of configuration. [testng] [2024-09-19 11:29:56,672] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif: [testng] 11:29:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 11:29:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:56,673 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-19_11-29-56.log] [testng] 11:29:56,674 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2084c319 - End of configuration. [testng] [2024-09-19 11:29:56,998] [pool-1-thread-8] Initializing /data/johannes/Image0006/Image0006.oif: [testng] 11:29:56,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 11:29:56,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:56,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-19_11-29-56.log] [testng] 11:29:57,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@145564dc - End of configuration. [testng] [2024-09-19 11:29:57,441] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] 11:29:57,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 11:29:57,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:57,442 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-19_11-29-57.log] [testng] 11:29:57,443 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b507987 - End of configuration. [testng] [2024-09-19 11:29:57,733] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] 11:29:57,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 11:29:57,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:57,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-19_11-29-57.log] [testng] 11:29:57,734 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15755609 - End of configuration. [testng] [2024-09-19 11:29:58,346] [pool-1-thread-5] Initializing /data/brian/PA-GFPv-2.oib: [testng] 11:29:58,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 11:29:58,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:58,347 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-19_11-29-58.log] [testng] 11:29:58,348 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bf40750 - End of configuration. [testng] [2024-09-19 11:29:59,066] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] 11:29:59,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 11:29:59,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:59,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-19_11-29-59.log] [testng] 11:29:59,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30eed605 - End of configuration. [testng] [2024-09-19 11:29:59,525] [pool-1-thread-3] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 11:29:59,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 11:29:59,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:29:59,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-19_11-29-59.log] [testng] 11:29:59,526 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2103e842 - End of configuration. [testng] [2024-09-19 11:30:00,039] [pool-1-thread-2] Initializing /data/brian/PA-GFP-3.oib: [testng] 11:30:00,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 11:30:00,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:30:00,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-19_11-30-00.log] [testng] 11:30:00,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1433bc89 - End of configuration. [testng] [2024-09-19 11:30:03,409] [pool-1-thread-1] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-09-19 11:30:04,582] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-09-19 11:30:05,311] [pool-1-thread-11] Initializing /data/glen/singlesimul.oib: [testng] [2024-09-19 11:30:05,839] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-09-19 11:30:06,549] [pool-1-thread-6] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-09-19 11:30:08,099] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-09-19 11:30:08,663] [pool-1-thread-3] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-09-19 11:30:09,075] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-09-19 11:30:10,371] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-09-19 11:30:12,859] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-09-19 11:30:13,440] [pool-1-thread-1] Initializing /data/yasunori/series_1.oib: [testng] [2024-09-19 11:30:14,587] [pool-1-thread-11] Initializing /data/glen/Null file/test change.oif: [testng] [2024-09-19 11:30:15,378] [pool-1-thread-5] Initializing /data/glen/singleseqline.oib: [testng] [2024-09-19 11:30:15,977] [pool-1-thread-3] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-09-19 11:30:16,798] [pool-1-thread-2] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-09-19 11:30:19,299] [pool-1-thread-7] Initializing /data/david/Image0016.oif: [testng] [2024-09-19 11:30:22,516] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-09-19 11:30:23,456] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oif: [testng] [2024-09-19 11:30:26,362] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2024-09-19 11:30:26,883] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-09-19 11:30:28,001] [pool-1-thread-3] Initializing /data/tom/RGB-1.avi: [testng] [2024-09-19 11:30:30,479] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oib: [testng] [2024-09-19 11:30:31,387] [pool-1-thread-3] Initializing /data/glen/4205basal106072.oif: [testng] [2024-09-19 11:30:35,231] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-09-19 11:30:35,987] [pool-1-thread-5] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-09-19 11:30:37,842] [pool-1-thread-9] Initializing /data/simon/used_to_work.oib: [testng] [2024-09-19 11:30:39,458] [pool-1-thread-12] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-09-19 11:30:41,762] [pool-1-thread-1] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-09-19 11:30:42,628] [pool-1-thread-4] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-09-19 11:30:43,274] [pool-1-thread-9] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-09-19 11:30:43,400] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-09-19 11:30:44,523] [pool-1-thread-12] Initializing /data/monica/Image0056.oif: [testng] [2024-09-19 11:30:45,426] [pool-1-thread-11] Initializing /data/glen/singlesimul.oif: [testng] [2024-09-19 11:30:46,458] [pool-1-thread-9] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-09-19 11:30:48,804] [pool-1-thread-4] Initializing /data/glen/Image0002.oif: [testng] [2024-09-19 11:30:51,955] [pool-1-thread-2] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-09-19 11:31:42,716] [pool-1-thread-9] Initializing /data/johannes/step4b.bmp: [testng] [2024-09-19 11:31:44,842] [pool-1-thread-9] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-09-19 11:31:47,487] [pool-1-thread-7] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-09-19 11:31:48,984] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-09-19 11:31:49,947] [pool-1-thread-9] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-09-19 11:31:51,083] [pool-1-thread-7] Initializing /data/simon/never_worked.oib: [testng] [2024-09-19 11:31:53,943] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-09-19 11:31:54,515] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-09-19 11:31:56,079] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-09-19 11:32:00,055] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] [2024-09-19 11:32:09,541] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2024-09-19 11:32:10,837] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-09-19 11:32:11,291] [pool-1-thread-11] Initializing /data/molly/11OCT6.OIF: [testng] [2024-09-19 11:32:23,353] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-09-19 11:32:24,484] [pool-1-thread-12] Initializing /data/johannes/step5b.bmp: [testng] [2024-09-19 11:32:26,391] [pool-1-thread-12] Initializing /data/pedro/plv-test.oib: [testng] [2024-09-19 11:32:28,380] [pool-1-thread-9] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-09-19 11:32:30,497] [pool-1-thread-12] Initializing /data/david/Image0016.oib: [testng] [2024-09-19 11:32:32,680] [pool-1-thread-9] Initializing /data/tom/zseries-test.oib: [testng] [2024-09-19 11:32:35,227] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-09-19 11:32:36,463] [pool-1-thread-12] Initializing /data/karl/Image0009.oib: [testng] [2024-09-19 11:32:39,332] [pool-1-thread-12] Initializing /data/molly/11OCT3.OIF: [testng] [2024-09-19 11:33:18,786] [pool-1-thread-9] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-09-19 11:33:22,966] [pool-1-thread-9] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-09-19 11:34:45,689] [pool-1-thread-8] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-09-19 11:38:16,714] [pool-1-thread-8] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-09-19 11:38:21,301] [pool-1-thread-8] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-09-19 11:38:25,572] [pool-1-thread-8] Initializing /data/molly/11OCT5.OIF: [testng] [2024-09-19 11:38:58,175] [pool-1-thread-6] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-09-19 11:39:02,939] [pool-1-thread-6] Initializing /data/aryeh/control_test.oib: [testng] [2024-09-19 11:39:24,342] [pool-1-thread-6] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-09-19 11:42:12,620] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-09-19 11:42:15,308] [pool-1-thread-5] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-09-19 11:42:20,413] [pool-1-thread-5] Initializing /data/kay/IM2pg.oib: [testng] [2024-09-19 11:42:24,272] [pool-1-thread-5] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-09-19 11:42:27,681] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-09-19 11:42:33,550] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-09-19 11:42:36,713] [pool-1-thread-5] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-09-19 11:42:39,957] [pool-1-thread-5] Initializing /data/brian/lambda02nm.oib: [testng] [2024-09-19 11:42:44,056] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-09-19 11:42:47,941] [pool-1-thread-5] Initializing /data/molly/11OCT10.OIF: [testng] [2024-09-19 11:44:36,195] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-09-19 11:44:40,455] [pool-1-thread-4] Initializing /data/sten/01.oib: [testng] [2024-09-19 11:44:45,858] [pool-1-thread-4] Initializing /data/aryeh/1h.oib: [testng] [2024-09-19 11:44:52,752] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-09-19 11:44:57,437] [pool-1-thread-4] Initializing /data/christian/20min.oif: [testng] [2024-09-19 11:45:17,803] [pool-1-thread-4] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-09-19 11:45:24,220] [pool-1-thread-4] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-09-19 11:45:31,177] [pool-1-thread-4] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-09-19 11:45:35,894] [pool-1-thread-4] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-09-19 11:45:44,136] [pool-1-thread-4] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-09-19 11:46:20,035] [pool-1-thread-9] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-09-19 11:46:22,535] [pool-1-thread-4] Initializing /data/molly/11OCT11.OIF: [testng] [2024-09-19 11:46:57,005] [pool-1-thread-9] Initializing /data/molly/11OCT2.OIF: [testng] [2024-09-19 11:49:18,422] [pool-1-thread-6] Initializing /data/molly/11OCT9.OIF: [testng] [2024-09-19 11:50:27,154] [pool-1-thread-7] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-09-19 11:51:56,616] [pool-1-thread-7] Initializing /data/glen/111407.oif: [testng] [2024-09-19 11:54:14,660] [pool-1-thread-3] Initializing /data/marc/V0606J.oib: [testng] [2024-09-19 11:54:30,845] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-09-19 11:54:32,366] [pool-1-thread-10] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-09-19 11:54:36,538] [pool-1-thread-3] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-09-19 11:55:01,094] [pool-1-thread-11] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-09-19 11:55:12,797] [pool-1-thread-10] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-09-19 11:57:12,496] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-09-19 11:57:16,821] [pool-1-thread-11] Initializing /data/johannes/step1.bmp: [testng] [2024-09-19 11:57:19,114] [pool-1-thread-11] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-09-19 11:57:23,586] [pool-1-thread-11] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-09-19 11:57:52,770] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-09-19 11:57:57,520] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-09-19 11:57:58,699] [pool-1-thread-11] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-09-19 11:58:02,491] [pool-1-thread-3] Initializing /data/molly/11OCT8.OIF: [testng] [2024-09-19 11:58:14,874] [pool-1-thread-11] Initializing /data/glen/notsaturated.oif: [testng] [2024-09-19 11:59:18,836] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-09-19 11:59:27,486] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-09-19 11:59:36,996] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-09-19 12:00:12,480] [pool-1-thread-1] Initializing /data/johannes/step4.bmp: [testng] [2024-09-19 12:00:15,091] [pool-1-thread-1] Initializing /data/brian/Kaede15.oib: [testng] [2024-09-19 12:00:20,866] [pool-1-thread-1] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-09-19 12:10:08,601] [pool-1-thread-11] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-09-19 12:10:09,908] [pool-1-thread-7] Initializing /data/marc/V0606L.oib: [testng] [2024-09-19 12:10:18,543] [pool-1-thread-11] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-09-19 12:10:36,244] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-09-19 12:10:40,643] [pool-1-thread-7] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-09-19 12:10:46,287] [pool-1-thread-7] Initializing /data/johannes/step3.bmp: [testng] [2024-09-19 12:10:48,612] [pool-1-thread-7] Initializing /data/glen/seqlinestack.oib: [testng] [2024-09-19 12:10:54,631] [pool-1-thread-7] Initializing /data/glen/simulstack.oif: [testng] [2024-09-19 12:12:31,151] [pool-1-thread-1] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-09-19 12:12:39,526] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-09-19 12:12:48,572] [pool-1-thread-1] Initializing /data/molly/11OCT7.OIF: [testng] [2024-09-19 12:17:16,667] [pool-1-thread-4] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-09-19 12:17:23,915] [pool-1-thread-4] Initializing /data/allan/62909#1.oib: [testng] [2024-09-19 12:17:30,102] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-09-19 12:17:40,051] [pool-1-thread-4] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-09-19 12:18:10,597] [pool-1-thread-5] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-09-19 12:18:15,759] [pool-1-thread-4] Initializing /data/chris/missegragation-15.oib: [testng] [2024-09-19 12:18:20,047] [pool-1-thread-4] Initializing /data/jae/Image0001.oib: [testng] 12:54:25,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:54:25,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:54:25,905 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-19_12-54-25.log] [testng] 12:54:25,905 |-INFO in ch.qos.logback.core.sift.SiftProcessor@556140bc - End of configuration. [testng] 13:11:43,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 13:11:43,663 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:11:43,664 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-19_13-11-43.log] [testng] 13:11:43,664 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c642103 - End of configuration. [testng] 13:14:17,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 13:14:17,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:14:17,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-19_13-14-17.log] [testng] 13:14:17,834 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b193c44 - End of configuration. [testng] 13:25:42,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 13:25:42,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:25:42,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-19_13-25-42.log] [testng] 13:25:42,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c7eb2a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 126 minutes 25 seconds Finished: SUCCESS