Started by upstream project "BIOFORMATS-test-repo" build number 3
originally caused by:
Started by upstream project "Trigger" build number 4
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins10362347018700102716.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_309_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 00:20:18,162 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:20:18,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 00:20:18,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:18,165 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:18,165 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:20:18,166 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:20:18,166 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:20:18,166 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:18,167 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:18,167 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:20:18,168 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:20:18,168 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:20:18,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:20:18,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:20:18,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:20:18,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:20:18,391 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:20:18,391 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:20:18,391 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:20:18,391 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:20:18,391 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 00:20:18,392 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 00:20:18,392 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 225 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-16 00:20:18,402] [main] java.version = 11.0.16
[testng] 00:20:18,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:20:18,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:18,454 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-16_00-20-18.log]
[testng] 00:20:18,456 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-03-16 00:20:18,459] [main] testng.directory = /data
[testng] [2024-03-16 00:20:18,459] [main] testng.configDirectory = /config
[testng] [2024-03-16 00:20:18,471] [main] testng.multiplier = 1.0
[testng] [2024-03-16 00:20:18,472] [main] testng.in-memory = false
[testng] [2024-03-16 00:20:18,472] [main] testng.allow-missing = false
[testng] [2024-03-16 00:20:18,472] [main] user.language = en
[testng] [2024-03-16 00:20:18,472] [main] user.country = ${user.country}
[testng] [2024-03-16 00:20:18,473] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-03-16 00:20:36,458] [main] ----------------------------------------
[testng] [2024-03-16 00:20:36,458] [main] Total files: 283
[testng] [2024-03-16 00:20:36,458] [main] Scan time: 17.984 s (63 ms/file)
[testng] [2024-03-16 00:20:36,458] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-16 00:29:32,864] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] 00:29:32,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:29:32,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:32,869 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-16_00-29-32.log]
[testng] 00:29:32,869 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c978794 - End of configuration.
[testng] [2024-03-16 00:29:33,514] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] 00:29:33,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:29:33,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:33,514 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-16_00-29-33.log]
[testng] 00:29:33,515 |-INFO in ch.qos.logback.core.sift.SiftProcessor@118d0a27 - End of configuration.
[testng] [2024-03-16 00:29:33,686] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] 00:29:33,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:29:33,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:33,687 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-16_00-29-33.log]
[testng] 00:29:33,687 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c3996c - End of configuration.
[testng] [2024-03-16 00:29:33,896] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] 00:29:33,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:29:33,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:33,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-16_00-29-33.log]
[testng] 00:29:33,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a58ea7f - End of configuration.
[testng] [2024-03-16 00:29:34,001] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 00:29:34,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:29:34,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:34,002 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-16_00-29-34.log]
[testng] 00:29:34,002 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26e5ce32 - End of configuration.
[testng] [2024-03-16 00:29:34,037] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 00:29:34,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:29:34,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:34,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-16_00-29-34.log]
[testng] 00:29:34,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e4c768e - End of configuration.
[testng] [2024-03-16 00:29:34,110] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] 00:29:34,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:29:34,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:34,111 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-16_00-29-34.log]
[testng] 00:29:34,111 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76685505 - End of configuration.
[testng] [2024-03-16 00:29:34,324] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] 00:29:34,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:29:34,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:34,325 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-16_00-29-34.log]
[testng] 00:29:34,325 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fadbd85 - End of configuration.
[testng] [2024-03-16 00:29:34,423] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] 00:29:34,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:29:34,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:34,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-16_00-29-34.log]
[testng] 00:29:34,425 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5efc737e - End of configuration.
[testng] [2024-03-16 00:29:34,502] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] 00:29:34,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:29:34,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:34,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-16_00-29-34.log]
[testng] 00:29:34,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cb8d582 - End of configuration.
[testng] [2024-03-16 00:29:37,164] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] 00:29:37,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:29:37,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:37,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-16_00-29-37.log]
[testng] 00:29:37,166 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4255dea5 - End of configuration.
[testng] [2024-03-16 00:29:37,272] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] 00:29:37,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:29:37,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:37,273 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-16_00-29-37.log]
[testng] 00:29:37,274 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f726a01 - End of configuration.
[testng] [2024-03-16 00:29:40,771] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-03-16 00:29:40,860] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-03-16 00:29:41,577] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-03-16 00:29:41,821] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-03-16 00:29:42,018] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-03-16 00:29:42,307] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-03-16 00:29:42,474] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-03-16 00:29:42,564] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-03-16 00:29:42,732] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-03-16 00:29:43,502] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-03-16 00:29:43,868] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-03-16 00:29:45,050] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-03-16 00:29:45,389] [pool-1-thread-11] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-03-16 00:30:01,512] [pool-1-thread-5] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-03-16 00:30:01,856] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-03-16 00:30:02,053] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-03-16 00:30:02,151] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-03-16 00:30:02,247] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-03-16 00:30:02,554] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-03-16 00:30:02,857] [pool-1-thread-9] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-03-16 00:30:03,728] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-03-16 00:30:04,864] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-03-16 00:30:04,929] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-03-16 00:30:05,697] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-03-16 00:30:05,893] [pool-1-thread-10] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-03-16 00:30:07,286] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-03-16 00:30:07,419] [pool-1-thread-7] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-03-16 00:30:12,660] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-03-16 00:30:13,613] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-03-16 00:30:14,324] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-03-16 00:30:14,933] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-03-16 00:30:15,314] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-03-16 00:30:16,178] [pool-1-thread-12] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-03-16 00:30:17,233] [pool-1-thread-8] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-03-16 00:30:17,803] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-03-16 00:30:18,079] [pool-1-thread-6] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-03-16 00:30:18,387] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-03-16 00:30:18,544] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-03-16 00:30:20,019] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-03-16 00:30:20,388] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-03-16 00:30:20,661] [pool-1-thread-3] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-03-16 00:30:21,094] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-03-16 00:30:21,806] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-03-16 00:30:24,390] [pool-1-thread-5] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-03-16 00:30:25,495] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-03-16 00:30:26,559] [pool-1-thread-6] Initializing /data/olympus/XYZt.oir:
[testng] [2024-03-16 00:30:27,985] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-03-16 00:30:28,972] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-03-16 00:30:29,374] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-03-16 00:30:29,965] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-03-16 00:30:31,690] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-03-16 00:30:32,125] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-03-16 00:30:33,879] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-03-16 00:30:34,683] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-03-16 00:30:35,333] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-03-16 00:30:35,680] [pool-1-thread-2] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-03-16 00:30:36,125] [pool-1-thread-5] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-03-16 00:30:37,582] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-03-16 00:30:37,931] [pool-1-thread-10] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-03-16 00:30:39,296] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-03-16 00:30:39,535] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-03-16 00:30:40,481] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-03-16 00:30:44,191] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-03-16 00:30:44,498] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-03-16 00:30:45,099] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-03-16 00:30:45,448] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-03-16 00:30:45,583] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-03-16 00:30:46,077] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-03-16 00:30:46,292] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-03-16 00:30:46,456] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-03-16 00:30:47,054] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-03-16 00:30:48,638] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-03-16 00:30:48,952] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-03-16 00:30:49,216] [pool-1-thread-7] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-03-16 00:30:49,576] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-03-16 00:30:50,264] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-03-16 00:30:50,941] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-03-16 00:30:51,346] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-03-16 00:30:55,323] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-03-16 00:30:56,467] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-03-16 00:30:56,768] [pool-1-thread-7] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-03-16 00:30:57,025] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-03-16 00:31:05,975] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-03-16 00:31:06,465] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-03-16 00:31:06,874] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-03-16 00:31:07,595] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-03-16 00:31:08,944] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-03-16 00:31:10,690] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir:
[testng] [2024-03-16 00:31:11,040] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-03-16 00:31:11,381] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-03-16 00:31:11,929] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-03-16 00:31:12,425] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-03-16 00:31:13,082] [pool-1-thread-5] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-03-16 00:31:13,791] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-03-16 00:31:15,065] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-03-16 00:31:15,548] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-03-16 00:31:16,524] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-03-16 00:31:18,783] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-03-16 00:31:19,172] [pool-1-thread-4] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-03-16 00:33:11,922] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-03-16 00:33:12,093] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-03-16 00:33:12,542] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-03-16 00:33:12,962] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-03-16 00:33:13,476] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-03-16 00:33:13,834] [pool-1-thread-8] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-03-16 00:33:31,994] [pool-1-thread-12] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-03-16 00:33:32,704] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-03-16 00:33:32,822] [pool-1-thread-2] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-03-16 00:33:33,000] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-03-16 00:33:33,376] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-03-16 00:33:33,971] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-03-16 00:33:34,443] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-03-16 00:33:34,885] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-03-16 00:33:35,422] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-03-16 00:33:35,718] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-03-16 00:33:36,120] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-03-16 00:33:36,412] [pool-1-thread-5] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-03-16 00:34:01,363] [pool-1-thread-12] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-03-16 00:34:03,367] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-03-16 00:34:03,780] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-03-16 00:34:04,166] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-03-16 00:34:05,164] [pool-1-thread-10] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-03-16 00:34:05,742] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-03-16 00:34:05,829] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-03-16 00:34:06,050] [pool-1-thread-7] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-03-16 00:34:06,234] [pool-1-thread-9] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-03-16 00:34:07,403] [pool-1-thread-9] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-03-16 00:34:08,236] [pool-1-thread-2] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-03-16 00:34:08,426] [pool-1-thread-10] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-03-16 00:34:08,514] [pool-1-thread-7] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-03-16 00:34:09,818] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-03-16 00:34:10,101] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-03-16 00:34:10,557] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-03-16 00:34:10,859] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-03-16 00:34:12,733] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-03-16 00:34:13,169] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-03-16 00:34:13,440] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-03-16 00:34:14,447] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-03-16 00:34:14,624] [pool-1-thread-7] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-03-16 00:34:14,881] [pool-1-thread-9] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-03-16 00:34:15,715] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-03-16 00:34:16,962] [pool-1-thread-2] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-03-16 00:34:17,567] [pool-1-thread-7] Initializing /data/qa-17335/1.oir:
[testng] [2024-03-16 00:34:17,671] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-03-16 00:34:18,394] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-03-16 00:34:19,296] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-03-16 00:34:19,503] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-03-16 00:34:20,169] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-03-16 00:34:20,560] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-03-16 00:34:21,789] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-03-16 00:34:22,273] [pool-1-thread-6] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-03-16 00:34:22,861] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-03-16 00:34:23,180] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-03-16 00:34:23,429] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-03-16 00:34:24,530] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-03-16 00:34:24,836] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-03-16 00:34:25,950] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-03-16 00:34:26,336] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-03-16 00:34:26,843] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-03-16 00:34:27,414] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-03-16 00:34:27,700] [pool-1-thread-9] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-03-16 00:34:28,223] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-03-16 00:34:29,039] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-03-16 00:34:30,235] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-03-16 00:34:30,982] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-03-16 00:34:31,149] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-03-16 00:34:31,317] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-03-16 00:34:32,497] [pool-1-thread-9] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-03-16 00:34:33,972] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-03-16 00:34:34,689] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-03-16 00:35:19,118] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-03-16 00:35:19,617] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-03-16 00:35:19,865] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-03-16 00:35:20,156] [pool-1-thread-9] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 42 minutes 49 seconds
Finished: SUCCESS