Started by upstream project "BIOFORMATS-test-repo" build number 199
originally caused by:
Started by upstream project "Trigger" build number 223
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins11858318550210847498.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_31479_merge_ci -v /test/idr/repos/curated/olympus-oir:/data -v /test/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:21:00,868 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:00,870 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:21:00,870 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:00,871 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:00,871 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:00,872 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:00,872 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:00,872 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:00,873 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:00,873 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:00,874 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:00,874 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:01,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:01,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:01,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:01,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:01,091 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:01,091 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:01,091 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:01,092 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:01,092 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:21:01,093 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:21:01,093 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 220 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-09-25 01:21:01,103] [main] java.version = 17.0.2
[testng] 01:21:01,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:01,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:01,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-25_01-21-01.log]
[testng] 01:21:01,164 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-09-25 01:21:01,166] [main] testng.directory = /data
[testng] [2024-09-25 01:21:01,167] [main] testng.configDirectory = /config
[testng] [2024-09-25 01:21:01,181] [main] testng.multiplier = 1.0
[testng] [2024-09-25 01:21:01,183] [main] testng.in-memory = false
[testng] [2024-09-25 01:21:01,183] [main] testng.allow-missing = false
[testng] [2024-09-25 01:21:01,183] [main] user.language = en
[testng] [2024-09-25 01:21:01,183] [main] user.country = ${user.country}
[testng] [2024-09-25 01:21:01,183] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-09-25 01:21:17,309] [main] ----------------------------------------
[testng] [2024-09-25 01:21:17,309] [main] Total files: 283
[testng] [2024-09-25 01:21:17,309] [main] Scan time: 16.126 s (56 ms/file)
[testng] [2024-09-25 01:21:17,309] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-09-25 01:29:09,551] [pool-1-thread-1] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] 01:29:09,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:29:09,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,553 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-25_01-29-09.log]
[testng] 01:29:09,554 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c0e755 - End of configuration.
[testng] [2024-09-25 01:29:09,710] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] 01:29:09,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:29:09,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-25_01-29-09.log]
[testng] 01:29:09,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66b8ba05 - End of configuration.
[testng] [2024-09-25 01:29:09,796] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] 01:29:09,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:29:09,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,796 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-25_01-29-09.log]
[testng] 01:29:09,797 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a41b33 - End of configuration.
[testng] [2024-09-25 01:29:09,866] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] 01:29:09,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:29:09,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,867 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-25_01-29-09.log]
[testng] 01:29:09,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@620e921c - End of configuration.
[testng] [2024-09-25 01:29:09,936] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] 01:29:09,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:29:09,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,937 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-25_01-29-09.log]
[testng] 01:29:09,938 |-INFO in ch.qos.logback.core.sift.SiftProcessor@785ea6b1 - End of configuration.
[testng] [2024-09-25 01:29:10,082] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir:
[testng] 01:29:10,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:29:10,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:10,083 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-25_01-29-10.log]
[testng] 01:29:10,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@410c0ff0 - End of configuration.
[testng] [2024-09-25 01:29:10,476] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] 01:29:10,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:29:10,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:10,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-25_01-29-10.log]
[testng] 01:29:10,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f1eaa01 - End of configuration.
[testng] [2024-09-25 01:29:10,599] [pool-1-thread-6] Initializing /data/qa-17335/1.oir:
[testng] 01:29:10,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:29:10,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:10,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-25_01-29-10.log]
[testng] 01:29:10,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4424c103 - End of configuration.
[testng] [2024-09-25 01:29:10,682] [pool-1-thread-5] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] 01:29:10,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:29:10,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:10,683 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-25_01-29-10.log]
[testng] 01:29:10,683 |-INFO in ch.qos.logback.core.sift.SiftProcessor@743b6f3e - End of configuration.
[testng] [2024-09-25 01:29:10,734] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] 01:29:10,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:29:10,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:10,735 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-25_01-29-10.log]
[testng] 01:29:10,735 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ac5be1b - End of configuration.
[testng] [2024-09-25 01:29:10,740] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] 01:29:10,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:29:10,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:10,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-25_01-29-10.log]
[testng] 01:29:10,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dcdaa35 - End of configuration.
[testng] [2024-09-25 01:29:10,798] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] 01:29:10,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:29:10,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:10,799 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-25_01-29-10.log]
[testng] 01:29:10,799 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77c92989 - End of configuration.
[testng] [2024-09-25 01:29:12,047] [pool-1-thread-4] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-09-25 01:29:12,775] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-09-25 01:29:12,907] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-09-25 01:29:12,955] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-09-25 01:29:13,035] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-09-25 01:29:13,131] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-09-25 01:29:13,275] [pool-1-thread-1] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-09-25 01:29:13,529] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-09-25 01:29:13,640] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-09-25 01:29:13,724] [pool-1-thread-12] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-09-25 01:29:14,290] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-09-25 01:29:14,562] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-09-25 01:29:14,607] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-09-25 01:29:14,731] [pool-1-thread-7] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-09-25 01:29:14,771] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-09-25 01:29:14,837] [pool-1-thread-11] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-09-25 01:29:15,257] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-09-25 01:29:17,688] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-09-25 01:29:17,764] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-09-25 01:29:18,255] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-09-25 01:29:18,362] [pool-1-thread-3] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-09-25 01:29:18,554] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-09-25 01:29:18,720] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-09-25 01:29:18,851] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-09-25 01:29:19,166] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-09-25 01:29:19,277] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-09-25 01:29:19,899] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-09-25 01:29:20,078] [pool-1-thread-12] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-09-25 01:29:20,140] [pool-1-thread-8] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-09-25 01:29:20,661] [pool-1-thread-1] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-09-25 01:29:25,009] [pool-1-thread-2] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-09-25 01:29:25,106] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-09-25 01:29:25,247] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-09-25 01:29:25,727] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-09-25 01:29:25,902] [pool-1-thread-12] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-09-25 01:29:25,949] [pool-1-thread-8] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-09-25 01:29:26,334] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-09-25 01:29:27,543] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-09-25 01:29:27,924] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-09-25 01:29:28,013] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-09-25 01:29:28,118] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-09-25 01:29:28,485] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-09-25 01:29:28,610] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-09-25 01:29:29,158] [pool-1-thread-4] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-09-25 01:29:29,500] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-09-25 01:29:29,946] [pool-1-thread-12] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-09-25 01:29:30,031] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-09-25 01:29:30,579] [pool-1-thread-2] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-09-25 01:29:30,786] [pool-1-thread-8] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-09-25 01:29:55,981] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-09-25 01:29:56,120] [pool-1-thread-7] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-09-25 01:29:56,832] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-09-25 01:29:57,286] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-09-25 01:29:57,713] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-09-25 01:29:57,860] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-09-25 01:29:57,947] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-09-25 01:29:58,127] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-09-25 01:30:02,024] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-09-25 01:30:02,519] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-09-25 01:30:02,707] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-09-25 01:30:03,129] [pool-1-thread-5] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-09-25 01:30:03,280] [pool-1-thread-4] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-09-25 01:30:03,337] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-09-25 01:30:03,896] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-09-25 01:30:04,616] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-09-25 01:30:04,812] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-09-25 01:30:05,093] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-09-25 01:30:07,136] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-09-25 01:30:07,338] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-09-25 01:30:07,607] [pool-1-thread-9] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-09-25 01:30:07,936] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-09-25 01:30:08,561] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-09-25 01:30:08,819] [pool-1-thread-2] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-09-25 01:30:09,079] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-09-25 01:30:09,145] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-09-25 01:30:09,357] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-09-25 01:30:09,454] [pool-1-thread-11] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-09-25 01:30:09,491] [pool-1-thread-5] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-09-25 01:30:09,650] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-09-25 01:30:10,272] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-09-25 01:30:10,337] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-09-25 01:30:11,736] [pool-1-thread-4] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-09-25 01:30:11,818] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-09-25 01:30:12,024] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-09-25 01:30:12,162] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-09-25 01:30:12,750] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-09-25 01:30:13,094] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-09-25 01:30:13,225] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-09-25 01:30:13,306] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-09-25 01:30:13,433] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-09-25 01:30:13,505] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-09-25 01:30:14,366] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-09-25 01:30:16,721] [pool-1-thread-1] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-09-25 01:30:32,537] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-09-25 01:30:32,664] [pool-1-thread-3] Initializing /data/qa-17270/image1.oir:
[testng] [2024-09-25 01:30:32,787] [pool-1-thread-11] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-09-25 01:30:33,159] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-09-25 01:30:33,703] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-09-25 01:30:34,581] [pool-1-thread-4] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-09-25 01:30:36,085] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-09-25 01:30:36,170] [pool-1-thread-11] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-09-25 01:30:36,225] [pool-1-thread-3] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-09-25 01:30:36,482] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-09-25 01:30:37,239] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-09-25 01:30:37,754] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-09-25 01:30:38,142] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-09-25 01:30:38,350] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-09-25 01:30:38,947] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-09-25 01:30:39,288] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-09-25 01:30:39,353] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-09-25 01:30:40,182] [pool-1-thread-5] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-09-25 01:30:40,977] [pool-1-thread-11] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-09-25 01:31:23,052] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-09-25 01:31:23,727] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-09-25 01:31:26,070] [pool-1-thread-4] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-09-25 01:31:26,419] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-09-25 01:31:26,808] [pool-1-thread-2] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-09-25 01:31:27,269] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-09-25 01:31:27,656] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-09-25 01:31:28,098] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-09-25 01:31:46,420] [pool-1-thread-2] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-09-25 01:31:46,631] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-09-25 01:31:47,202] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-09-25 01:31:48,206] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-09-25 01:31:49,362] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-09-25 01:31:49,536] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-09-25 01:31:50,271] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-09-25 01:31:50,574] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-09-25 01:31:50,940] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-09-25 01:31:51,240] [pool-1-thread-7] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-09-25 01:31:51,899] [pool-1-thread-3] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-09-25 01:31:52,107] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-09-25 01:31:52,485] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-09-25 01:31:52,962] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-09-25 01:31:53,353] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-09-25 01:31:53,488] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-09-25 01:31:53,611] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-09-25 01:31:54,013] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-09-25 01:31:54,540] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-09-25 01:31:54,607] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-09-25 01:31:54,811] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-09-25 01:31:54,947] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-09-25 01:31:55,414] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-09-25 01:31:56,028] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-09-25 01:31:56,111] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-09-25 01:31:56,275] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-09-25 01:31:56,492] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-09-25 01:31:56,837] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-09-25 01:31:57,192] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-09-25 01:32:00,910] [pool-1-thread-4] Initializing /data/olympus/XYZt.oir:
[testng] [2024-09-25 01:32:02,082] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-09-25 01:32:02,525] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-09-25 01:32:02,608] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-09-25 01:32:02,881] [pool-1-thread-10] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] [2024-09-25 01:32:03,667] [pool-1-thread-3] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-09-25 01:32:03,724] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-09-25 01:32:03,906] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-09-25 01:32:04,454] [pool-1-thread-7] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-09-25 01:32:05,080] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-09-25 01:32:05,257] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-09-25 01:32:05,452] [pool-1-thread-10] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-09-25 01:32:05,673] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-09-25 01:32:05,973] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-09-25 01:32:06,648] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-09-25 01:32:06,753] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-09-25 01:32:07,270] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-09-25 01:32:07,701] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-09-25 01:32:08,231] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-09-25 01:32:08,520] [pool-1-thread-7] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-09-25 01:32:08,662] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-09-25 01:32:08,917] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-09-25 01:32:09,726] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-09-25 01:32:10,066] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-09-25 01:32:10,138] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 40 minutes 2 seconds
Finished: SUCCESS