Started by upstream project "BIOFORMATS-test-repo" build number 202
originally caused by:
Started by upstream project "Trigger" build number 228
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins8966948731463469301.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_32002_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 05:44:37,872 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 05:44:37,874 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 05:44:37,874 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 05:44:37,875 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 05:44:37,875 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 05:44:37,875 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 05:44:37,875 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 05:44:37,875 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 05:44:37,876 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 05:44:37,876 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 05:44:37,876 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 05:44:37,876 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 05:44:38,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 05:44:38,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 05:44:38,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 05:44:38,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 05:44:38,169 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 05:44:38,169 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 05:44:38,169 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 05:44:38,169 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 05:44:38,170 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 05:44:38,170 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 05:44:38,170 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 294 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-09-27 05:44:38,180] [main] java.version = 1.8.0_342
[testng] 05:44:38,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 05:44:38,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:44:38,228 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-27_05-44-38.log]
[testng] 05:44:38,229 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-09-27 05:44:38,231] [main] testng.directory = /data
[testng] [2024-09-27 05:44:38,232] [main] testng.configDirectory = /config
[testng] [2024-09-27 05:44:38,244] [main] testng.multiplier = 1.0
[testng] [2024-09-27 05:44:38,244] [main] testng.in-memory = false
[testng] [2024-09-27 05:44:38,244] [main] testng.allow-missing = false
[testng] [2024-09-27 05:44:38,244] [main] user.language = en
[testng] [2024-09-27 05:44:38,244] [main] user.country = ${user.country}
[testng] [2024-09-27 05:44:38,244] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-09-27 05:44:57,014] [main] ----------------------------------------
[testng] [2024-09-27 05:44:57,014] [main] Total files: 259
[testng] [2024-09-27 05:44:57,014] [main] Scan time: 18.77 s (72 ms/file)
[testng] [2024-09-27 05:44:57,014] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-09-27 05:51:53,851] [pool-1-thread-1] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] 05:51:53,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 05:51:53,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:51:53,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-27_05-51-53.log]
[testng] 05:51:53,854 |-INFO in ch.qos.logback.core.sift.SiftProcessor@277f187c - End of configuration.
[testng] [2024-09-27 05:51:54,476] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] 05:51:54,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 05:51:54,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:51:54,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-27_05-51-54.log]
[testng] 05:51:54,478 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f1d98be - End of configuration.
[testng] [2024-09-27 05:51:54,913] [pool-1-thread-11] Initializing /data/allan/62909#1.oib:
[testng] 05:51:54,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 05:51:54,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:51:54,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-27_05-51-54.log]
[testng] 05:51:54,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1147f9a8 - End of configuration.
[testng] [2024-09-27 05:51:55,079] [pool-1-thread-10] Initializing /data/molly/11OCT5.OIF:
[testng] 05:51:55,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 05:51:55,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:51:55,079 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-27_05-51-55.log]
[testng] 05:51:55,080 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36db0ffe - End of configuration.
[testng] [2024-09-27 05:51:58,170] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oib:
[testng] 05:51:58,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 05:51:58,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:51:58,171 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-27_05-51-58.log]
[testng] 05:51:58,171 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a6518b5 - End of configuration.
[testng] [2024-09-27 05:51:58,355] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] 05:51:58,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 05:51:58,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:51:58,356 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-27_05-51-58.log]
[testng] 05:51:58,357 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f6cf20b - End of configuration.
[testng] [2024-09-27 05:51:58,641] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] 05:51:58,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 05:51:58,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:51:58,642 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-27_05-51-58.log]
[testng] 05:51:58,643 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d5e7ee2 - End of configuration.
[testng] [2024-09-27 05:52:01,222] [pool-1-thread-6] Initializing /data/satoshi/60x_5x_1.oif:
[testng] 05:52:01,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 05:52:01,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:52:01,223 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-27_05-52-01.log]
[testng] 05:52:01,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2dcb11ec - End of configuration.
[testng] [2024-09-27 05:52:01,606] [pool-1-thread-5] Initializing /data/tom/RGB-1.avi:
[testng] 05:52:01,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 05:52:01,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:52:01,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-27_05-52-01.log]
[testng] 05:52:01,607 |-INFO in ch.qos.logback.core.sift.SiftProcessor@458d281d - End of configuration.
[testng] [2024-09-27 05:52:01,699] [pool-1-thread-4] Initializing /data/marc/V0606J.oib:
[testng] 05:52:01,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 05:52:01,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:52:01,700 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-27_05-52-01.log]
[testng] 05:52:01,700 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c0f79c7 - End of configuration.
[testng] [2024-09-27 05:52:02,937] [pool-1-thread-3] Initializing /data/glen/111407.oif:
[testng] 05:52:02,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 05:52:02,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:52:02,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-27_05-52-02.log]
[testng] 05:52:02,938 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17df998f - End of configuration.
[testng] [2024-09-27 05:52:03,842] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib:
[testng] 05:52:03,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 05:52:03,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:52:03,842 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-27_05-52-03.log]
[testng] 05:52:03,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a2d22c - End of configuration.
[testng] [2024-09-27 05:52:09,382] [pool-1-thread-9] Initializing /data/monica/Image0056.oif:
[testng] [2024-09-27 05:52:09,901] [pool-1-thread-11] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2024-09-27 05:52:10,220] [pool-1-thread-5] Initializing /data/glen/singlesimul.oib:
[testng] [2024-09-27 05:52:10,515] [pool-1-thread-2] Initializing /data/johannes/step1.bmp:
[testng] [2024-09-27 05:52:10,572] [pool-1-thread-8] Initializing /data/glen/Null file/test change.oif:
[testng] [2024-09-27 05:52:10,977] [pool-1-thread-12] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2024-09-27 05:52:13,307] [pool-1-thread-2] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2024-09-27 05:52:15,226] [pool-1-thread-11] Initializing /data/karl/Image0009.oib:
[testng] [2024-09-27 05:52:15,887] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] [2024-09-27 05:52:29,131] [pool-1-thread-4] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2024-09-27 05:52:36,438] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2024-09-27 05:52:36,999] [pool-1-thread-5] Initializing /data/glen/Null file/test no change.oif:
[testng] [2024-09-27 05:52:39,454] [pool-1-thread-4] Initializing /data/marc/V0606L.oib:
[testng] [2024-09-27 05:52:41,986] [pool-1-thread-11] Initializing /data/pedro/plv-test.oib:
[testng] [2024-09-27 05:52:46,093] [pool-1-thread-11] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2024-09-27 05:52:49,395] [pool-1-thread-11] Initializing /data/glen/notsaturated.oib:
[testng] [2024-09-27 05:52:52,398] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] [2024-09-27 05:52:53,613] [pool-1-thread-4] Initializing /data/molly/11OCT3.OIF:
[testng] [2024-09-27 05:53:27,432] [pool-1-thread-11] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2024-09-27 05:53:37,079] [pool-1-thread-8] Initializing /data/brian/lambda02nm.oib:
[testng] [2024-09-27 05:53:40,318] [pool-1-thread-5] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2024-09-27 05:53:44,781] [pool-1-thread-9] Initializing /data/brian/FLIP.oib:
[testng] [2024-09-27 05:53:46,882] [pool-1-thread-8] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2024-09-27 05:53:50,773] [pool-1-thread-5] Initializing /data/chris/missegragation-15.oib:
[testng] [2024-09-27 05:53:51,191] [pool-1-thread-9] Initializing /data/glen/simulstack.oib:
[testng] [2024-09-27 05:53:52,957] [pool-1-thread-5] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2024-09-27 05:53:55,103] [pool-1-thread-9] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2024-09-27 05:53:57,184] [pool-1-thread-11] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2024-09-27 05:54:02,035] [pool-1-thread-11] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] [2024-09-27 05:54:06,556] [pool-1-thread-11] Initializing /data/qa-17748/Image0079.oib:
[testng] [2024-09-27 05:54:09,755] [pool-1-thread-11] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2024-09-27 05:54:14,902] [pool-1-thread-11] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2024-09-27 05:54:19,083] [pool-1-thread-11] Initializing /data/glen/singleseqframe.oif:
[testng] [2024-09-27 05:54:28,155] [pool-1-thread-9] Initializing /data/jae/Image0001.oib:
[testng] [2024-09-27 05:54:33,691] [pool-1-thread-9] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2024-09-27 05:54:37,258] [pool-1-thread-9] Initializing /data/johannes/step4b.bmp:
[testng] [2024-09-27 05:54:39,070] [pool-1-thread-9] Initializing /data/david/Image0016.oib:
[testng] [2024-09-27 05:54:40,378] [pool-1-thread-12] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2024-09-27 05:54:45,061] [pool-1-thread-2] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2024-09-27 05:55:44,678] [pool-1-thread-9] Initializing /data/christian/20min.oif:
[testng] [2024-09-27 05:55:48,921] [pool-1-thread-11] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2024-09-27 05:55:51,952] [pool-1-thread-6] Initializing /data/yoshihito/XY.oib:
[testng] [2024-09-27 05:55:52,660] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2024-09-27 05:55:55,860] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2024-09-27 05:55:57,883] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2024-09-27 05:55:58,842] [pool-1-thread-1] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2024-09-27 05:56:02,456] [pool-1-thread-11] Initializing /data/glen/singlesimul.oif:
[testng] [2024-09-27 05:56:03,377] [pool-1-thread-6] Initializing /data/molly/11OCT4.OIF:
[testng] [2024-09-27 05:56:15,968] [pool-1-thread-1] Initializing /data/glen/singleseqline.oif:
[testng] [2024-09-27 05:56:19,469] [pool-1-thread-9] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2024-09-27 05:56:24,219] [pool-1-thread-9] Initializing /data/kay/IM2pg.oib:
[testng] [2024-09-27 05:56:29,348] [pool-1-thread-9] Initializing /data/molly/11OCT9.OIF:
[testng] [2024-09-27 05:57:19,230] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2024-09-27 05:57:20,731] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib:
[testng] [2024-09-27 05:57:25,134] [pool-1-thread-11] Initializing /data/johannes/step3.bmp:
[testng] [2024-09-27 05:57:26,536] [pool-1-thread-1] Initializing /data/brian/Kaede15.oib:
[testng] [2024-09-27 05:57:28,587] [pool-1-thread-11] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2024-09-27 05:57:33,253] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2024-09-27 05:57:33,421] [pool-1-thread-11] Initializing /data/molly/11OCT2.OIF:
[testng] [2024-09-27 05:58:08,420] [pool-1-thread-1] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2024-09-27 05:58:14,625] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2024-09-27 05:58:20,810] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib:
[testng] [2024-09-27 05:58:30,278] [pool-1-thread-1] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2024-09-27 06:00:05,900] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oib:
[testng] [2024-09-27 06:00:12,512] [pool-1-thread-1] Initializing /data/molly/11OCT11.OIF:
[testng] [2024-09-27 06:04:32,751] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2024-09-27 06:04:38,454] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2024-09-27 06:04:44,857] [pool-1-thread-5] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2024-09-27 06:04:53,130] [pool-1-thread-3] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2024-09-27 06:04:57,281] [pool-1-thread-3] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2024-09-27 06:05:03,361] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] [2024-09-27 06:05:09,276] [pool-1-thread-3] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] [2024-09-27 06:05:12,687] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2024-09-27 06:05:19,228] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib:
[testng] [2024-09-27 06:05:27,259] [pool-1-thread-3] Initializing /data/johannes/step2.bmp:
[testng] [2024-09-27 06:05:29,404] [pool-1-thread-3] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2024-09-27 06:06:11,712] [pool-1-thread-3] Initializing /data/molly/11OCT10.OIF:
[testng] [2024-09-27 06:07:45,926] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2024-09-27 06:07:51,333] [pool-1-thread-8] Initializing /data/molly/11OCT6.OIF:
[testng] [2024-09-27 06:09:21,757] [pool-1-thread-10] Initializing /data/johannes/step4.bmp:
[testng] [2024-09-27 06:09:23,786] [pool-1-thread-10] Initializing /data/molly/11OCT7.OIF:
[testng] [2024-09-27 06:13:22,973] [pool-1-thread-12] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2024-09-27 06:13:29,060] [pool-1-thread-12] Initializing /data/glen/notsaturated.oif:
[testng] [2024-09-27 06:14:22,129] [pool-1-thread-6] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2024-09-27 06:19:02,027] [pool-1-thread-5] Initializing /data/sten/01.oib:
[testng] [2024-09-27 06:19:10,020] [pool-1-thread-5] Initializing /data/glen/4205basal106072.oif:
[testng] [2024-09-27 06:19:46,119] [pool-1-thread-7] Initializing /data/aryeh/1h.oib:
[testng] [2024-09-27 06:19:55,641] [pool-1-thread-7] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2024-09-27 06:20:02,497] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2024-09-27 06:20:20,332] [pool-1-thread-7] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2024-09-27 06:20:28,549] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2024-09-27 06:20:34,455] [pool-1-thread-7] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2024-09-27 06:20:46,828] [pool-1-thread-7] Initializing /data/aryeh/030408 2 1.oib:
[testng] [2024-09-27 06:20:52,940] [pool-1-thread-7] Initializing /data/michael/CELL3.oib:
[testng] [2024-09-27 06:20:59,198] [pool-1-thread-7] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2024-09-27 06:21:05,444] [pool-1-thread-7] Initializing /data/glen/Image0002.oif:
[testng] [2024-09-27 06:24:13,775] [pool-1-thread-12] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2024-09-27 06:24:57,899] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2024-09-27 06:25:03,560] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2024-09-27 06:25:07,806] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] [2024-09-27 06:32:38,694] [pool-1-thread-10] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2024-09-27 06:32:45,617] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib:
[testng] [2024-09-27 06:32:55,612] [pool-1-thread-10] Initializing /data/aryeh/control_test.oib:
[testng] [2024-09-27 06:33:19,856] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2024-09-27 06:33:24,761] [pool-1-thread-10] Initializing /data/david/Image0016.oif:
[testng] [2024-09-27 06:34:08,603] [pool-1-thread-8] Initializing /data/molly/11OCT8.OIF:
[testng] [2024-09-27 06:34:31,937] [pool-1-thread-10] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2024-09-27 06:34:37,540] [pool-1-thread-10] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2024-09-27 06:34:41,723] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2024-09-27 06:34:44,880] [pool-1-thread-12] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2024-09-27 06:34:46,598] [pool-1-thread-10] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2024-09-27 06:34:50,519] [pool-1-thread-12] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2024-09-27 06:34:54,617] [pool-1-thread-12] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2024-09-27 06:35:22,430] [pool-1-thread-10] Initializing /data/yoshihito/XY.oif:
[testng] [2024-09-27 06:35:44,295] [pool-1-thread-10] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] [2024-09-27 06:36:17,647] [pool-1-thread-10] Initializing /data/glen/singleseqline.oib:
[testng] [2024-09-27 06:36:20,970] [pool-1-thread-10] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2024-09-27 06:37:08,484] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2024-09-27 06:37:09,637] [pool-1-thread-1] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2024-09-27 06:37:13,468] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2024-09-27 06:37:19,101] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2024-09-27 06:37:23,384] [pool-1-thread-9] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] [2024-09-27 06:37:24,586] [pool-1-thread-3] Initializing /data/simon/never_worked.oib:
[testng] [2024-09-27 06:37:28,776] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2024-09-27 06:37:29,412] [pool-1-thread-1] Initializing /data/yasunori/series_1.oib:
[testng] [2024-09-27 06:37:32,449] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2024-09-27 06:37:34,117] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2024-09-27 06:37:37,830] [pool-1-thread-3] Initializing /data/glen/simulstack.oif:
[testng] [2024-09-27 06:37:41,426] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oif:
[testng] [2024-09-27 06:37:59,072] [pool-1-thread-9] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] [2024-09-27 06:38:05,183] [pool-1-thread-9] Initializing /data/johannes/step5b.bmp:
[testng] [2024-09-27 06:38:07,601] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] 07:04:10,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 07:04:10,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:04:10,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-27_07-04-10.log]
[testng] 07:04:10,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@210d0265 - End of configuration.
[testng] 07:26:23,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 07:26:23,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:26:23,541 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-27_07-26-23.log]
[testng] 07:26:23,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c2ad216 - End of configuration.
[testng] 07:34:53,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 07:34:53,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:34:53,892 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-27_07-34-53.log]
[testng] 07:34:53,893 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ba64e36 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 110 minutes 18 seconds
Finished: SUCCESS