Started by upstream project "<a href='/jenkins/job/BIOFORMATS-test-repo/' class='jenkins-table__link model-link model-link--float'>BIOFORMATS-test-repo</a>" build number <a href='/jenkins/job/BIOFORMATS-test-repo/204' class='jenkins-table__link model-link model-link--float'>204</a>
originally caused by:
 Started by upstream project "<a href='/jenkins/job/Trigger/' class='jenkins-table__link model-link model-link--float'>Trigger</a>" build number <a href='/jenkins/job/Trigger/230' class='jenkins-table__link model-link model-link--float'>230</a>
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on <a href='/jenkins/computer/docker' class='jenkins-table__link model-link model-link--float'>docker</a> (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins13139545064830141722.sh
+ '[' cellh5 = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_32311_merge_ci -v /uod/idr/repos/curated/cellh5:/data -v /uod/idr-scratch/merge-ci/curated/cellh5:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:33:02,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:33:02,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:33:02,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:33:02,086 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:33:02,087 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:33:02,087 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:33:02,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:33:02,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:33:02,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:33:02,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:33:02,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:33:02,089 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:33:02,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:33:02,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:33:02,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:33:02,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:33:02,266 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:33:02,266 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:33:02,266 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:33:02,267 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:33:02,267 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:33:02,268 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:33:02,268 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 180 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-09-29 01:33:02,276] [main] java.version = 17.0.2
   [testng] 01:33:02,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:33:02,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:33:02,317 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-29_01-33-02.log]
   [testng] 01:33:02,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-09-29 01:33:02,320] [main] testng.directory = /data
   [testng] [2024-09-29 01:33:02,321] [main] testng.configDirectory = /config
   [testng] [2024-09-29 01:33:02,330] [main] testng.multiplier = 1.0
   [testng] [2024-09-29 01:33:02,331] [main] testng.in-memory = false
   [testng] [2024-09-29 01:33:02,331] [main] testng.allow-missing = false
   [testng] [2024-09-29 01:33:02,331] [main] user.language = en
   [testng] [2024-09-29 01:33:02,331] [main] user.country = ${user.country}
   [testng] [2024-09-29 01:33:02,331] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-09-29 01:33:02,963] [main] ----------------------------------------
   [testng] [2024-09-29 01:33:02,963] [main] Total files: 11
   [testng] [2024-09-29 01:33:02,963] [main] Scan time: 0.632 s (57 ms/file)
   [testng] [2024-09-29 01:33:02,963] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 10 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-09-29 01:37:05,607] [pool-1-thread-1] Initializing /data/public/samples/full/0046.ch5: 
   [testng] 01:37:05,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:37:05,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:05,608 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-29_01-37-05.log]
   [testng] 01:37:05,609 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fc505a0 - End of configuration.
   [testng] [2024-09-29 01:37:05,895] [pool-1-thread-10] Initializing /data/public/idr0013/00001_01.ch5: 
   [testng] 01:37:05,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:37:05,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:05,896 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-29_01-37-05.log]
   [testng] 01:37:05,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7963e186 - End of configuration.
   [testng] [2024-09-29 01:37:06,334] [pool-1-thread-9] Initializing /data/public/samples/full/0037.ch5: 
   [testng] 01:37:06,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:37:06,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:06,335 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-29_01-37-06.log]
   [testng] 01:37:06,335 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cf49ddf - End of configuration.
   [testng] [2024-09-29 01:37:06,658] [pool-1-thread-8] Initializing /data/public/samples/full/0042.ch5: 
   [testng] 01:37:06,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:37:06,659 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:06,659 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-29_01-37-06.log]
   [testng] 01:37:06,660 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5326c4ac - End of configuration.
   [testng] [2024-09-29 01:37:06,929] [pool-1-thread-7] Initializing /data/public/samples/full/0041.ch5: 
   [testng] 01:37:06,930 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:37:06,930 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:06,930 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-29_01-37-06.log]
   [testng] 01:37:06,931 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e1b87e8 - End of configuration.
   [testng] [2024-09-29 01:37:07,192] [pool-1-thread-6] Initializing /data/public/samples/full/0013.ch5: 
   [testng] 01:37:07,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:37:07,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:07,194 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-29_01-37-07.log]
   [testng] 01:37:07,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5368b718 - End of configuration.
   [testng] [2024-09-29 01:37:07,525] [pool-1-thread-5] Initializing /data/public/samples/full/0045.ch5: 
   [testng] 01:37:07,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:37:07,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:07,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-29_01-37-07.log]
   [testng] 01:37:07,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5817595c - End of configuration.
   [testng] [2024-09-29 01:37:07,804] [pool-1-thread-4] Initializing /data/public/samples/full/0039.ch5: 
   [testng] 01:37:07,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:37:07,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:07,805 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-29_01-37-07.log]
   [testng] 01:37:07,806 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73cf4b57 - End of configuration.
   [testng] [2024-09-29 01:37:08,140] [pool-1-thread-3] Initializing /data/public/samples/reduced/0038.ch5: 
   [testng] 01:37:08,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:37:08,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:08,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-29_01-37-08.log]
   [testng] 01:37:08,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4224398b - End of configuration.
   [testng] [2024-09-29 01:37:08,457] [pool-1-thread-2] Initializing /data/public/samples/full/0040.ch5: 
   [testng] 01:37:08,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:37:08,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:08,458 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-29_01-37-08.log]
   [testng] 01:37:08,459 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798f4a3e - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 530, Failures: 0, Skips: 10
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 19 minutes 8 seconds
Finished: SUCCESS