Started by upstream project "BIOFORMATS-test-repo" build number 26
originally caused by:
Started by upstream project "Trigger" build number 29
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins9862445577605254869.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_3267_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:20:58,333 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:20:58,334 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:20:58,334 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:58,335 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:58,335 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:20:58,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:20:58,336 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:20:58,336 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:58,336 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:58,337 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:20:58,337 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:20:58,337 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:20:58,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:20:58,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:20:58,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:20:58,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:20:58,566 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:20:58,567 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:20:58,567 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:20:58,567 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:20:58,567 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:20:58,568 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:20:58,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 232 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-04-07 01:20:58,578] [main] java.version = 17.0.2
[testng] 01:20:58,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:20:58,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:58,628 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-07_01-20-58.log]
[testng] 01:20:58,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-04-07 01:20:58,631] [main] testng.directory = /data
[testng] [2024-04-07 01:20:58,632] [main] testng.configDirectory = /config
[testng] [2024-04-07 01:20:58,644] [main] testng.multiplier = 1.0
[testng] [2024-04-07 01:20:58,645] [main] testng.in-memory = false
[testng] [2024-04-07 01:20:58,645] [main] testng.allow-missing = false
[testng] [2024-04-07 01:20:58,645] [main] user.language = en
[testng] [2024-04-07 01:20:58,645] [main] user.country = ${user.country}
[testng] [2024-04-07 01:20:58,645] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-04-07 01:20:59,031] [main] ----------------------------------------
[testng] [2024-04-07 01:20:59,031] [main] Total files: 21
[testng] [2024-04-07 01:20:59,031] [main] Scan time: 0.386 s (18 ms/file)
[testng] [2024-04-07 01:20:59,032] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-04-07 01:21:00,265] [pool-1-thread-1] Initializing /data/venu/Kontrolle0004.lim:
[testng] 01:21:00,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:21:00,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,267 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-07_01-21-00.log]
[testng] 01:21:00,268 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ae40cf1 - End of configuration.
[testng] [2024-04-07 01:21:00,343] [pool-1-thread-12] Initializing /data/venu/Kontrolle0005.lim:
[testng] 01:21:00,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:21:00,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-07_01-21-00.log]
[testng] 01:21:00,346 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cec9f37 - End of configuration.
[testng] [2024-04-07 01:21:00,370] [pool-1-thread-11] Initializing /data/venu/Kontrolle0003.lim:
[testng] 01:21:00,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:21:00,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-07_01-21-00.log]
[testng] 01:21:00,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@339e99d1 - End of configuration.
[testng] [2024-04-07 01:21:00,393] [pool-1-thread-10] Initializing /data/venu/Kontrolle0019.lim:
[testng] 01:21:00,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:21:00,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-07_01-21-00.log]
[testng] 01:21:00,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28932618 - End of configuration.
[testng] [2024-04-07 01:21:00,421] [pool-1-thread-9] Initializing /data/venu/Kontrolle0012.lim:
[testng] 01:21:00,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:21:00,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-07_01-21-00.log]
[testng] 01:21:00,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29f7e370 - End of configuration.
[testng] [2024-04-07 01:21:00,447] [pool-1-thread-8] Initializing /data/venu/Kontrolle0010.lim:
[testng] 01:21:00,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:21:00,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-07_01-21-00.log]
[testng] 01:21:00,448 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b3e507b - End of configuration.
[testng] [2024-04-07 01:21:00,467] [pool-1-thread-7] Initializing /data/venu/Kontrolle0002.lim:
[testng] 01:21:00,467 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:21:00,467 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,468 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-07_01-21-00.log]
[testng] 01:21:00,468 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ba3d91f - End of configuration.
[testng] [2024-04-07 01:21:00,485] [pool-1-thread-6] Initializing /data/venu/Kontrolle0021.lim:
[testng] 01:21:00,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:21:00,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,487 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-07_01-21-00.log]
[testng] 01:21:00,488 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f6cff2c - End of configuration.
[testng] [2024-04-07 01:21:00,509] [pool-1-thread-5] Initializing /data/venu/Kontrolle0001.lim:
[testng] 01:21:00,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:21:00,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,510 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-07_01-21-00.log]
[testng] 01:21:00,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b11b4a5 - End of configuration.
[testng] [2024-04-07 01:21:00,534] [pool-1-thread-4] Initializing /data/venu/Kontrolle0020.lim:
[testng] 01:21:00,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:21:00,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-07_01-21-00.log]
[testng] 01:21:00,536 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d7b7883 - End of configuration.
[testng] [2024-04-07 01:21:00,548] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim:
[testng] 01:21:00,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:21:00,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-07_01-21-00.log]
[testng] 01:21:00,550 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41a89e1c - End of configuration.
[testng] [2024-04-07 01:21:00,564] [pool-1-thread-2] Initializing /data/venu/Kontrolle0018.lim:
[testng] 01:21:00,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:21:00,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:00,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-07_01-21-00.log]
[testng] 01:21:00,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79bc10b8 - End of configuration.
[testng] [2024-04-07 01:21:03,102] [pool-1-thread-12] Initializing /data/venu/Kontrolle0007.lim:
[testng] [2024-04-07 01:21:03,114] [pool-1-thread-6] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-04-07 01:21:03,128] [pool-1-thread-7] Initializing /data/venu/Kontrolle0008.lim:
[testng] [2024-04-07 01:21:03,143] [pool-1-thread-2] Initializing /data/venu/Kontrolle0014.lim:
[testng] [2024-04-07 01:21:03,156] [pool-1-thread-1] Initializing /data/venu/Kontrolle0009.lim:
[testng] [2024-04-07 01:21:03,173] [pool-1-thread-8] Initializing /data/venu/Kontrolle0016.lim:
[testng] [2024-04-07 01:21:03,189] [pool-1-thread-3] Initializing /data/venu/Kontrolle0015.lim:
[testng] [2024-04-07 01:21:03,206] [pool-1-thread-4] Initializing /data/venu/Kontrolle0017.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 11 seconds
Finished: SUCCESS