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Started by upstream project "BIOFORMATS-test-repo" build number 209 originally caused by: Started by upstream project "Trigger" build number 235 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins5959271273774754487.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33111_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:22:27,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:27,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:27,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:27,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:27,179 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:27,179 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:27,179 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:27,180 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:27,180 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:22:27,181 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:22:27,181 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 377 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-04 01:22:27,191] [main] java.version = 1.8.0_342 [testng] 01:22:27,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:27,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:27,280 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-04_01-22-27.log] [testng] 01:22:27,282 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-10-04 01:22:27,284] [main] testng.directory = /data [testng] [2024-10-04 01:22:27,284] [main] testng.configDirectory = /config [testng] [2024-10-04 01:22:27,296] [main] testng.multiplier = 1.0 [testng] [2024-10-04 01:22:27,296] [main] testng.in-memory = false [testng] [2024-10-04 01:22:27,296] [main] testng.allow-missing = false [testng] [2024-10-04 01:22:27,296] [main] user.language = en [testng] [2024-10-04 01:22:27,296] [main] user.country = ${user.country} [testng] [2024-10-04 01:22:27,296] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-04 01:22:30,780] [main] ---------------------------------------- [testng] [2024-10-04 01:22:30,781] [main] Total files: 103 [testng] [2024-10-04 01:22:30,781] [main] Scan time: 3.484 s (33 ms/file) [testng] [2024-10-04 01:22:30,781] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-04 01:22:42,634] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] 01:22:42,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:22:42,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-04_01-22-42.log] [testng] 01:22:42,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@627cb3a0 - End of configuration. [testng] [2024-10-04 01:22:42,703] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] 01:22:42,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:22:42,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-04_01-22-42.log] [testng] 01:22:42,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b8727a6 - End of configuration. [testng] [2024-10-04 01:22:42,761] [pool-1-thread-11] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 01:22:42,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:22:42,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,762 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-04_01-22-42.log] [testng] 01:22:42,762 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50c25c5f - End of configuration. [testng] [2024-10-04 01:22:42,791] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] 01:22:42,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:42,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,792 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-04_01-22-42.log] [testng] 01:22:42,792 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69b8045a - End of configuration. [testng] [2024-10-04 01:22:42,824] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:22:42,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:42,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-04_01-22-42.log] [testng] 01:22:42,833 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3736daa9 - End of configuration. [testng] [2024-10-04 01:22:42,894] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] 01:22:42,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:42,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-04_01-22-42.log] [testng] 01:22:42,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424bcfa4 - End of configuration. [testng] [2024-10-04 01:22:42,957] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] 01:22:42,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:42,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:42,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-04_01-22-42.log] [testng] 01:22:42,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31a24c54 - End of configuration. [testng] [2024-10-04 01:22:43,091] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] 01:22:43,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:43,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:43,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-04_01-22-43.log] [testng] 01:22:43,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fd5a4f7 - End of configuration. [testng] [2024-10-04 01:22:43,390] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 01:22:43,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:43,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:43,391 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-04_01-22-43.log] [testng] 01:22:43,392 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e9165e7 - End of configuration. [testng] [2024-10-04 01:22:43,424] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 01:22:43,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:43,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:43,425 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-04_01-22-43.log] [testng] 01:22:43,425 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58f83363 - End of configuration. [testng] [2024-10-04 01:22:43,447] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3: [testng] 01:22:43,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:43,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:43,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-04_01-22-43.log] [testng] 01:22:43,448 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37984a9e - End of configuration. [testng] [2024-10-04 01:22:43,483] [pool-1-thread-2] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] 01:22:43,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:43,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:43,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-04_01-22-43.log] [testng] 01:22:43,485 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cf12664 - End of configuration. [testng] [2024-10-04 01:22:47,398] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-10-04 01:22:47,425] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-10-04 01:22:47,460] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-10-04 01:22:48,091] [pool-1-thread-7] Initializing /data/qa-7642/8.dm4: [testng] [2024-10-04 01:22:48,456] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-10-04 01:22:50,175] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-10-04 01:22:50,214] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-04 01:22:50,541] [pool-1-thread-10] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-10-04 01:22:50,746] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-10-04 01:22:50,829] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-10-04 01:22:50,864] [pool-1-thread-8] Initializing /data/samples/test-tiles.dm3: [testng] [2024-10-04 01:22:51,218] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-10-04 01:22:51,259] [pool-1-thread-3] Initializing /data/jay/dnasample1.dm3: [testng] [2024-10-04 01:22:51,346] [pool-1-thread-4] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-10-04 01:22:52,008] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-10-04 01:22:52,231] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-10-04 01:22:53,600] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-10-04 01:22:54,138] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-10-04 01:22:54,648] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-10-04 01:22:54,722] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-10-04 01:22:54,977] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-10-04 01:22:57,310] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-10-04 01:22:58,408] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-10-04 01:22:59,162] [pool-1-thread-9] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-10-04 01:22:59,253] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-10-04 01:22:59,367] [pool-1-thread-4] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-10-04 01:23:00,215] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-04 01:23:01,055] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-10-04 01:23:01,152] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-10-04 01:23:01,673] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-10-04 01:23:02,894] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-04 01:23:03,272] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-10-04 01:23:03,414] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-10-04 01:23:03,511] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-10-04 01:23:03,641] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-10-04 01:23:04,202] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-10-04 01:23:06,008] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-10-04 01:23:06,374] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-10-04 01:23:08,286] [pool-1-thread-11] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-10-04 01:23:08,793] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-10-04 01:23:11,121] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-10-04 01:23:11,224] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] [2024-10-04 01:23:11,690] [pool-1-thread-2] Initializing /data/melissa/annotation-test.tif: [testng] [2024-10-04 01:23:13,123] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-10-04 01:23:13,470] [pool-1-thread-5] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-10-04 01:23:14,399] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-10-04 01:23:14,669] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-10-04 01:23:14,974] [pool-1-thread-12] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-04 01:23:15,240] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3: [testng] [2024-10-04 01:23:15,539] [pool-1-thread-4] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-10-04 01:23:15,899] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-10-04 01:23:16,408] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-10-04 01:23:17,405] [pool-1-thread-6] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-10-04 01:23:19,263] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-10-04 01:23:21,109] [pool-1-thread-6] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-10-04 01:23:21,479] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-10-04 01:23:22,215] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-10-04 01:23:24,530] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-10-04 01:23:24,953] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-10-04 01:23:25,673] [pool-1-thread-4] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-10-04 01:23:25,812] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-10-04 01:23:26,121] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-10-04 01:23:26,434] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-10-04 01:23:26,762] [pool-1-thread-9] Initializing /data/jay/DMtest2.dm3: [testng] [2024-10-04 01:23:26,943] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-10-04 01:23:27,123] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-10-04 01:23:27,512] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-10-04 01:23:27,689] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-10-04 01:23:28,936] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-10-04 01:23:29,988] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-10-04 01:23:31,042] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-10-04 01:23:31,178] [pool-1-thread-4] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-10-04 01:23:31,312] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-10-04 01:23:31,971] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-10-04 01:23:32,337] [pool-1-thread-11] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-10-04 01:23:34,555] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-10-04 01:23:35,321] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-10-04 01:23:36,154] [pool-1-thread-3] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-10-04 01:23:36,985] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-04 01:23:38,304] [pool-1-thread-6] Initializing /data/ofra/lowloss.dm3: [testng] [2024-10-04 01:23:38,655] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-10-04 01:23:39,063] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-04 01:23:39,895] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-04 01:23:40,711] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3: [testng] [2024-10-04 01:23:40,868] [pool-1-thread-7] Initializing /data/jay/dnasample.tif: [testng] [2024-10-04 01:23:42,608] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 29 seconds Finished: SUCCESS