Started by upstream project "BIOFORMATS-test-repo" build number 209
originally caused by:
 Started by upstream project "Trigger" build number 235
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins10077304377184478804.sh
+ '[' psd = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_33241_merge_ci -v /uod/idr/repos/curated/psd:/data -v /uod/idr-scratch/merge-ci/curated/psd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 03:40:22,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:40:22,092 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 03:40:22,092 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:40:22,093 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:40:22,094 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:40:22,094 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:40:22,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:40:22,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:40:22,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:40:22,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:40:22,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:40:22,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:40:22,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:40:22,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:40:22,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:40:22,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:40:22,348 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:40:22,349 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:40:22,349 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:40:22,349 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:40:22,349 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 03:40:22,350 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 03:40:22,350 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 256 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-04 03:40:22,362] [main] java.version = 1.8.0_342
   [testng] 03:40:22,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:40:22,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:22,412 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-04_03-40-22.log]
   [testng] 03:40:22,413 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-10-04 03:40:22,415] [main] testng.directory = /data
   [testng] [2024-10-04 03:40:22,415] [main] testng.configDirectory = /config
   [testng] [2024-10-04 03:40:22,427] [main] testng.multiplier = 1.0
   [testng] [2024-10-04 03:40:22,428] [main] testng.in-memory = false
   [testng] [2024-10-04 03:40:22,428] [main] testng.allow-missing = false
   [testng] [2024-10-04 03:40:22,428] [main] user.language = en
   [testng] [2024-10-04 03:40:22,428] [main] user.country = ${user.country}
   [testng] [2024-10-04 03:40:22,428] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-10-04 03:40:23,140] [main] ----------------------------------------
   [testng] [2024-10-04 03:40:23,140] [main] Total files: 18
   [testng] [2024-10-04 03:40:23,140] [main] Scan time: 0.712 s (39 ms/file)
   [testng] [2024-10-04 03:40:23,140] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 18 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-04 03:40:28,689] [pool-1-thread-1] Initializing /data/ascb/thin&thick fill.2.psd: 
   [testng] 03:40:28,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:40:28,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:28,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-04_03-40-28.log]
   [testng] 03:40:28,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f82571b - End of configuration.
   [testng] [2024-10-04 03:40:28,927] [pool-1-thread-12] Initializing /data/ascb/607x.psd: 
   [testng] 03:40:28,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:40:28,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:28,929 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-04_03-40-28.log]
   [testng] 03:40:28,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7165a76e - End of configuration.
   [testng] [2024-10-04 03:40:29,208] [pool-1-thread-11] Initializing /data/misc/glossy_orbs.psd: 
   [testng] 03:40:29,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:40:29,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:29,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-04_03-40-29.log]
   [testng] 03:40:29,210 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7275992d - End of configuration.
   [testng] [2024-10-04 03:40:29,533] [pool-1-thread-10] Initializing /data/misc/glossy_buttons.psd: 
   [testng] 03:40:29,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:40:29,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:29,534 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-04_03-40-29.log]
   [testng] 03:40:29,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@221806e9 - End of configuration.
   [testng] [2024-10-04 03:40:29,853] [pool-1-thread-9] Initializing /data/jcb/Fig5A_sip1506h.tif: 
   [testng] 03:40:29,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:40:29,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:29,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-04_03-40-29.log]
   [testng] 03:40:29,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e81a693 - End of configuration.
   [testng] [2024-10-04 03:40:30,160] [pool-1-thread-8] Initializing /data/jcb/Fig5A_siHP16h.tif: 
   [testng] 03:40:30,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:40:30,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:30,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-04_03-40-30.log]
   [testng] 03:40:30,162 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1caccdda - End of configuration.
   [testng] [2024-10-04 03:40:30,448] [pool-1-thread-7] Initializing /data/misc/smilie.psd: 
   [testng] 03:40:30,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:40:30,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:30,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-04_03-40-30.log]
   [testng] 03:40:30,450 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48338d27 - End of configuration.
   [testng] [2024-10-04 03:40:30,739] [pool-1-thread-6] Initializing /data/simon/colour_separated_image.psd: 
   [testng] 03:40:30,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:40:30,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:30,740 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-04_03-40-30.log]
   [testng] 03:40:30,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@334027df - End of configuration.
   [testng] [2024-10-04 03:40:31,027] [pool-1-thread-5] Initializing /data/misc/venus_composite_8bit.psd: 
   [testng] 03:40:31,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:40:31,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:31,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-04_03-40-31.log]
   [testng] 03:40:31,029 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12ca35b8 - End of configuration.
   [testng] [2024-10-04 03:40:31,311] [pool-1-thread-4] Initializing /data/qa-4117/caspase gel-1.psd: 
   [testng] 03:40:31,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:40:31,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:31,312 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-04_03-40-31.log]
   [testng] 03:40:31,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@790f62d5 - End of configuration.
   [testng] [2024-10-04 03:40:31,631] [pool-1-thread-3] Initializing /data/big-images/8kx8k.psd: 
   [testng] 03:40:31,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:40:31,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:31,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-04_03-40-31.log]
   [testng] 03:40:31,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4067d2f5 - End of configuration.
   [testng] [2024-10-04 03:40:31,939] [pool-1-thread-2] Initializing /data/cris/house.tif: 
   [testng] 03:40:31,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:40:31,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:40:31,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-04_03-40-31.log]
   [testng] 03:40:31,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@333f9bd5 - End of configuration.
   [testng] [2024-10-04 03:40:37,339] [pool-1-thread-6] Initializing /data/jcb/Fig5A_sicont6h.tif: 
   [testng] [2024-10-04 03:40:37,628] [pool-1-thread-11] Initializing /data/ascb/423.psd: 
   [testng] [2024-10-04 03:40:37,955] [pool-1-thread-10] Initializing /data/misc/venus_composite.psd: 
   [testng] [2024-10-04 03:40:38,361] [pool-1-thread-7] Initializing /data/misc/vig_drawing_1.psd: 
   [testng] [2024-10-04 03:40:38,770] [pool-1-thread-8] Initializing /data/qa-4497/22421435_Supl Fig 4_C_Flag_12987.psd: 
   [testng] [2024-10-04 03:40:39,043] [pool-1-thread-9] Initializing /data/qa-7632/23283078__NA_NA_27343.psd: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 954, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 37 seconds
Finished: SUCCESS