Started by upstream project "BIOFORMATS-test-repo" build number 212
originally caused by:
Started by upstream project "Trigger" build number 238
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins13138513510733260523.sh
+ '[' picoquant = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_33670_merge_ci -v /uod/idr/repos/curated/picoquant:/data -v /uod/idr-scratch/merge-ci/curated/picoquant:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:22:18,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:22:18,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:22:18,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:22:18,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:22:18,529 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:22:18,529 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:22:18,530 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:22:18,530 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:22:18,530 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 02:22:18,531 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 02:22:18,531 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 1254 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-07 02:22:18,543] [main] java.version = 1.8.0_342
[testng] 02:22:18,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:22:18,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:18,643 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-07_02-22-18.log]
[testng] 02:22:18,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-10-07 02:22:18,647] [main] testng.directory = /data
[testng] [2024-10-07 02:22:18,648] [main] testng.configDirectory = /config
[testng] [2024-10-07 02:22:18,736] [main] testng.multiplier = 1.0
[testng] [2024-10-07 02:22:18,736] [main] testng.in-memory = false
[testng] [2024-10-07 02:22:18,737] [main] testng.allow-missing = false
[testng] [2024-10-07 02:22:18,737] [main] user.language = fr
[testng] [2024-10-07 02:22:18,737] [main] user.country = FR
[testng] [2024-10-07 02:22:18,737] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-10-07 02:22:22,182] [main] ----------------------------------------
[testng] [2024-10-07 02:22:22,183] [main] Total files: 8
[testng] [2024-10-07 02:22:22,183] [main] Scan time: 3.445 s (430 ms/file)
[testng] [2024-10-07 02:22:22,183] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 8 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-07 02:22:24,981] [pool-1-thread-1] Initializing /data/neil/PollenGrainsSymPhoTime.png:
[testng] 02:22:24,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:22:24,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:24,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-07_02-22-24.log]
[testng] 02:22:24,983 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ef1e337 - End of configuration.
[testng] [2024-10-07 02:22:25,009] [pool-1-thread-8] Initializing /data/qa-9505/CENP-labelled_cells_for_FRET.bin:
[testng] 02:22:25,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:22:25,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:25,010 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-07_02-22-25.log]
[testng] 02:22:25,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e1ba1ff - End of configuration.
[testng] [2024-10-07 02:22:25,353] [pool-1-thread-7] Initializing /data/qa-9434/DaisyPollen.bin:
[testng] 02:22:25,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:22:25,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:25,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-07_02-22-25.log]
[testng] 02:22:25,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b752e4 - End of configuration.
[testng] [2024-10-07 02:22:25,816] [pool-1-thread-6] Initializing /data/qa-17095/IRF_256.bin:
[testng] 02:22:25,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:22:25,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:25,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-07_02-22-25.log]
[testng] 02:22:25,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@454507c4 - End of configuration.
[testng] [2024-10-07 02:22:26,483] [pool-1-thread-5] Initializing /data/qa-17134/VLDLR_mGFP_with_ligand.bin:
[testng] 02:22:26,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:22:26,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:26,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-07_02-22-26.log]
[testng] 02:22:26,484 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2df94958 - End of configuration.
[testng] [2024-10-07 02:22:27,364] [pool-1-thread-4] Initializing /data/neil/PollenGrains.bmp:
[testng] 02:22:27,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:22:27,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:27,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-07_02-22-27.log]
[testng] 02:22:27,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33e7ffb8 - End of configuration.
[testng] [2024-10-07 02:22:27,536] [pool-1-thread-3] Initializing /data/neil/PollenGrains.bin:
[testng] 02:22:27,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:22:27,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:27,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-07_02-22-27.log]
[testng] 02:22:27,538 |-INFO in ch.qos.logback.core.sift.SiftProcessor@205ca225 - End of configuration.
[testng] [2024-10-07 02:22:28,124] [pool-1-thread-2] Initializing /data/qa-9505/GFP_and_mRFP_FRET.bin:
[testng] 02:22:28,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:22:28,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:28,125 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-07_02-22-28.log]
[testng] 02:22:28,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@777111c7 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 424, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 31 seconds
Finished: SUCCESS