Started by upstream project "BIOFORMATS-test-repo" build number 212
originally caused by:
Started by upstream project "Trigger" build number 238
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins8606522804980422767.sh
+ '[' mrw = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_33695_merge_ci -v /uod/idr/repos/curated/mrw:/data -v /uod/idr-scratch/merge-ci/curated/mrw:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:50:19,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:50:19,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:50:19,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:50:19,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:50:19,301 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:50:19,301 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:50:19,301 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:50:19,302 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:50:19,302 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 02:50:19,302 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 02:50:19,303 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 1118 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-07 02:50:19,312] [main] java.version = 1.8.0_342
[testng] 02:50:19,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:50:19,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:19,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-07_02-50-19.log]
[testng] 02:50:19,362 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-10-07 02:50:19,364] [main] testng.directory = /data
[testng] [2024-10-07 02:50:19,364] [main] testng.configDirectory = /config
[testng] [2024-10-07 02:50:19,377] [main] testng.multiplier = 1.0
[testng] [2024-10-07 02:50:19,378] [main] testng.in-memory = false
[testng] [2024-10-07 02:50:19,378] [main] testng.allow-missing = false
[testng] [2024-10-07 02:50:19,378] [main] user.language = fr
[testng] [2024-10-07 02:50:19,378] [main] user.country = FR
[testng] [2024-10-07 02:50:19,378] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-10-07 02:50:20,290] [main] ----------------------------------------
[testng] [2024-10-07 02:50:20,290] [main] Total files: 19
[testng] [2024-10-07 02:50:20,290] [main] Scan time: 0.912 s (48 ms/file)
[testng] [2024-10-07 02:50:20,290] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 19 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-07 02:50:27,563] [pool-1-thread-1] Initializing /data/samples/05-Sep-22_statua_0837.mrw:
[testng] 02:50:27,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:50:27,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:27,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-07_02-50-27.log]
[testng] 02:50:27,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@684687d9 - End of configuration.
[testng] [2024-10-07 02:50:27,976] [pool-1-thread-12] Initializing /data/samples/05-Aug-21_duperele_0353.mrw:
[testng] 02:50:27,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:50:27,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:27,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-07_02-50-27.log]
[testng] 02:50:27,978 |-INFO in ch.qos.logback.core.sift.SiftProcessor@718efea - End of configuration.
[testng] [2024-10-07 02:50:28,377] [pool-1-thread-11] Initializing /data/samples/05-Sep-11_nyc_swiatla_0612.mrw:
[testng] 02:50:28,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:50:28,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:28,378 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-07_02-50-28.log]
[testng] 02:50:28,379 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e10a14e - End of configuration.
[testng] [2024-10-07 02:50:28,765] [pool-1-thread-10] Initializing /data/samples/05-Aug-17_manhatan_0321.mrw:
[testng] 02:50:28,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:50:28,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:28,766 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-07_02-50-28.log]
[testng] 02:50:28,767 |-INFO in ch.qos.logback.core.sift.SiftProcessor@719561d4 - End of configuration.
[testng] [2024-10-07 02:50:29,394] [pool-1-thread-9] Initializing /data/samples/3200R PICT0006.MRW:
[testng] 02:50:29,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:50:29,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:29,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-07_02-50-29.log]
[testng] 02:50:29,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7696418d - End of configuration.
[testng] [2024-10-07 02:50:29,660] [pool-1-thread-8] Initializing /data/samples/05-Sep-03_duperele_0472.mrw:
[testng] 02:50:29,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:50:29,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:29,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-07_02-50-29.log]
[testng] 02:50:29,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e9edab5 - End of configuration.
[testng] [2024-10-07 02:50:30,041] [pool-1-thread-7] Initializing /data/samples/05-Aug-17_bokeh_0215_400.mrw:
[testng] 02:50:30,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:50:30,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:30,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-07_02-50-30.log]
[testng] 02:50:30,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a770581 - End of configuration.
[testng] [2024-10-07 02:50:30,486] [pool-1-thread-6] Initializing /data/samples/05-Sep-10_nyc_swiatla_0584.mrw:
[testng] 02:50:30,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:50:30,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:30,487 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-07_02-50-30.log]
[testng] 02:50:30,488 |-INFO in ch.qos.logback.core.sift.SiftProcessor@684d5052 - End of configuration.
[testng] [2024-10-07 02:50:30,869] [pool-1-thread-5] Initializing /data/samples/05-Sep-07_nyc_0531.mrw:
[testng] 02:50:30,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:50:30,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:30,870 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-07_02-50-30.log]
[testng] 02:50:30,870 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19510582 - End of configuration.
[testng] [2024-10-07 02:50:31,283] [pool-1-thread-4] Initializing /data/samples/05-Aug-17_bokeh_0214_400.mrw:
[testng] 02:50:31,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:50:31,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:31,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-07_02-50-31.log]
[testng] 02:50:31,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@250dad73 - End of configuration.
[testng] [2024-10-07 02:50:31,790] [pool-1-thread-3] Initializing /data/samples/200R PICT0002.MRW:
[testng] 02:50:31,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:50:31,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:31,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-07_02-50-31.log]
[testng] 02:50:31,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6843df60 - End of configuration.
[testng] [2024-10-07 02:50:32,192] [pool-1-thread-2] Initializing /data/samples/05-Sep-11_nyc_swiatla_0619.mrw:
[testng] 02:50:32,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:50:32,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:32,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-07_02-50-32.log]
[testng] 02:50:32,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e4886a3 - End of configuration.
[testng] [2024-10-07 02:50:42,296] [pool-1-thread-11] Initializing /data/samples/400R PICT0003.MRW:
[testng] [2024-10-07 02:50:42,613] [pool-1-thread-1] Initializing /data/samples/05-Sep-22_statua_0818.mrw:
[testng] [2024-10-07 02:50:42,947] [pool-1-thread-3] Initializing /data/samples/05-Sep-14_sigma_0698.mrw:
[testng] [2024-10-07 02:50:43,288] [pool-1-thread-9] Initializing /data/samples/1600R PICT0005.MRW:
[testng] [2024-10-07 02:50:43,622] [pool-1-thread-5] Initializing /data/samples/100R PICT0001.MRW:
[testng] [2024-10-07 02:50:44,009] [pool-1-thread-6] Initializing /data/samples/05-Sep-22_statua_0800.mrw:
[testng] [2024-10-07 02:50:44,363] [pool-1-thread-10] Initializing /data/samples/800R PICT0010.MRW:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1007, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 41 seconds
Finished: SUCCESS