Started by upstream project "BIOFORMATS-test-repo" build number 214 originally caused by: Started by upstream project "Trigger" build number 241 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins8901592619672120691.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33970_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 09:09:00,977 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 09:09:00,979 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 09:09:00,979 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 09:09:00,980 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 09:09:00,980 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 09:09:00,981 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 09:09:00,981 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 09:09:00,981 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 09:09:00,981 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 09:09:00,982 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 09:09:00,982 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 09:09:00,983 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 09:09:01,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 09:09:01,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 09:09:01,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 09:09:01,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 09:09:01,175 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 09:09:01,175 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 09:09:01,175 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 09:09:01,175 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 09:09:01,175 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 09:09:01,176 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 09:09:01,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-08 09:09:01,185] [main] java.version = 11.0.16 [testng] 09:09:01,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 09:09:01,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:09:01,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-08_09-09-01.log] [testng] 09:09:01,232 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-08 09:09:01,234] [main] testng.directory = /data [testng] [2024-10-08 09:09:01,234] [main] testng.configDirectory = /config [testng] [2024-10-08 09:09:01,244] [main] testng.multiplier = 1.0 [testng] [2024-10-08 09:09:01,245] [main] testng.in-memory = false [testng] [2024-10-08 09:09:01,245] [main] testng.allow-missing = false [testng] [2024-10-08 09:09:01,246] [main] user.language = en [testng] [2024-10-08 09:09:01,246] [main] user.country = ${user.country} [testng] [2024-10-08 09:09:01,246] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-08 09:09:31,947] [main] ---------------------------------------- [testng] [2024-10-08 09:09:31,948] [main] Total files: 259 [testng] [2024-10-08 09:09:31,948] [main] Scan time: 30.701 s (118 ms/file) [testng] [2024-10-08 09:09:31,948] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-08 09:17:49,891] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] 09:17:49,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 09:17:49,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:49,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-08_09-17-49.log] [testng] 09:17:49,894 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e04933f - End of configuration. [testng] [2024-10-08 09:17:50,368] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib: [testng] 09:17:50,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 09:17:50,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:50,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-08_09-17-50.log] [testng] 09:17:50,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25d5bb61 - End of configuration. [testng] [2024-10-08 09:17:50,761] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 09:17:50,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 09:17:50,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:50,762 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-08_09-17-50.log] [testng] 09:17:50,762 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6461a6f2 - End of configuration. [testng] [2024-10-08 09:17:51,305] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] 09:17:51,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 09:17:51,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:51,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-08_09-17-51.log] [testng] 09:17:51,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@462de449 - End of configuration. [testng] [2024-10-08 09:17:52,777] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] 09:17:52,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 09:17:52,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:52,778 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-08_09-17-52.log] [testng] 09:17:52,778 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fcc396d - End of configuration. [testng] [2024-10-08 09:17:52,811] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] 09:17:52,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 09:17:52,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:52,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-08_09-17-52.log] [testng] 09:17:52,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8c073e8 - End of configuration. [testng] [2024-10-08 09:17:52,969] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] 09:17:52,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 09:17:52,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:52,970 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-08_09-17-52.log] [testng] 09:17:52,971 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72a9773 - End of configuration. [testng] [2024-10-08 09:17:53,396] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] 09:17:53,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 09:17:53,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:53,397 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-08_09-17-53.log] [testng] 09:17:53,398 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4516e0a0 - End of configuration. [testng] [2024-10-08 09:17:53,809] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] 09:17:53,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 09:17:53,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:53,810 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-08_09-17-53.log] [testng] 09:17:53,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28a02d68 - End of configuration. [testng] [2024-10-08 09:17:59,559] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] 09:17:59,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 09:17:59,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:59,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-08_09-17-59.log] [testng] 09:17:59,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c3689f3 - End of configuration. [testng] [2024-10-08 09:17:59,747] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] 09:17:59,747 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 09:17:59,747 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:59,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-08_09-17-59.log] [testng] 09:17:59,748 |-INFO in ch.qos.logback.core.sift.SiftProcessor@601672eb - End of configuration. [testng] [2024-10-08 09:17:59,971] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib: [testng] 09:17:59,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 09:17:59,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:59,972 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-08_09-17-59.log] [testng] 09:17:59,972 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44238dc4 - End of configuration. [testng] [2024-10-08 09:18:02,554] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-08 09:18:02,919] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-10-08 09:18:03,941] [pool-1-thread-8] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-08 09:18:09,240] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-08 09:18:09,521] [pool-1-thread-3] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-08 09:18:09,928] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-08 09:18:10,414] [pool-1-thread-11] Initializing /data/glen/simulstack.oib: [testng] [2024-10-08 09:18:10,890] [pool-1-thread-7] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-08 09:18:11,322] [pool-1-thread-6] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-08 09:18:13,403] [pool-1-thread-12] Initializing /data/david/Image0016.oif: [testng] [2024-10-08 09:18:14,167] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-08 09:18:17,458] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-08 09:18:19,325] [pool-1-thread-11] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-08 09:18:19,963] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-08 09:18:20,306] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-08 09:18:20,630] [pool-1-thread-6] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-08 09:18:21,191] [pool-1-thread-4] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-08 09:18:23,007] [pool-1-thread-10] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-08 09:18:23,945] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-08 09:18:24,147] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-08 09:18:24,795] [pool-1-thread-7] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-08 09:18:33,390] [pool-1-thread-11] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-08 09:18:47,160] [pool-1-thread-6] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-08 09:18:48,070] [pool-1-thread-4] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-08 09:18:49,539] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-08 09:18:50,530] [pool-1-thread-10] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-08 09:18:53,578] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-08 09:18:58,236] [pool-1-thread-1] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-08 09:19:45,791] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-08 09:20:04,016] [pool-1-thread-12] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-08 09:21:16,531] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-08 09:21:20,178] [pool-1-thread-3] Initializing /data/allan/62909#1.oib: [testng] [2024-10-08 09:21:20,653] [pool-1-thread-10] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-08 09:21:26,025] [pool-1-thread-3] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-08 09:21:37,545] [pool-1-thread-6] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-08 09:21:41,264] [pool-1-thread-6] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-08 09:23:31,520] [pool-1-thread-12] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-08 09:23:34,441] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-08 09:24:18,296] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-08 09:24:23,973] [pool-1-thread-12] Initializing /data/jae/Image0001.oib: [testng] [2024-10-08 09:24:29,048] [pool-1-thread-12] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-08 09:25:08,004] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-08 09:25:14,517] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-08 09:26:14,531] [pool-1-thread-12] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-08 09:26:20,591] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-10-08 09:26:25,525] [pool-1-thread-12] Initializing /data/simon/never_worked.oib: [testng] [2024-10-08 09:26:31,123] [pool-1-thread-12] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-08 09:26:58,459] [pool-1-thread-12] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-08 09:27:04,489] [pool-1-thread-12] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-08 09:27:10,553] [pool-1-thread-12] Initializing /data/johannes/step1.bmp: [testng] [2024-10-08 09:27:13,247] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-08 09:27:20,634] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-08 09:27:26,299] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-08 09:28:02,606] [pool-1-thread-12] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-08 09:28:10,204] [pool-1-thread-12] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-08 09:33:32,411] [pool-1-thread-2] Initializing /data/glen/111407.oif: [testng] [2024-10-08 09:39:12,832] [pool-1-thread-8] Initializing /data/brian/FLIP.oib: [testng] [2024-10-08 09:39:19,587] [pool-1-thread-8] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-08 09:39:31,202] [pool-1-thread-8] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-08 09:39:31,857] [pool-1-thread-10] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-08 09:39:37,133] [pool-1-thread-10] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-08 09:39:38,018] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-08 09:39:44,224] [pool-1-thread-8] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-08 09:40:30,415] [pool-1-thread-10] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-08 09:40:36,154] [pool-1-thread-10] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-08 09:40:42,014] [pool-1-thread-10] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-08 09:43:01,160] [pool-1-thread-12] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-08 09:43:08,557] [pool-1-thread-12] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-08 09:43:42,296] [pool-1-thread-4] Initializing /data/christian/20min.oif: [testng] [2024-10-08 09:43:43,669] [pool-1-thread-12] Initializing /data/marc/V0606L.oib: [testng] [2024-10-08 09:44:03,078] [pool-1-thread-12] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-08 09:44:26,730] [pool-1-thread-4] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-08 09:45:33,608] [pool-1-thread-4] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-08 09:45:37,667] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-08 09:45:44,406] [pool-1-thread-4] Initializing /data/aryeh/1h.oib: [testng] [2024-10-08 09:45:56,170] [pool-1-thread-4] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-08 09:46:05,819] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-08 09:48:24,470] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-08 09:48:27,865] [pool-1-thread-9] Initializing /data/david/Image0016.oib: [testng] [2024-10-08 09:48:35,715] [pool-1-thread-9] Initializing /data/monica/Image0056.oif: [testng] [2024-10-08 09:48:40,274] [pool-1-thread-3] Initializing /data/glen/Image0002.oif: [testng] [2024-10-08 09:49:59,058] [pool-1-thread-9] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-08 09:50:07,379] [pool-1-thread-9] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-08 09:50:16,382] [pool-1-thread-9] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-08 09:50:48,052] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-08 09:50:58,134] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-08 09:51:15,324] [pool-1-thread-9] Initializing /data/johannes/step3.bmp: [testng] [2024-10-08 09:51:20,638] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-08 09:56:07,462] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-08 09:56:14,510] [pool-1-thread-7] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-08 09:56:22,726] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-08 09:56:24,293] [pool-1-thread-2] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-08 09:56:31,427] [pool-1-thread-2] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-08 09:56:33,630] [pool-1-thread-7] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-08 09:56:53,368] [pool-1-thread-2] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-08 09:57:28,239] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-08 09:57:36,339] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-08 09:58:57,924] [pool-1-thread-12] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-08 09:59:04,174] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-08 09:59:10,657] [pool-1-thread-12] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-08 09:59:17,891] [pool-1-thread-12] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-08 09:59:24,820] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-08 10:03:09,431] [pool-1-thread-4] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-08 10:05:34,695] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-08 10:05:40,883] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-08 10:05:45,084] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-08 10:05:52,983] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-08 10:06:05,705] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-08 10:06:15,175] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-08 10:06:24,367] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-10-08 10:06:30,766] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-08 10:06:38,485] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2024-10-08 10:06:41,627] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-08 10:10:18,903] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-08 10:10:28,611] [pool-1-thread-11] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-08 10:10:37,499] [pool-1-thread-11] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-10-08 10:11:36,360] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-08 10:11:43,648] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-08 10:11:52,239] [pool-1-thread-11] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-08 10:11:58,228] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-08 10:12:04,289] [pool-1-thread-11] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-08 10:12:10,780] [pool-1-thread-11] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-08 10:12:31,529] [pool-1-thread-8] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-08 10:13:09,708] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-08 10:13:17,057] [pool-1-thread-3] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-08 10:13:43,054] [pool-1-thread-11] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-08 10:13:50,280] [pool-1-thread-8] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-08 10:13:51,608] [pool-1-thread-11] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-08 10:14:03,253] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-08 10:14:10,199] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-08 10:14:12,534] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-08 10:14:20,991] [pool-1-thread-8] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 12:55:41,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:55:41,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:55:41,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-08_12-55-41.log] [testng] 12:55:41,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72cc51ac - End of configuration. [testng] 14:48:08,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 14:48:08,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:48:08,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-08_14-48-08.log] [testng] 14:48:08,561 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7716c81b - End of configuration. [testng] 16:38:30,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 16:38:30,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:38:30,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-08_16-38-30.log] [testng] 16:38:30,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2921089c - End of configuration. Build was aborted Calling Pipeline was cancelled Finished: ABORTED