Started by upstream project "BIOFORMATS-test-repo" build number 217 originally caused by: Started by upstream project "Trigger" build number 244 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins17435085949631115197.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34370_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:35:55,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:35:55,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:35:55,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:35:55,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:35:55,359 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:35:55,359 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:35:55,359 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:35:55,360 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:35:55,360 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1139b2f3 - End of configuration. [testng] 01:35:55,367 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@3f197a46 - Registering current configuration as safe fallback point [testng] 01:35:55,368 |-INFO in ch.qos.logback.classic.util.ContextInitializer@636be97c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 577 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-11 01:35:55,381] [main] java.version = 1.8.0_342 [testng] 01:35:55,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:35:55,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:55,563 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-11_01-35-55.log] [testng] 01:35:55,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-11 01:35:55,568] [main] testng.directory = /data [testng] [2024-10-11 01:35:55,568] [main] testng.configDirectory = /config [testng] [2024-10-11 01:35:55,581] [main] testng.multiplier = 1.0 [testng] [2024-10-11 01:35:55,581] [main] testng.in-memory = false [testng] [2024-10-11 01:35:55,582] [main] testng.allow-missing = false [testng] [2024-10-11 01:35:55,582] [main] user.language = en [testng] [2024-10-11 01:35:55,582] [main] user.country = ${user.country} [testng] [2024-10-11 01:35:55,582] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-11 01:36:17,399] [main] ---------------------------------------- [testng] [2024-10-11 01:36:17,399] [main] Total files: 103 [testng] [2024-10-11 01:36:17,400] [main] Scan time: 21.817 s (211 ms/file) [testng] [2024-10-11 01:36:17,400] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-11 01:37:01,180] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 01:37:01,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:37:01,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:01,182 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-11_01-37-01.log] [testng] 01:37:01,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f32c4c4 - End of configuration. [testng] [2024-10-11 01:37:01,335] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] 01:37:01,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:37:01,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:01,336 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-11_01-37-01.log] [testng] 01:37:01,336 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6eaa6558 - End of configuration. [testng] [2024-10-11 01:37:01,453] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] 01:37:01,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:37:01,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:01,454 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-11_01-37-01.log] [testng] 01:37:01,454 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a6518b5 - End of configuration. [testng] [2024-10-11 01:37:01,567] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 01:37:01,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:37:01,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:01,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-11_01-37-01.log] [testng] 01:37:01,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d934119 - End of configuration. [testng] [2024-10-11 01:37:02,097] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 01:37:02,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:37:02,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:02,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-11_01-37-02.log] [testng] 01:37:02,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f1d473f - End of configuration. [testng] [2024-10-11 01:37:02,179] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] 01:37:02,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:37:02,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:02,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-11_01-37-02.log] [testng] 01:37:02,181 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f366983 - End of configuration. [testng] [2024-10-11 01:37:03,029] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] 01:37:03,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:37:03,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:03,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-11_01-37-03.log] [testng] 01:37:03,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@596bf3f1 - End of configuration. [testng] [2024-10-11 01:37:03,076] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 01:37:03,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:37:03,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:03,076 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-11_01-37-03.log] [testng] 01:37:03,077 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b63b2df - End of configuration. [testng] [2024-10-11 01:37:03,167] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] 01:37:03,167 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:37:03,167 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:03,168 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-11_01-37-03.log] [testng] 01:37:03,168 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50c25c5f - End of configuration. [testng] [2024-10-11 01:37:03,323] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3: [testng] 01:37:03,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:37:03,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:03,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-11_01-37-03.log] [testng] 01:37:03,324 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73c52f73 - End of configuration. [testng] [2024-10-11 01:37:03,458] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] 01:37:03,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:37:03,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:03,459 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-11_01-37-03.log] [testng] 01:37:03,459 |-INFO in ch.qos.logback.core.sift.SiftProcessor@508139fd - End of configuration. [testng] [2024-10-11 01:37:03,832] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3: [testng] 01:37:03,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:37:03,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:37:03,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-11_01-37-03.log] [testng] 01:37:03,833 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d6c16a3 - End of configuration. [testng] [2024-10-11 01:37:08,172] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-10-11 01:37:08,271] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-10-11 01:37:08,415] [pool-1-thread-7] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-10-11 01:37:09,073] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-10-11 01:37:09,923] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-10-11 01:37:11,515] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-10-11 01:37:11,643] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-11 01:37:12,595] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-10-11 01:37:12,686] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-10-11 01:37:12,781] [pool-1-thread-10] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-10-11 01:37:12,985] [pool-1-thread-9] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-10-11 01:37:13,877] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-10-11 01:37:14,053] [pool-1-thread-8] Initializing /data/ofra/lowloss.dm3: [testng] [2024-10-11 01:37:16,234] [pool-1-thread-10] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-10-11 01:37:16,358] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-10-11 01:37:16,440] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-10-11 01:37:17,533] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-10-11 01:37:18,059] [pool-1-thread-8] Initializing /data/jay/DMtest2.dm3: [testng] [2024-10-11 01:37:19,010] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-10-11 01:37:19,273] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-10-11 01:37:19,971] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-10-11 01:37:20,150] [pool-1-thread-9] Initializing /data/qa-7642/8.dm4: [testng] [2024-10-11 01:37:20,293] [pool-1-thread-3] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-10-11 01:37:20,502] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-10-11 01:37:22,827] [pool-1-thread-6] Initializing /data/melissa/annotation-test.tif: [testng] [2024-10-11 01:37:24,445] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-10-11 01:37:24,553] [pool-1-thread-7] Initializing /data/qa-21761/example.dm4: [testng] [2024-10-11 01:37:25,511] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-10-11 01:37:26,009] [pool-1-thread-11] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-10-11 01:37:26,607] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-10-11 01:37:28,470] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-10-11 01:37:29,445] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-10-11 01:37:30,730] [pool-1-thread-7] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-10-11 01:37:31,163] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-10-11 01:37:31,431] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-10-11 01:37:34,249] [pool-1-thread-12] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-10-11 01:37:35,374] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-10-11 01:37:35,773] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-10-11 01:37:36,168] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-10-11 01:37:36,703] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-11 01:37:38,328] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-10-11 01:37:39,295] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-10-11 01:37:39,928] [pool-1-thread-7] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-10-11 01:37:40,395] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3: [testng] [2024-10-11 01:37:40,648] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-10-11 01:37:40,837] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-10-11 01:37:41,413] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-11 01:37:43,125] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-10-11 01:37:43,904] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-10-11 01:37:45,699] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-10-11 01:37:45,877] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-10-11 01:37:46,302] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-11 01:37:48,084] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-10-11 01:37:49,180] [pool-1-thread-7] Initializing /data/samples/test-tiles.dm3: [testng] [2024-10-11 01:37:50,095] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-10-11 01:37:50,531] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-10-11 01:37:51,785] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-11 01:37:53,087] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-10-11 01:37:54,253] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-10-11 01:37:54,451] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-10-11 01:37:54,591] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-10-11 01:37:54,773] [pool-1-thread-5] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-10-11 01:37:58,453] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-10-11 01:37:59,079] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-11 01:37:59,344] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-10-11 01:38:00,824] [pool-1-thread-9] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-10-11 01:38:02,406] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-10-11 01:38:02,781] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-10-11 01:38:03,766] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-10-11 01:38:03,956] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-11 01:38:04,999] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-10-11 01:38:05,284] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-10-11 01:38:06,734] [pool-1-thread-7] Initializing /data/jay/DMtest.dm3: [testng] [2024-10-11 01:38:07,069] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-10-11 01:38:07,572] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-10-11 01:38:07,959] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-10-11 01:38:08,986] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-10-11 01:38:10,310] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-10-11 01:38:10,460] [pool-1-thread-10] Initializing /data/jay/dnasample.tif: [testng] [2024-10-11 01:38:11,982] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-10-11 01:38:14,069] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-10-11 01:38:14,539] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-10-11 01:38:16,291] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-10-11 01:38:18,730] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-10-11 01:38:21,127] [pool-1-thread-2] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-10-11 01:38:21,569] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 44 seconds Finished: SUCCESS