Started by upstream project "BIOFORMATS-test-repo" build number 218 originally caused by: Started by upstream project "Trigger" build number 245 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins3815210683981292788.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34574_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:08:01,032 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:08:01,034 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 02:08:01,034 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:08:01,035 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:08:01,036 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:08:01,036 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:08:01,037 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:08:01,037 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:08:01,037 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:08:01,038 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:08:01,038 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:08:01,038 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:08:01,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:08:01,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:08:01,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:08:01,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:08:01,263 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:08:01,263 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:08:01,263 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:08:01,264 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:08:01,264 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 02:08:01,265 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 02:08:01,265 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 228 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-12 02:08:01,279] [main] java.version = 11.0.16 [testng] 02:08:01,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:08:01,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:08:01,336 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-12_02-08-01.log] [testng] 02:08:01,338 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-12 02:08:01,340] [main] testng.directory = /data [testng] [2024-10-12 02:08:01,341] [main] testng.configDirectory = /config [testng] [2024-10-12 02:08:01,351] [main] testng.multiplier = 1.0 [testng] [2024-10-12 02:08:01,352] [main] testng.in-memory = false [testng] [2024-10-12 02:08:01,353] [main] testng.allow-missing = false [testng] [2024-10-12 02:08:01,353] [main] user.language = en [testng] [2024-10-12 02:08:01,353] [main] user.country = ${user.country} [testng] [2024-10-12 02:08:01,353] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-12 02:10:10,158] [main] ---------------------------------------- [testng] [2024-10-12 02:10:10,158] [main] Total files: 259 [testng] [2024-10-12 02:10:10,158] [main] Scan time: 128.805 s (497 ms/file) [testng] [2024-10-12 02:10:10,158] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-12 03:22:48,282] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] 03:22:48,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:22:48,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:22:48,285 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-12_03-22-48.log] [testng] 03:22:48,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26d29151 - End of configuration. [testng] [2024-10-12 03:22:49,669] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib: [testng] 03:22:49,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:22:49,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:22:49,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-12_03-22-49.log] [testng] 03:22:49,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@171bf1a6 - End of configuration. [testng] [2024-10-12 03:22:52,654] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 03:22:52,654 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:22:52,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:22:52,655 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-12_03-22-52.log] [testng] 03:22:52,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b822353 - End of configuration. [testng] [2024-10-12 03:22:55,017] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] 03:22:55,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:22:55,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:22:55,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-12_03-22-55.log] [testng] 03:22:55,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55260ff0 - End of configuration. [testng] [2024-10-12 03:22:58,736] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] 03:22:58,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:22:58,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:22:58,737 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-12_03-22-58.log] [testng] 03:22:58,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5eb604d5 - End of configuration. [testng] [2024-10-12 03:22:59,711] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] 03:22:59,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:22:59,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:22:59,712 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-12_03-22-59.log] [testng] 03:22:59,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a059d0a - End of configuration. [testng] [2024-10-12 03:23:02,500] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] 03:23:02,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:23:02,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:02,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-12_03-23-02.log] [testng] 03:23:02,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4171261f - End of configuration. [testng] [2024-10-12 03:23:04,560] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] 03:23:04,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:23:04,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:04,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-12_03-23-04.log] [testng] 03:23:04,561 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d1b1be1 - End of configuration. [testng] [2024-10-12 03:23:07,990] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] 03:23:07,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:23:07,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:07,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-12_03-23-07.log] [testng] 03:23:07,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@451fb63b - End of configuration. [testng] [2024-10-12 03:27:25,394] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] 03:27:25,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:27:25,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:25,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-12_03-27-25.log] [testng] 03:27:25,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2be88d96 - End of configuration. [testng] [2024-10-12 03:27:34,838] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] 03:27:34,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:27:34,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:34,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-12_03-27-34.log] [testng] 03:27:34,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d6a0c6c - End of configuration. [testng] [2024-10-12 03:27:35,788] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib: [testng] 03:27:35,788 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:27:35,788 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:35,788 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-12_03-27-35.log] [testng] 03:27:35,789 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2799cbce - End of configuration. [testng] [2024-10-12 03:27:48,013] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-12 03:27:57,973] [pool-1-thread-8] Initializing /data/glen/simulstack.oif: [testng] [2024-10-12 03:28:31,787] [pool-1-thread-2] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-12 03:30:03,586] [pool-1-thread-1] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-12 03:30:06,170] [pool-1-thread-3] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-12 03:30:08,755] [pool-1-thread-12] Initializing /data/glen/simulstack.oib: [testng] [2024-10-12 03:30:11,215] [pool-1-thread-11] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-12 03:30:13,000] [pool-1-thread-7] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-12 03:30:15,296] [pool-1-thread-6] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-12 03:30:21,360] [pool-1-thread-10] Initializing /data/david/Image0016.oif: [testng] [2024-10-12 03:30:30,490] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-12 03:31:05,484] [pool-1-thread-11] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-12 03:31:08,465] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-12 03:31:11,664] [pool-1-thread-12] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-12 03:31:14,825] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-12 03:31:19,620] [pool-1-thread-6] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-12 03:31:23,545] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-12 03:31:35,639] [pool-1-thread-3] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-12 03:31:38,543] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-12 03:31:47,214] [pool-1-thread-1] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-12 03:31:48,464] [pool-1-thread-4] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-12 03:34:13,674] [pool-1-thread-7] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-12 03:34:22,197] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-12 03:36:53,540] [pool-1-thread-11] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-12 03:37:07,569] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-12 03:37:23,053] [pool-1-thread-11] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-12 03:37:34,085] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-12 03:37:47,482] [pool-1-thread-1] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-12 03:47:07,276] [pool-1-thread-3] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-12 03:49:29,595] [pool-1-thread-10] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-12 04:01:50,229] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-12 04:02:06,030] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2024-10-12 04:02:08,535] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-12 04:02:36,121] [pool-1-thread-7] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-12 04:03:30,733] [pool-1-thread-6] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-12 04:03:45,465] [pool-1-thread-6] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-12 04:12:43,198] [pool-1-thread-10] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-12 04:13:04,270] [pool-1-thread-10] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-12 04:17:11,318] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-12 04:17:31,216] [pool-1-thread-10] Initializing /data/jae/Image0001.oib: [testng] [2024-10-12 04:17:50,853] [pool-1-thread-10] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-12 04:19:56,570] [pool-1-thread-10] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-12 04:20:11,973] [pool-1-thread-10] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-12 04:23:08,442] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-12 04:23:21,964] [pool-1-thread-10] Initializing /data/michael/CELL3.oib: [testng] [2024-10-12 04:23:35,363] [pool-1-thread-10] Initializing /data/simon/never_worked.oib: [testng] [2024-10-12 04:23:54,692] [pool-1-thread-10] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-12 04:24:28,618] [pool-1-thread-10] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-12 04:24:40,961] [pool-1-thread-10] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-12 04:24:53,035] [pool-1-thread-10] Initializing /data/johannes/step1.bmp: [testng] [2024-10-12 04:24:57,353] [pool-1-thread-10] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-12 04:25:10,029] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-12 04:25:22,791] [pool-1-thread-10] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-12 04:26:53,656] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-12 04:27:12,687] [pool-1-thread-10] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-12 04:40:08,576] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] 04:48:45,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:48:45,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:48:45,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-12_04-48-45.log] [testng] 04:48:45,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7df9f054 - End of configuration. [testng] [2024-10-12 04:52:59,539] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-10-12 04:53:09,438] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-12 04:53:20,030] [pool-1-thread-2] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-12 04:53:27,101] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-12 04:53:34,732] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-12 04:54:38,792] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-12 04:54:52,611] [pool-1-thread-11] Initializing /data/molly/11OCT8.OIF: [testng] 04:55:19,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:55:19,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:55:19,466 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-12_04-55-19.log] [testng] 04:55:19,466 |-INFO in ch.qos.logback.core.sift.SiftProcessor@301c3bd3 - End of configuration. [testng] [2024-10-12 04:55:41,944] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-12 04:55:53,852] [pool-1-thread-2] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-12 04:56:05,739] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: [testng] 05:05:13,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 05:05:13,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:05:13,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-12_05-05-13.log] [testng] 05:05:13,959 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2da3d9ab - End of configuration. [testng] [2024-10-12 05:07:07,524] [pool-1-thread-10] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-12 05:07:29,959] [pool-1-thread-10] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-12 05:08:14,841] [pool-1-thread-10] Initializing /data/christian/20min.oif: [testng] [2024-10-12 05:09:50,615] [pool-1-thread-10] Initializing /data/marc/V0606L.oib: [testng] [2024-10-12 05:10:20,211] [pool-1-thread-3] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-12 05:10:36,848] [pool-1-thread-10] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-12 05:13:03,081] [pool-1-thread-10] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-12 05:13:11,628] [pool-1-thread-10] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-12 05:13:29,825] [pool-1-thread-10] Initializing /data/aryeh/1h.oib: [testng] [2024-10-12 05:13:52,161] [pool-1-thread-10] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-12 05:14:11,655] [pool-1-thread-10] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-12 05:17:41,685] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-12 05:17:49,454] [pool-1-thread-9] Initializing /data/david/Image0016.oib: [testng] [2024-10-12 05:18:09,101] [pool-1-thread-9] Initializing /data/monica/Image0056.oif: [testng] [2024-10-12 05:20:59,630] [pool-1-thread-7] Initializing /data/glen/Image0002.oif: [testng] [2024-10-12 05:21:45,399] [pool-1-thread-9] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-12 05:22:02,445] [pool-1-thread-9] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-12 05:22:18,955] [pool-1-thread-9] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-12 05:22:52,834] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-12 05:23:07,496] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-12 05:23:23,255] [pool-1-thread-9] Initializing /data/johannes/step3.bmp: [testng] [2024-10-12 05:23:30,264] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif: [testng] 05:25:53,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 05:25:53,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:25:53,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-12_05-25-53.log] [testng] 05:25:53,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b22dd81 - End of configuration. [testng] [2024-10-12 05:34:11,749] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-12 05:34:23,148] [pool-1-thread-8] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-12 05:34:35,368] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-12 05:34:49,744] [pool-1-thread-8] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-12 05:35:02,361] [pool-1-thread-8] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-12 05:35:09,601] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-12 05:35:47,590] [pool-1-thread-4] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-12 05:36:30,649] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-12 05:36:44,094] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-12 05:38:43,523] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-12 05:38:56,742] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-12 05:39:09,770] [pool-1-thread-3] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-12 05:39:23,931] [pool-1-thread-3] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-12 05:39:36,627] [pool-1-thread-3] Initializing /data/glen/LUT issue/60x11.oif: [testng] 05:42:31,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 05:42:31,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:42:31,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-12_05-42-31.log] [testng] 05:42:31,012 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4dc2bf5f - End of configuration. [testng] [2024-10-12 05:49:21,700] [pool-1-thread-10] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] 05:50:52,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 05:50:52,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:50:52,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-12_05-50-52.log] [testng] 05:50:52,325 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7df96e36 - End of configuration. [testng] [2024-10-12 05:55:55,163] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-12 05:56:09,803] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-12 05:56:24,589] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-12 05:56:38,504] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-12 05:56:56,994] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-12 05:57:11,276] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-12 05:57:27,601] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-10-12 05:57:44,138] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-12 05:58:04,571] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2024-10-12 05:58:13,424] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-12 06:10:47,269] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-12 06:11:01,312] [pool-1-thread-12] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-12 06:11:16,035] [pool-1-thread-12] Initializing /data/glen/Null file/test no change.oif: [testng] 06:11:27,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:11:27,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:11:27,592 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-12_06-11-27.log] [testng] 06:11:27,592 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c46cb0f - End of configuration. [testng] [2024-10-12 06:13:14,110] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-12 06:13:30,487] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-12 06:13:38,666] [pool-1-thread-11] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-12 06:13:47,799] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-12 06:13:53,189] [pool-1-thread-11] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-12 06:14:03,237] [pool-1-thread-12] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-12 06:14:11,849] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-12 06:15:48,215] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-12 06:16:04,437] [pool-1-thread-7] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-12 06:18:07,185] [pool-1-thread-12] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-12 06:18:08,989] [pool-1-thread-11] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-12 06:18:21,544] [pool-1-thread-12] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-12 06:18:32,578] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-12 06:18:45,690] [pool-1-thread-11] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-12 06:18:50,129] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-12 06:19:04,955] [pool-1-thread-11] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 07:14:30,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 07:14:30,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:14:30,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-12_07-14-30.log] [testng] 07:14:30,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7df24f4e - End of configuration. [testng] 07:21:02,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 07:21:02,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:21:02,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-12_07-21-02.log] [testng] 07:21:02,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40d3c15e - End of configuration. [testng] 07:56:09,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 07:56:09,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:56:09,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-12_07-56-09.log] [testng] 07:56:09,227 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c1cdc32 - End of configuration. [testng] 08:03:37,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 08:03:37,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:03:37,342 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-12_08-03-37.log] [testng] 08:03:37,342 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dea0730 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 355 minutes 40 seconds Finished: SUCCESS