Started by upstream project "BIOFORMATS-test-repo" build number 220 originally caused by: Started by upstream project "Trigger" build number 247 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins16234643862436257448.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_34902_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:55:36,194 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:55:36,196 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 01:55:36,196 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:55:36,197 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:55:36,197 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:55:36,197 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:55:36,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:55:36,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:55:36,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:55:36,198 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:55:36,198 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:55:36,198 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:55:36,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:55:36,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:55:36,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:55:36,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:55:36,450 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:55:36,450 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:55:36,450 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:55:36,451 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:55:36,451 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 01:55:36,452 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 01:55:36,452 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 254 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-14 01:55:36,461] [main] java.version = 1.8.0_342 [testng] 01:55:36,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:55:36,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:36,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-14_01-55-36.log] [testng] 01:55:36,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-14 01:55:36,513] [main] testng.directory = /data [testng] [2024-10-14 01:55:36,513] [main] testng.configDirectory = /config [testng] [2024-10-14 01:55:36,525] [main] testng.multiplier = 1.0 [testng] [2024-10-14 01:55:36,525] [main] testng.in-memory = false [testng] [2024-10-14 01:55:36,525] [main] testng.allow-missing = false [testng] [2024-10-14 01:55:36,525] [main] user.language = fr [testng] [2024-10-14 01:55:36,525] [main] user.country = FR [testng] [2024-10-14 01:55:36,525] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-14 01:56:09,480] [main] ---------------------------------------- [testng] [2024-10-14 01:56:09,480] [main] Total files: 259 [testng] [2024-10-14 01:56:09,480] [main] Scan time: 32.955 s (127 ms/file) [testng] [2024-10-14 01:56:09,480] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-14 02:04:31,455] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 02:04:31,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:04:31,455 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:31,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-14_02-04-31.log] [testng] 02:04:31,456 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78b5c630 - End of configuration. [testng] [2024-10-14 02:04:32,478] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 02:04:32,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:04:32,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:32,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-14_02-04-32.log] [testng] 02:04:32,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d19663a - End of configuration. [testng] [2024-10-14 02:04:32,888] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 02:04:32,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:04:32,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:32,889 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-14_02-04-32.log] [testng] 02:04:32,889 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48d063be - End of configuration. [testng] [2024-10-14 02:04:36,905] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 02:04:36,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:04:36,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:36,906 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-14_02-04-36.log] [testng] 02:04:36,906 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a84acfe - End of configuration. [testng] [2024-10-14 02:04:37,573] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 02:04:37,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:04:37,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:37,574 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-14_02-04-37.log] [testng] 02:04:37,574 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48ab5108 - End of configuration. [testng] [2024-10-14 02:04:37,808] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 02:04:37,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:04:37,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:37,810 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-14_02-04-37.log] [testng] 02:04:37,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f6557de - End of configuration. [testng] [2024-10-14 02:04:38,047] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 02:04:38,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:04:38,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:38,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-14_02-04-38.log] [testng] 02:04:38,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a378d67 - End of configuration. [testng] [2024-10-14 02:04:40,885] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 02:04:40,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:04:40,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:40,886 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-14_02-04-40.log] [testng] 02:04:40,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bb525d8 - End of configuration. [testng] [2024-10-14 02:04:41,151] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 02:04:41,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:04:41,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:41,152 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-14_02-04-41.log] [testng] 02:04:41,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3852c046 - End of configuration. [testng] [2024-10-14 02:04:41,333] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 02:04:41,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:04:41,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:41,334 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-14_02-04-41.log] [testng] 02:04:41,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@566b1051 - End of configuration. [testng] [2024-10-14 02:04:43,826] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 02:04:43,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:04:43,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:43,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-14_02-04-43.log] [testng] 02:04:43,827 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fa13d6d - End of configuration. [testng] [2024-10-14 02:04:44,098] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 02:04:44,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:04:44,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:44,099 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-14_02-04-44.log] [testng] 02:04:44,099 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b1b533 - End of configuration. [testng] [2024-10-14 02:04:48,125] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-14 02:04:48,220] [pool-1-thread-6] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-14 02:04:48,829] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-14 02:04:50,323] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-14 02:04:53,362] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-14 02:04:53,937] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-14 02:04:54,940] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-10-14 02:04:56,122] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-14 02:04:57,226] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-14 02:04:58,515] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-14 02:05:00,403] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-14 02:05:33,521] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2024-10-14 02:05:34,672] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-14 02:05:48,142] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-14 02:05:49,048] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-14 02:05:53,325] [pool-1-thread-9] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-14 02:05:55,017] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-14 02:05:56,649] [pool-1-thread-6] Initializing /data/monica/Image0056.oif: [testng] [2024-10-14 02:05:57,767] [pool-1-thread-5] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-14 02:06:01,382] [pool-1-thread-9] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-14 02:06:03,468] [pool-1-thread-5] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-14 02:06:09,108] [pool-1-thread-3] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-14 02:06:11,747] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-14 02:06:16,942] [pool-1-thread-3] Initializing /data/glen/111407.oif: [testng] [2024-10-14 02:06:22,670] [pool-1-thread-9] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-14 02:06:35,780] [pool-1-thread-5] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-14 02:06:55,670] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-14 02:07:35,363] [pool-1-thread-5] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-14 02:07:41,776] [pool-1-thread-5] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-14 02:07:47,375] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-14 02:07:52,934] [pool-1-thread-5] Initializing /data/glen/Image0002.oif: [testng] [2024-10-14 02:13:56,606] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-14 02:14:01,483] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-14 02:14:07,083] [pool-1-thread-2] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-14 02:16:02,480] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-14 02:16:09,192] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-10-14 02:16:26,189] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-10-14 02:16:57,081] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-14 02:16:59,468] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-14 02:17:08,395] [pool-1-thread-6] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-14 02:17:14,593] [pool-1-thread-6] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-14 02:17:22,728] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-14 02:17:30,261] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-14 02:17:35,961] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] [2024-10-14 02:17:37,857] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-14 02:17:39,667] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-14 02:17:46,670] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-14 02:17:53,294] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-14 02:20:04,973] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-14 02:20:11,082] [pool-1-thread-2] Initializing /data/david/Image0016.oif: [testng] [2024-10-14 02:21:44,387] [pool-1-thread-1] Initializing /data/molly/11OCT2.OIF: [testng] [2024-10-14 02:22:20,387] [pool-1-thread-2] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-14 02:22:29,627] [pool-1-thread-6] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-14 02:22:54,485] [pool-1-thread-6] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-14 02:23:44,057] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-14 02:23:54,133] [pool-1-thread-6] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-14 02:24:01,789] [pool-1-thread-6] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-14 02:24:12,404] [pool-1-thread-6] Initializing /data/karl/Image0009.oib: [testng] [2024-10-14 02:24:17,975] [pool-1-thread-6] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-10-14 02:24:25,816] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-14 02:25:15,454] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-14 02:25:21,371] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-14 02:25:27,044] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-14 02:25:31,755] [pool-1-thread-3] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-14 02:26:28,743] [pool-1-thread-2] Initializing /data/aryeh/1h.oib: [testng] [2024-10-14 02:26:40,333] [pool-1-thread-2] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-14 02:26:48,303] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-14 02:26:56,477] [pool-1-thread-2] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-14 02:27:06,758] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-10-14 02:27:16,124] [pool-1-thread-2] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-14 02:27:23,784] [pool-1-thread-2] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-14 02:27:32,728] [pool-1-thread-2] Initializing /data/simon/never_worked.oib: [testng] [2024-10-14 02:27:40,874] [pool-1-thread-2] Initializing /data/johannes/step1.bmp: [testng] [2024-10-14 02:27:44,947] [pool-1-thread-2] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-14 02:27:55,217] [pool-1-thread-2] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-14 02:28:04,875] [pool-1-thread-2] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-14 02:28:17,565] [pool-1-thread-2] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-14 02:29:23,297] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-14 02:29:32,218] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-14 02:29:40,981] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-14 02:29:45,848] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-14 02:29:51,252] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-14 02:29:56,981] [pool-1-thread-4] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-14 02:30:07,248] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-14 02:30:18,269] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-14 02:30:27,293] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-14 02:30:37,171] [pool-1-thread-4] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-14 02:31:43,052] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-14 02:35:00,198] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-14 02:35:06,970] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2024-10-14 02:35:13,866] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-14 02:35:16,529] [pool-1-thread-5] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-14 02:35:48,826] [pool-1-thread-7] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-14 02:36:00,051] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-14 02:36:19,805] [pool-1-thread-9] Initializing /data/allan/62909#1.oib: [testng] [2024-10-14 02:36:28,839] [pool-1-thread-9] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-14 02:38:59,457] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2024-10-14 02:40:01,878] [pool-1-thread-8] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-14 02:40:09,379] [pool-1-thread-8] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-14 02:43:48,257] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-14 02:43:54,998] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-10-14 02:44:30,194] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-14 02:44:37,181] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-14 02:45:07,894] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-14 02:46:40,984] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-14 02:51:47,206] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-14 02:51:53,636] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-14 02:51:58,031] [pool-1-thread-7] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-14 02:52:03,398] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-14 02:52:06,635] [pool-1-thread-7] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-14 02:52:14,379] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-14 02:52:20,542] [pool-1-thread-7] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-14 03:00:48,320] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-14 03:01:39,663] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-14 03:01:45,242] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-14 03:02:21,617] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-14 03:02:28,393] [pool-1-thread-2] Initializing /data/johannes/step4.bmp: [testng] [2024-10-14 03:02:32,092] [pool-1-thread-2] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-14 03:02:35,522] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-14 03:02:43,854] [pool-1-thread-2] Initializing /data/johannes/step3.bmp: [testng] [2024-10-14 03:02:46,812] [pool-1-thread-2] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-14 03:02:53,536] [pool-1-thread-2] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-14 03:03:11,362] [pool-1-thread-2] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-14 03:03:19,265] [pool-1-thread-6] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-14 03:03:22,507] [pool-1-thread-2] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-14 03:04:26,070] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-14 03:04:30,657] [pool-1-thread-6] Initializing /data/jae/Image0001.oib: [testng] [2024-10-14 03:04:36,121] [pool-1-thread-5] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-14 03:04:39,551] [pool-1-thread-6] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-14 03:05:46,986] [pool-1-thread-5] Initializing /data/marc/V0606L.oib: [testng] [2024-10-14 03:06:04,552] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-14 03:06:12,499] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 03:43:47,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:43:47,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:47,378 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-14_03-43-47.log] [testng] 03:43:47,379 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642eb379 - End of configuration. [testng] 04:24:14,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:24:14,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:24:14,650 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-14_04-24-14.log] [testng] 04:24:14,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@972223a - End of configuration. [testng] 04:33:43,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:33:43,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:33:43,493 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-14_04-33-43.log] [testng] 04:33:43,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ececd11 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 158 minutes 10 seconds Finished: SUCCESS