Started by upstream project "BIOFORMATS-test-repo" build number 220
originally caused by:
Started by upstream project "Trigger" build number 247
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10
[BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins12137012538979445691.sh
+ '[' zeiss-tiff = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_34989_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 05:15:21,494 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 05:15:21,496 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 05:15:21,496 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 05:15:21,497 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 05:15:21,497 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 05:15:21,497 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 05:15:21,498 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 05:15:21,498 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 05:15:21,498 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 05:15:21,499 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 05:15:21,499 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 05:15:21,499 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 05:15:21,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 05:15:21,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 05:15:21,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 05:15:21,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 05:15:21,774 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 05:15:21,774 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 05:15:21,774 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 05:15:21,774 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 05:15:21,774 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 05:15:21,775 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 05:15:21,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 277 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-14 05:15:21,785] [main] java.version = 1.8.0_342
[testng] 05:15:21,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 05:15:21,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:15:21,844 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-14_05-15-21.log]
[testng] 05:15:21,845 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-10-14 05:15:21,847] [main] testng.directory = /data
[testng] [2024-10-14 05:15:21,848] [main] testng.configDirectory = /config
[testng] [2024-10-14 05:15:21,864] [main] testng.multiplier = 1.0
[testng] [2024-10-14 05:15:21,864] [main] testng.in-memory = false
[testng] [2024-10-14 05:15:21,864] [main] testng.allow-missing = false
[testng] [2024-10-14 05:15:21,865] [main] user.language = fr
[testng] [2024-10-14 05:15:21,865] [main] user.country = FR
[testng] [2024-10-14 05:15:21,865] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-10-14 05:17:44,496] [main] ----------------------------------------
[testng] [2024-10-14 05:17:44,496] [main] Total files: 15735
[testng] [2024-10-14 05:17:44,496] [main] Scan time: 142.631 s (9 ms/file)
[testng] [2024-10-14 05:17:44,497] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 125 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-14 05:21:50,581] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif:
[testng] 05:21:50,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 05:21:50,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:21:50,582 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-14_05-21-50.log]
[testng] 05:21:50,583 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67d99d3 - End of configuration.
[testng] [2024-10-14 05:21:51,657] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif:
[testng] 05:21:51,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 05:21:51,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:21:51,658 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-14_05-21-51.log]
[testng] 05:21:51,659 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5233db1 - End of configuration.
[testng] [2024-10-14 05:21:53,086] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif:
[testng] 05:21:53,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 05:21:53,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:21:53,086 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-14_05-21-53.log]
[testng] 05:21:53,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69a0165c - End of configuration.
[testng] [2024-10-14 05:21:54,219] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif:
[testng] 05:21:54,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 05:21:54,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:21:54,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-14_05-21-54.log]
[testng] 05:21:54,220 |-INFO in ch.qos.logback.core.sift.SiftProcessor@209dc99b - End of configuration.
[testng] [2024-10-14 05:21:56,884] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif:
[testng] 05:21:56,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 05:21:56,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:21:56,885 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-14_05-21-56.log]
[testng] 05:21:56,885 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d57c131 - End of configuration.
[testng] [2024-10-14 05:21:58,344] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif:
[testng] 05:21:58,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 05:21:58,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:21:58,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-14_05-21-58.log]
[testng] 05:21:58,345 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73c1b169 - End of configuration.
[testng] [2024-10-14 05:21:59,461] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif:
[testng] 05:21:59,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 05:21:59,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:21:59,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-14_05-21-59.log]
[testng] 05:21:59,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75d5dedf - End of configuration.
[testng] [2024-10-14 05:22:00,889] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif:
[testng] 05:22:00,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 05:22:00,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:22:00,889 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-14_05-22-00.log]
[testng] 05:22:00,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55306d8f - End of configuration.
[testng] [2024-10-14 05:22:02,277] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif:
[testng] 05:22:02,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 05:22:02,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:22:02,277 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-14_05-22-02.log]
[testng] 05:22:02,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@270f40e8 - End of configuration.
[testng] [2024-10-14 05:22:04,795] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif:
[testng] 05:22:04,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 05:22:04,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:22:04,796 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-14_05-22-04.log]
[testng] 05:22:04,796 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d5097e9 - End of configuration.
[testng] [2024-10-14 05:22:06,401] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif:
[testng] 05:22:06,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 05:22:06,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:22:06,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-14_05-22-06.log]
[testng] 05:22:06,402 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d840338 - End of configuration.
[testng] [2024-10-14 05:22:08,265] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif:
[testng] 05:22:08,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 05:22:08,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:22:08,265 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-14_05-22-08.log]
[testng] 05:22:08,266 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71d522c6 - End of configuration.
[testng] [2024-10-14 05:22:36,771] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif:
[testng] [2024-10-14 05:22:38,373] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif:
[testng] [2024-10-14 05:22:40,451] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif:
[testng] [2024-10-14 05:22:42,335] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif:
[testng] [2024-10-14 05:23:10,206] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif:
[testng] [2024-10-14 05:23:16,413] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif:
[testng] [2024-10-14 05:23:41,091] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif:
[testng] [2024-10-14 05:23:54,657] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif:
[testng] [2024-10-14 05:24:00,013] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif:
[testng] [2024-10-14 05:25:47,135] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif:
[testng] [2024-10-14 05:26:15,717] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif:
[testng] [2024-10-14 05:26:22,167] [pool-1-thread-4] Initializing /data/converted/rolf/example_1-2010_11_25.tif:
[testng] [2024-10-14 05:26:24,243] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif:
[testng] [2024-10-14 05:26:49,442] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif:
[testng] [2024-10-14 05:27:00,194] [pool-1-thread-4] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif:
[testng] [2024-10-14 05:27:14,828] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif:
[testng] [2024-10-14 05:27:20,700] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0001a.tif:
[testng] [2024-10-14 05:27:33,850] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif:
[testng] [2024-10-14 05:27:48,826] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif:
[testng] [2024-10-14 05:29:24,907] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif:
[testng] [2024-10-14 05:29:43,805] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif:
[testng] [2024-10-14 05:29:49,359] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif:
[testng] [2024-10-14 05:30:02,817] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif:
[testng] [2024-10-14 05:30:12,236] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif:
[testng] [2024-10-14 05:30:13,795] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0004.tif:
[testng] [2024-10-14 05:31:02,309] [pool-1-thread-10] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif:
[testng] [2024-10-14 05:32:28,537] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif:
[testng] [2024-10-14 05:33:45,375] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif:
[testng] [2024-10-14 05:35:07,130] [pool-1-thread-2] Initializing /data/converted/othmar/z-stack.tif:
[testng] [2024-10-14 05:35:29,421] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif:
[testng] [2024-10-14 05:36:52,856] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif:
[testng] [2024-10-14 05:37:13,965] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif:
[testng] [2024-10-14 05:37:29,972] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif:
[testng] [2024-10-14 05:37:55,942] [pool-1-thread-4] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif:
[testng] [2024-10-14 05:38:47,756] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif:
[testng] [2024-10-14 05:39:34,067] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif:
[testng] [2024-10-14 05:40:19,386] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif:
[testng] [2024-10-14 05:40:22,775] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif:
[testng] [2024-10-14 05:40:36,233] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif:
[testng] [2024-10-14 05:41:13,620] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif:
[testng] [2024-10-14 05:47:17,523] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif:
[testng] [2024-10-14 05:48:19,664] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif:
[testng] [2024-10-14 05:52:15,965] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif:
[testng] [2024-10-14 05:52:45,255] [pool-1-thread-5] Initializing /data/converted/karsten/Bild2.tif:
[testng] [2024-10-14 05:53:03,847] [pool-1-thread-10] Initializing /data/converted/miso/Aufnahme-184058-0002.tif:
[testng] [2024-10-14 05:53:15,295] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif:
[testng] [2024-10-14 05:53:43,813] [pool-1-thread-5] Initializing /data/converted/converted/2chzt.tif:
[testng] [2024-10-14 05:53:48,449] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif:
[testng] [2024-10-14 05:57:31,506] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif:
[testng] [2024-10-14 06:03:14,164] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif:
[testng] [2024-10-14 06:03:59,483] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif:
[testng] [2024-10-14 06:05:21,321] [pool-1-thread-4] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif:
[testng] [2024-10-14 06:07:10,750] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif:
[testng] [2024-10-14 06:07:56,092] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif:
[testng] [2024-10-14 06:08:56,790] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif:
[testng] [2024-10-14 06:11:45,520] [pool-1-thread-2] Initializing /data/converted/stephan/notok2.tif:
[testng] [2024-10-14 06:13:47,312] [pool-1-thread-10] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif:
[testng] [2024-10-14 06:14:01,187] [pool-1-thread-3] Initializing /data/converted/karsten/247096n3s3s9.tif:
[testng] [2024-10-14 06:15:49,055] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif:
[testng] [2024-10-14 06:18:11,896] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif:
[testng] [2024-10-14 06:21:29,754] [pool-1-thread-8] Initializing /data/converted/michel/c.tif:
[testng] [2024-10-14 06:21:32,648] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif:
[testng] [2024-10-14 06:22:41,524] [pool-1-thread-8] Initializing /data/converted/rolf/example_2-2010_11_25.tif:
[testng] [2024-10-14 06:23:17,710] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif:
[testng] [2024-10-14 06:23:39,226] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif:
[testng] [2024-10-14 06:23:42,054] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif:
[testng] [2024-10-14 06:24:46,405] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif:
[testng] [2024-10-14 06:25:02,712] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif:
[testng] [2024-10-14 06:26:16,883] [pool-1-thread-10] Initializing /data/converted/michel/e.tif:
[testng] [2024-10-14 06:26:34,184] [pool-1-thread-9] Initializing /data/converted/nicolas/image.tif:
[testng] [2024-10-14 06:27:21,396] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif:
[testng] [2024-10-14 06:28:03,320] [pool-1-thread-10] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif:
[testng] [2024-10-14 06:29:08,442] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif:
[testng] [2024-10-14 06:29:46,278] [pool-1-thread-2] Initializing /data/converted/markus/30channels_exposure-series.tif:
[testng] [2024-10-14 06:34:03,391] [pool-1-thread-2] Initializing /data/converted/david/snap-181518-0001.tif:
[testng] [2024-10-14 06:34:51,204] [pool-1-thread-2] Initializing /data/converted/strand/2Colors1Plane.tif:
[testng] [2024-10-14 06:36:17,910] [pool-1-thread-3] Initializing /data/converted/darren/section0001_w1.tif:
[testng] [2024-10-14 06:36:21,217] [pool-1-thread-11] Initializing /data/converted/eirinn/demo-tile.tif:
[testng] [2024-10-14 06:36:27,146] [pool-1-thread-2] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif:
[testng] [2024-10-14 06:36:52,385] [pool-1-thread-4] Initializing /data/converted/michel/a.tif:
[testng] [2024-10-14 06:37:03,223] [pool-1-thread-3] Initializing /data/converted/rachel/40K 30s A1.tif:
[testng] [2024-10-14 06:37:24,450] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009_0022.tif:
[testng] [2024-10-14 06:37:32,357] [pool-1-thread-4] Initializing /data/converted/converted/damian-compressed.tif:
[testng] [2024-10-14 06:37:40,080] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif:
[testng] [2024-10-14 06:38:00,761] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif:
[testng] [2024-10-14 06:38:04,158] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif:
[testng] [2024-10-14 06:38:20,262] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif:
[testng] [2024-10-14 06:38:49,043] [pool-1-thread-8] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif:
[testng] [2024-10-14 06:38:59,919] [pool-1-thread-3] Initializing /data/converted/susan/BY4741NQ2.tif:
[testng] [2024-10-14 06:39:46,007] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif:
[testng] [2024-10-14 06:39:54,609] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif:
[testng] [2024-10-14 06:40:27,699] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif:
[testng] [2024-10-14 06:42:10,735] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif:
[testng] [2024-10-14 06:43:18,464] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif:
[testng] [2024-10-14 06:50:05,561] [pool-1-thread-3] Initializing /data/converted/michel/b.tif:
[testng] [2024-10-14 06:50:20,033] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif:
[testng] [2024-10-14 06:51:05,539] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif:
[testng] 06:51:42,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 06:51:42,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:51:42,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-14_06-51-42.log]
[testng] 06:51:42,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d989a90 - End of configuration.
[testng] [2024-10-14 06:51:47,765] [pool-1-thread-4] Initializing /data/converted/michel/d.tif:
[testng] [2024-10-14 06:52:02,927] [pool-1-thread-2] Initializing /data/dorai/F_ZImage10_(X10)_C.tif:
[testng] [2024-10-14 06:52:19,211] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif:
[testng] [2024-10-14 06:52:41,423] [pool-1-thread-4] Initializing /data/converted/markus/Mouse-newborn-panorama.tif:
[testng] [2024-10-14 06:52:54,168] [pool-1-thread-2] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif:
[testng] [2024-10-14 06:53:10,909] [pool-1-thread-2] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif:
[testng] [2024-10-14 06:53:35,476] [pool-1-thread-9] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif:
[testng] [2024-10-14 06:53:42,201] [pool-1-thread-5] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif:
[testng] [2024-10-14 06:53:48,918] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif:
[testng] [2024-10-14 06:54:03,374] [pool-1-thread-8] Initializing /data/converted/stephan/notok1.tif:
[testng] [2024-10-14 06:54:21,275] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif:
[testng] [2024-10-14 06:54:33,257] [pool-1-thread-11] Initializing /data/scott/Slide133-08.tif:
[testng] [2024-10-14 06:54:58,973] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif:
[testng] [2024-10-14 06:55:14,086] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif:
[testng] [2024-10-14 06:55:53,500] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif:
[testng] [2024-10-14 06:56:08,372] [pool-1-thread-11] Initializing /data/converted/lior/live+cf5b.tif:
[testng] 07:45:35,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 07:45:35,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:45:35,157 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-14_07-45-35.log]
[testng] 07:45:35,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@558b3ba7 - End of configuration.
[testng] 07:48:32,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 07:48:32,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:48:32,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-14_07-48-32.log]
[testng] 07:48:32,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b85fc - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 6625, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 153 minutes 14 seconds
Finished: SUCCESS