Started by upstream project "BIOFORMATS-test-repo" build number 221
originally caused by:
Started by upstream project "Trigger" build number 248
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins18102232899954228718.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_35035_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:31:27,522 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:31:27,524 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 01:31:27,524 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:31:27,525 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:31:27,525 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:31:27,526 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:31:27,526 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:31:27,526 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:31:27,527 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:31:27,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:31:27,528 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:31:27,528 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:31:27,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:31:27,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:31:27,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:31:27,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:31:27,727 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:31:27,727 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:31:27,727 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:31:27,728 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:31:27,728 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 01:31:27,729 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 01:31:27,729 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 202 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-15 01:31:27,737] [main] java.version = 11.0.16
[testng] 01:31:27,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:31:27,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:27,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-15_01-31-27.log]
[testng] 01:31:27,785 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-10-15 01:31:27,787] [main] testng.directory = /data
[testng] [2024-10-15 01:31:27,787] [main] testng.configDirectory = /config
[testng] [2024-10-15 01:31:27,797] [main] testng.multiplier = 1.0
[testng] [2024-10-15 01:31:27,798] [main] testng.in-memory = false
[testng] [2024-10-15 01:31:27,798] [main] testng.allow-missing = false
[testng] [2024-10-15 01:31:27,798] [main] user.language = en
[testng] [2024-10-15 01:31:27,798] [main] user.country = ${user.country}
[testng] [2024-10-15 01:31:27,799] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-15 01:32:48,762] [main] ----------------------------------------
[testng] [2024-10-15 01:32:48,762] [main] Total files: 315
[testng] [2024-10-15 01:32:48,762] [main] Scan time: 80.963 s (257 ms/file)
[testng] [2024-10-15 01:32:48,762] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 192 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-15 01:57:28,317] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] 01:57:28,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:57:28,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:28,320 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-15_01-57-28.log]
[testng] 01:57:28,321 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d62c8f9 - End of configuration.
[testng] [2024-10-15 01:57:30,075] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 01:57:30,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:57:30,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:30,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-15_01-57-30.log]
[testng] 01:57:30,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b0643a4 - End of configuration.
[testng] [2024-10-15 01:57:32,855] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] 01:57:32,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:57:32,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:32,856 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-15_01-57-32.log]
[testng] 01:57:32,856 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76ed132c - End of configuration.
[testng] [2024-10-15 01:57:34,009] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] 01:57:34,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:57:34,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:34,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-15_01-57-34.log]
[testng] 01:57:34,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76e0db0b - End of configuration.
[testng] [2024-10-15 01:57:36,829] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] 01:57:36,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:57:36,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:36,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-15_01-57-36.log]
[testng] 01:57:36,830 |-INFO in ch.qos.logback.core.sift.SiftProcessor@386de963 - End of configuration.
[testng] [2024-10-15 01:57:37,996] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] 01:57:37,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:57:37,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:37,997 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-15_01-57-37.log]
[testng] 01:57:37,998 |-INFO in ch.qos.logback.core.sift.SiftProcessor@758b8cbc - End of configuration.
[testng] [2024-10-15 01:57:40,044] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] 01:57:40,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:57:40,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:40,045 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-15_01-57-40.log]
[testng] 01:57:40,046 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67c84dc2 - End of configuration.
[testng] [2024-10-15 01:57:44,090] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] 01:57:44,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:57:44,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:44,091 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-15_01-57-44.log]
[testng] 01:57:44,091 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21dcd91b - End of configuration.
[testng] [2024-10-15 01:57:47,007] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] 01:57:47,007 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:57:47,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:47,008 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-15_01-57-47.log]
[testng] 01:57:47,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d81323e - End of configuration.
[testng] [2024-10-15 01:57:48,575] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] 01:57:48,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:57:48,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:48,576 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-15_01-57-48.log]
[testng] 01:57:48,576 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57d9dbd3 - End of configuration.
[testng] [2024-10-15 01:57:50,562] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] 01:57:50,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:57:50,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:50,563 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-15_01-57-50.log]
[testng] 01:57:50,563 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55da31d9 - End of configuration.
[testng] [2024-10-15 01:57:53,721] [pool-1-thread-2] Initializing /data/qa-17270/image1.oir:
[testng] 01:57:53,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:57:53,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:53,721 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-15_01-57-53.log]
[testng] 01:57:53,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2142f43e - End of configuration.
[testng] [2024-10-15 01:58:04,214] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-10-15 01:58:11,354] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-10-15 01:58:13,742] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-10-15 01:58:20,795] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-10-15 01:58:23,403] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-10-15 01:58:27,329] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-10-15 01:58:30,889] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-10-15 01:58:34,713] [pool-1-thread-7] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-10-15 01:58:34,767] [pool-1-thread-1] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-10-15 01:58:36,451] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-10-15 01:58:44,067] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-10-15 01:58:50,201] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-10-15 01:58:54,645] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-10-15 01:58:57,081] [pool-1-thread-4] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2024-10-15 01:59:03,665] [pool-1-thread-8] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-10-15 01:59:11,183] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-10-15 01:59:12,987] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-10-15 01:59:14,429] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-10-15 01:59:18,538] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-10-15 01:59:24,422] [pool-1-thread-9] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-10-15 01:59:33,657] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-10-15 01:59:37,975] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-10-15 01:59:43,445] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-10-15 01:59:49,075] [pool-1-thread-6] Initializing /data/olympus/XYZt.oir:
[testng] [2024-10-15 01:59:51,430] [pool-1-thread-7] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-10-15 01:59:57,031] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-10-15 02:00:06,217] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-10-15 02:00:10,736] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-10-15 02:00:13,801] [pool-1-thread-7] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-10-15 02:00:17,482] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-10-15 02:00:31,266] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-10-15 02:00:33,887] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-10-15 02:00:38,000] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-10-15 02:00:40,172] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-10-15 02:00:42,357] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-10-15 02:00:55,142] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-10-15 02:00:59,437] [pool-1-thread-6] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-10-15 02:01:02,402] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-10-15 02:01:04,631] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-10-15 02:01:13,981] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-10-15 02:01:21,265] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-10-15 02:01:29,874] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-10-15 02:01:53,084] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-10-15 02:01:59,948] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-10-15 02:02:06,040] [pool-1-thread-4] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-10-15 02:02:44,974] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-10-15 02:02:49,104] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-10-15 02:02:54,816] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-10-15 02:03:04,979] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-10-15 02:03:10,215] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-10-15 02:03:15,543] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-10-15 02:03:18,731] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-10-15 02:03:28,175] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-10-15 02:03:33,890] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-10-15 02:03:42,283] [pool-1-thread-6] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2024-10-15 02:03:46,396] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-10-15 02:04:01,087] [pool-1-thread-1] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-10-15 02:04:14,008] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-10-15 02:04:17,146] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-10-15 02:04:27,185] [pool-1-thread-10] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-10-15 02:04:32,140] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-10-15 02:04:41,928] [pool-1-thread-2] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-10-15 02:04:50,911] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-10-15 02:05:04,717] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-10-15 02:05:08,970] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-10-15 02:05:13,563] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-10-15 02:05:17,862] [pool-1-thread-2] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-10-15 02:05:19,178] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-10-15 02:05:29,683] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-10-15 02:05:38,525] [pool-1-thread-10] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-10-15 02:05:41,500] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-10-15 02:05:45,718] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-10-15 02:05:49,202] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-10-15 02:05:51,680] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-10-15 02:06:02,557] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-10-15 02:06:05,007] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-10-15 02:06:08,389] [pool-1-thread-1] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-10-15 02:06:10,693] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-10-15 02:06:13,246] [pool-1-thread-2] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-10-15 02:06:15,132] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-10-15 02:06:25,784] [pool-1-thread-10] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-10-15 02:06:30,551] [pool-1-thread-9] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2024-10-15 02:06:32,371] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-10-15 02:06:34,700] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-10-15 02:06:40,633] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-10-15 02:06:47,272] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-10-15 02:06:48,846] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-10-15 02:06:52,331] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-10-15 02:06:57,720] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-10-15 02:07:00,918] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-10-15 02:07:11,704] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-10-15 02:07:14,122] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-10-15 02:07:15,509] [pool-1-thread-1] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-10-15 02:08:19,330] [pool-1-thread-4] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir:
[testng] [2024-10-15 02:08:24,146] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-10-15 02:08:28,836] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-10-15 02:08:33,070] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-10-15 02:08:36,036] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-10-15 02:08:40,209] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-10-15 02:08:53,100] [pool-1-thread-11] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] [2024-10-15 02:08:57,230] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-10-15 02:08:59,829] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-10-15 02:09:02,233] [pool-1-thread-8] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-10-15 02:09:05,760] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-10-15 02:09:14,737] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-10-15 02:09:29,138] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-10-15 02:09:33,561] [pool-1-thread-11] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-10-15 02:09:37,171] [pool-1-thread-10] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir:
[testng] [2024-10-15 02:09:39,820] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-10-15 02:09:51,980] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-10-15 02:10:05,188] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-10-15 02:10:11,726] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-10-15 02:10:13,974] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-10-15 02:10:16,309] [pool-1-thread-11] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-10-15 02:10:26,526] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-10-15 02:10:30,688] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-10-15 02:10:33,553] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-10-15 02:10:44,463] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-10-15 02:10:48,625] [pool-1-thread-11] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-10-15 02:10:51,467] [pool-1-thread-8] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-10-15 02:10:59,860] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-10-15 02:11:04,706] [pool-1-thread-4] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-10-15 02:11:10,823] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-10-15 02:11:14,396] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-10-15 02:11:20,496] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-10-15 02:11:26,743] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-10-15 02:11:28,504] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-10-15 02:11:32,084] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-10-15 02:11:37,097] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-10-15 02:11:47,314] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-10-15 02:11:49,086] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-10-15 02:11:54,882] [pool-1-thread-10] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-10-15 02:11:55,318] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-10-15 02:11:58,206] [pool-1-thread-8] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-10-15 02:12:09,880] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-10-15 02:12:17,560] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-10-15 02:12:18,835] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-10-15 02:12:22,674] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-10-15 02:12:24,933] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-10-15 02:12:35,791] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-10-15 02:12:42,480] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-10-15 02:12:44,491] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-10-15 02:12:47,150] [pool-1-thread-4] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-10-15 02:12:55,926] [pool-1-thread-11] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-10-15 02:12:57,990] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-10-15 02:13:07,086] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-10-15 02:13:11,062] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-10-15 02:13:13,606] [pool-1-thread-3] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-10-15 02:13:19,197] [pool-1-thread-11] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-10-15 02:13:27,542] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-10-15 02:13:33,219] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-10-15 02:13:37,893] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-10-15 02:13:41,855] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-10-15 02:13:49,405] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-10-15 02:13:57,115] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-10-15 02:14:03,194] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-10-15 02:14:18,981] [pool-1-thread-3] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info:
[testng] [2024-10-15 02:14:31,461] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-10-15 02:14:34,902] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-10-15 02:14:37,595] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-10-15 02:14:39,564] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-10-15 02:14:52,672] [pool-1-thread-8] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-10-15 02:14:55,239] [pool-1-thread-10] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-10-15 02:14:57,349] [pool-1-thread-11] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-10-15 02:15:02,395] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-10-15 02:15:10,601] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-10-15 02:15:16,716] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-10-15 02:15:26,985] [pool-1-thread-2] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-10-15 02:15:31,386] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-10-15 02:15:33,575] [pool-1-thread-8] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-10-15 02:15:36,856] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-10-15 02:15:46,805] [pool-1-thread-4] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-10-15 02:15:50,453] [pool-1-thread-2] Initializing /data/qa-17335/1.oir:
[testng] [2024-10-15 02:15:54,390] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-10-15 02:16:04,456] [pool-1-thread-8] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-10-15 02:16:06,104] [pool-1-thread-5] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-10-15 02:16:07,860] [pool-1-thread-2] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-10-15 02:16:27,947] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-10-15 02:16:31,208] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-10-15 02:16:39,496] [pool-1-thread-11] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 10176, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 75 minutes 38 seconds
Finished: SUCCESS