Started by upstream project "BIOFORMATS-test-repo" build number 222
originally caused by:
Started by upstream project "Trigger" build number 249
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins18305020571118184822.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_35191_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:21:48,566 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:48,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 01:21:48,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:48,569 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:48,569 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:48,570 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:48,570 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:48,570 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:48,571 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:48,572 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:48,573 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:48,573 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:48,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:48,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:48,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:48,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:48,788 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:48,788 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:48,788 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:48,789 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:48,789 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 01:21:48,790 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 01:21:48,790 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 219 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-16 01:21:48,799] [main] java.version = 17.0.2
[testng] 01:21:48,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:48,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,859 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-16_01-21-48.log]
[testng] 01:21:48,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-10-16 01:21:48,870] [main] testng.directory = /data
[testng] [2024-10-16 01:21:48,870] [main] testng.configDirectory = /config
[testng] [2024-10-16 01:21:48,879] [main] testng.multiplier = 1.0
[testng] [2024-10-16 01:21:48,880] [main] testng.in-memory = false
[testng] [2024-10-16 01:21:48,880] [main] testng.allow-missing = false
[testng] [2024-10-16 01:21:48,880] [main] user.language = en
[testng] [2024-10-16 01:21:48,880] [main] user.country = ${user.country}
[testng] [2024-10-16 01:21:48,880] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-16 01:22:06,649] [main] ----------------------------------------
[testng] [2024-10-16 01:22:06,649] [main] Total files: 103
[testng] [2024-10-16 01:22:06,649] [main] Scan time: 17.769 s (172 ms/file)
[testng] [2024-10-16 01:22:06,649] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-16 01:23:28,231] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] 01:23:28,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:23:28,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:28,232 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-16_01-23-28.log]
[testng] 01:23:28,233 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bdc955d - End of configuration.
[testng] [2024-10-16 01:23:30,335] [pool-1-thread-12] Initializing /data/melissa/annotation-test.tif:
[testng] 01:23:30,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:23:30,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:30,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-16_01-23-30.log]
[testng] 01:23:30,338 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d06f91a - End of configuration.
[testng] [2024-10-16 01:23:32,143] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] 01:23:32,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:23:32,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:32,145 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-16_01-23-32.log]
[testng] 01:23:32,145 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b76fa6 - End of configuration.
[testng] [2024-10-16 01:23:32,445] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] 01:23:32,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:23:32,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:32,446 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-16_01-23-32.log]
[testng] 01:23:32,446 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58cb74a6 - End of configuration.
[testng] [2024-10-16 01:23:32,807] [pool-1-thread-9] Initializing /data/jay/dnasample1.dm3:
[testng] 01:23:32,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:23:32,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:32,808 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-16_01-23-32.log]
[testng] 01:23:32,808 |-INFO in ch.qos.logback.core.sift.SiftProcessor@576c5984 - End of configuration.
[testng] [2024-10-16 01:23:33,102] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] 01:23:33,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:23:33,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:33,103 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-16_01-23-33.log]
[testng] 01:23:33,103 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71ffcdda - End of configuration.
[testng] [2024-10-16 01:23:35,147] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] 01:23:35,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:23:35,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:35,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-16_01-23-35.log]
[testng] 01:23:35,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15d1621 - End of configuration.
[testng] [2024-10-16 01:23:35,406] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] 01:23:35,407 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:23:35,407 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:35,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-16_01-23-35.log]
[testng] 01:23:35,408 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77c0b2f1 - End of configuration.
[testng] [2024-10-16 01:23:35,723] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] 01:23:35,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:23:35,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:35,724 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-16_01-23-35.log]
[testng] 01:23:35,725 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e8e3637 - End of configuration.
[testng] [2024-10-16 01:23:37,467] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3:
[testng] 01:23:37,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:23:37,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:37,468 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-16_01-23-37.log]
[testng] 01:23:37,469 |-INFO in ch.qos.logback.core.sift.SiftProcessor@129520eb - End of configuration.
[testng] [2024-10-16 01:23:37,676] [pool-1-thread-3] Initializing /data/jay/biosamplefullframe.dm3:
[testng] 01:23:37,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:23:37,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:37,677 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-16_01-23-37.log]
[testng] 01:23:37,678 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39200458 - End of configuration.
[testng] [2024-10-16 01:23:37,909] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] 01:23:37,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:23:37,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:37,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-16_01-23-37.log]
[testng] 01:23:37,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63a67831 - End of configuration.
[testng] [2024-10-16 01:23:45,015] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-16 01:23:48,637] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-10-16 01:23:49,138] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-10-16 01:23:51,097] [pool-1-thread-3] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-10-16 01:23:51,573] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-10-16 01:23:52,363] [pool-1-thread-9] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-10-16 01:23:52,856] [pool-1-thread-11] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-10-16 01:24:00,803] [pool-1-thread-7] Initializing /data/jay/camtest1.dm3:
[testng] [2024-10-16 01:24:02,496] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-10-16 01:24:02,864] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-10-16 01:24:03,303] [pool-1-thread-3] Initializing /data/jay/dnasample.tif:
[testng] [2024-10-16 01:24:05,498] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-10-16 01:24:07,354] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-10-16 01:24:07,951] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-10-16 01:24:11,660] [pool-1-thread-9] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-10-16 01:24:12,677] [pool-1-thread-2] Initializing /data/qa-7642/8.dm4:
[testng] [2024-10-16 01:24:14,073] [pool-1-thread-10] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-10-16 01:24:14,667] [pool-1-thread-6] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-10-16 01:24:19,030] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-10-16 01:24:19,792] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-10-16 01:24:20,396] [pool-1-thread-4] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-10-16 01:24:20,946] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-10-16 01:24:21,557] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-10-16 01:24:22,799] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-10-16 01:24:28,042] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-10-16 01:24:28,589] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-10-16 01:24:29,676] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-10-16 01:24:32,836] [pool-1-thread-1] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-10-16 01:24:33,308] [pool-1-thread-12] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-10-16 01:24:34,011] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-10-16 01:24:36,301] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-10-16 01:24:39,771] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-10-16 01:24:40,371] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-10-16 01:24:41,761] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-10-16 01:24:42,614] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-10-16 01:24:45,564] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-10-16 01:24:46,299] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-10-16 01:24:48,319] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-10-16 01:24:51,304] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-10-16 01:24:54,136] [pool-1-thread-2] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-10-16 01:24:54,806] [pool-1-thread-7] Initializing /data/qa-21761/example.dm4:
[testng] [2024-10-16 01:24:55,877] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-10-16 01:24:58,558] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-10-16 01:25:00,274] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-10-16 01:25:03,641] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-10-16 01:25:05,500] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-10-16 01:25:07,043] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-10-16 01:25:07,737] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-10-16 01:25:08,446] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-16 01:25:10,800] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-10-16 01:25:11,288] [pool-1-thread-11] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-10-16 01:25:11,706] [pool-1-thread-4] Initializing /data/jay/Carbon.34.dm3:
[testng] [2024-10-16 01:25:12,793] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-10-16 01:25:13,545] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-10-16 01:25:15,720] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-10-16 01:25:17,342] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-10-16 01:25:17,882] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-10-16 01:25:19,891] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-16 01:25:22,559] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-10-16 01:25:23,022] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-10-16 01:25:23,905] [pool-1-thread-9] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-10-16 01:25:24,639] [pool-1-thread-11] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-10-16 01:25:25,865] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-10-16 01:25:26,543] [pool-1-thread-4] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-10-16 01:25:27,852] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-10-16 01:25:30,368] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-10-16 01:25:32,118] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-10-16 01:25:32,937] [pool-1-thread-1] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-10-16 01:25:33,719] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-10-16 01:25:34,817] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-10-16 01:25:36,283] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-10-16 01:25:37,371] [pool-1-thread-6] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-10-16 01:25:38,683] [pool-1-thread-10] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-10-16 01:25:39,549] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-10-16 01:25:40,251] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-16 01:25:44,338] [pool-1-thread-1] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-10-16 01:25:44,875] [pool-1-thread-8] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-10-16 01:25:45,527] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-10-16 01:25:47,720] [pool-1-thread-7] Initializing /data/jay/DMtest.dm3:
[testng] [2024-10-16 01:25:48,211] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-10-16 01:25:48,710] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-10-16 01:25:51,688] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-10-16 01:25:52,625] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-10-16 01:25:54,317] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-10-16 01:25:55,263] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-10-16 01:25:55,823] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 4 minutes 32 seconds
Finished: SUCCESS